RNA–Protein interactions for RNA: ENST00000511754.5

TNPO1-208, Transcript of transportin 1, human

TSL 5

Gene TNPO1, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TNPO1-208	ENST00000511754	SLC18B1	Q6NT16	456 aa		4.19	□□□□□ -1.74
TNPO1-208	ENST00000511754	C11orf87	Q6NUJ2	197 aa		4.19	□□□□□ -1.74
TNPO1-208	ENST00000511754	PARS2	Q7L3T8	475 aa	Known RBP	4.19	□□□□□ -1.74
TNPO1-208	ENST00000511754	MAVS	Q7Z434	540 aa		4.19	□□□□□ -1.74
TNPO1-208	ENST00000511754	DENND1A	Q8TEH3	1009 aa		4.19	□□□□□ -1.74
TNPO1-208	ENST00000511754	REPS1	Q96D71	796 aa		4.19	□□□□□ -1.74
TNPO1-208	ENST00000511754	MTFMT	Q96DP5	389 aa	Known RBP	4.19	□□□□□ -1.74
TNPO1-208	ENST00000511754	GLOD4	Q9HC38	313 aa		4.19	□□□□□ -1.74
TNPO1-208	ENST00000511754	SARS2	Q9NP81	518 aa	Known RBP	4.19	□□□□□ -1.74
TNPO1-208	ENST00000511754	DUSP22	Q9NRW4	184 aa		4.19	□□□□□ -1.74
TNPO1-208	ENST00000511754	BTBD3	Q9Y2F9	522 aa		4.19	□□□□□ -1.74
TNPO1-208	ENST00000511754	TBC1D30	Q9Y2I9	924 aa		4.19	□□□□□ -1.74
TNPO1-208	ENST00000511754	ZNF521	Q96K83	1311 aa		4.19	□□□□□ -1.74
TNPO1-208	ENST00000511754	TISP43	B9A030	160 aa		4.18	□□□□□ -1.74
TNPO1-208	ENST00000511754	ZNF213	O14771	459 aa		4.18	□□□□□ -1.74
TNPO1-208	ENST00000511754	DNAJB5	O75953	348 aa		4.18	□□□□□ -1.74
TNPO1-208	ENST00000511754	FES	P07332	822 aa		4.18	□□□□□ -1.74
TNPO1-208	ENST00000511754	HOXB6	P17509	224 aa	Known RBP	4.18	□□□□□ -1.74
TNPO1-208	ENST00000511754	VCAM1	P19320	739 aa		4.18	□□□□□ -1.74
TNPO1-208	ENST00000511754	LIPA	P38571	399 aa		4.18	□□□□□ -1.74
TNPO1-208	ENST00000511754	CLCN2	P51788	898 aa		4.18	□□□□□ -1.74
TNPO1-208	ENST00000511754	ZNF134	P52741	427 aa		4.18	□□□□□ -1.74
TNPO1-208	ENST00000511754	E2F2	Q14209	437 aa		4.18	□□□□□ -1.74
TNPO1-208	ENST00000511754	ETFDH	Q16134	617 aa		4.18	□□□□□ -1.74
TNPO1-208	ENST00000511754	EMC10	Q5UCC4	262 aa		4.18	□□□□□ -1.74
TNPO1-208	ENST00000511754	ZNF66	Q6ZN08	573 aa		4.18	□□□□□ -1.74
TNPO1-208	ENST00000511754	RP9	Q8TA86	221 aa	Known RBP	4.18	□□□□□ -1.74
TNPO1-208	ENST00000511754	HSPBAP1	Q96EW2	488 aa		4.18	□□□□□ -1.74
TNPO1-208	ENST00000511754	SLC35A4	Q96G79	324 aa		4.18	□□□□□ -1.74
TNPO1-208	ENST00000511754	CDK5RAP3	Q96JB5	506 aa		4.18	□□□□□ -1.74
TNPO1-208	ENST00000511754	KRTAP2-2	Q9BYT5	123 aa		4.18	□□□□□ -1.74
TNPO1-208	ENST00000511754	ASPSCR1	Q9BZE9	553 aa		4.18	□□□□□ -1.74
TNPO1-208	ENST00000511754	SHOC2	Q9UQ13	582 aa		4.18	□□□□□ -1.74
TNPO1-208	ENST00000511754	LUC7L2	Q9Y383	392 aa	Known RBP	4.18	□□□□□ -1.74
TNPO1-208	ENST00000511754	PLEKHM1	Q9Y4G2	1056 aa		4.18	□□□□□ -1.74
TNPO1-208	ENST00000511754	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	4.18	□□□□□ -1.74
TNPO1-208	ENST00000511754		A1L4Q6	167 aa		4.17	□□□□□ -1.74
TNPO1-208	ENST00000511754	MYO1C	O00159	1063 aa		4.17	□□□□□ -1.74
TNPO1-208	ENST00000511754	TP73	O15350	636 aa		4.17	□□□□□ -1.74
TNPO1-208	ENST00000511754	UNC5C	O95185	931 aa		4.17	□□□□□ -1.74
TNPO1-208	ENST00000511754	IGKV2-30	P06310	120 aa		4.17	□□□□□ -1.74
TNPO1-208	ENST00000511754	GRP	P07492	148 aa		4.17	□□□□□ -1.74
TNPO1-208	ENST00000511754	DLD	P09622	509 aa	Known RBP	4.17	□□□□□ -1.74
TNPO1-208	ENST00000511754	AKAP5	P24588	427 aa		4.17	□□□□□ -1.74
TNPO1-208	ENST00000511754	MMP13	P45452	471 aa		4.17	□□□□□ -1.74
TNPO1-208	ENST00000511754	PLCD1	P51178	756 aa		4.17	□□□□□ -1.74
TNPO1-208	ENST00000511754	SOX8	P57073	446 aa		4.17	□□□□□ -1.74
TNPO1-208	ENST00000511754	LILRA4	P59901	499 aa		4.17	□□□□□ -1.74
TNPO1-208	ENST00000511754	KLF9	Q13886	244 aa	Predicted RBP	4.17	□□□□□ -1.74
TNPO1-208	ENST00000511754	PLS1	Q14651	629 aa		4.17	□□□□□ -1.74
TNPO1-208	ENST00000511754	KHDC1L	Q5JSQ8	128 aa		4.17	□□□□□ -1.74
TNPO1-208	ENST00000511754	CEP78	Q5JTW2	689 aa		4.17	□□□□□ -1.74
TNPO1-208	ENST00000511754	TMEM240	Q5SV17	173 aa		4.17	□□□□□ -1.74
TNPO1-208	ENST00000511754	RGS7BP	Q6MZT1	257 aa	Predicted RBP	4.17	□□□□□ -1.74
TNPO1-208	ENST00000511754	NAPRT	Q6XQN6	538 aa		4.17	□□□□□ -1.74
TNPO1-208	ENST00000511754	CATIP	Q7Z7H3	387 aa		4.17	□□□□□ -1.74
TNPO1-208	ENST00000511754	PNLDC1	Q8NA58	520 aa	Known RBP	4.17	□□□□□ -1.74
TNPO1-208	ENST00000511754	ABHD11	Q8NFV4	315 aa		4.17	□□□□□ -1.74
TNPO1-208	ENST00000511754	XAGE5	Q8WWM1	108 aa		4.17	□□□□□ -1.74
TNPO1-208	ENST00000511754	GLG1	Q92896	1179 aa		4.17	□□□□□ -1.74
TNPO1-208	ENST00000511754	ASB2	Q96Q27	587 aa		4.17	□□□□□ -1.74
TNPO1-208	ENST00000511754	SH2D3A	Q9BRG2	576 aa		4.17	□□□□□ -1.74
TNPO1-208	ENST00000511754	QTRT1	Q9BXR0	403 aa	Known RBP	4.17	□□□□□ -1.74
TNPO1-208	ENST00000511754	CNNM1	Q9NRU3	951 aa		4.17	□□□□□ -1.74
TNPO1-208	ENST00000511754	ADAMTS5	Q9UNA0	930 aa		4.17	□□□□□ -1.74
TNPO1-208	ENST00000511754	SSX2IP	Q9Y2D8	614 aa		4.17	□□□□□ -1.74
TNPO1-208	ENST00000511754	MYO1F	O00160	1098 aa		4.16	□□□□□ -1.74
TNPO1-208	ENST00000511754	DCLK1	O15075	740 aa		4.16	□□□□□ -1.74
TNPO1-208	ENST00000511754	MOSPD3	O75425	235 aa		4.16	□□□□□ -1.74
TNPO1-208	ENST00000511754	NHLRC4	P0CG21	123 aa	Predicted RBP	4.16	□□□□□ -1.74
TNPO1-208	ENST00000511754	HDC	P19113	662 aa		4.16	□□□□□ -1.74
TNPO1-208	ENST00000511754	TPTE	P56180	551 aa		4.16	□□□□□ -1.74
TNPO1-208	ENST00000511754	GPSM2	P81274	684 aa		4.16	□□□□□ -1.74
TNPO1-208	ENST00000511754	KRTAP5-1	Q6L8H4	278 aa		4.16	□□□□□ -1.74
TNPO1-208	ENST00000511754	MTHFD1L	Q6UB35	978 aa		4.16	□□□□□ -1.74
TNPO1-208	ENST00000511754	TRIM72	Q6ZMU5	477 aa		4.16	□□□□□ -1.74
TNPO1-208	ENST00000511754	CATSPERG	Q6ZRH7	1159 aa		4.16	□□□□□ -1.74
TNPO1-208	ENST00000511754	ZBTB46	Q86UZ6	589 aa		4.16	□□□□□ -1.74
TNPO1-208	ENST00000511754	CNGA4	Q8IV77	575 aa		4.16	□□□□□ -1.74
TNPO1-208	ENST00000511754	ZCRB1	Q8TBF4	217 aa	Known RBP	4.16	□□□□□ -1.74
TNPO1-208	ENST00000511754	ATG4A	Q8WYN0	398 aa		4.16	□□□□□ -1.74
TNPO1-208	ENST00000511754	WASF1	Q92558	559 aa		4.16	□□□□□ -1.74
TNPO1-208	ENST00000511754	ZBTB9	Q96C00	473 aa		4.16	□□□□□ -1.74
TNPO1-208	ENST00000511754	R3HDM4	Q96D70	268 aa		4.16	□□□□□ -1.74
TNPO1-208	ENST00000511754	DAZAP1	Q96EP5	407 aa	Known RBP	4.16	□□□□□ -1.74
TNPO1-208	ENST00000511754	MVB12A	Q96EY5	273 aa		4.16	□□□□□ -1.74
TNPO1-208	ENST00000511754	MAP3K14	Q99558	947 aa		4.16	□□□□□ -1.74
TNPO1-208	ENST00000511754	FSD1L	Q9BXM9	530 aa		4.16	□□□□□ -1.74
TNPO1-208	ENST00000511754	NDRG4	Q9ULP0	352 aa	Known RBP	4.16	□□□□□ -1.74
TNPO1-208	ENST00000511754	PCDHA6	Q9UN73	950 aa		4.16	□□□□□ -1.74
TNPO1-208	ENST00000511754	CADPS	Q9ULU8	1353 aa		4.15	□□□□□ -1.74
TNPO1-208	ENST00000511754	KCNU1	A8MYU2	1149 aa		4.15	□□□□□ -1.75
TNPO1-208	ENST00000511754	CYP2C9	P11712	490 aa		4.15	□□□□□ -1.75
TNPO1-208	ENST00000511754	XRCC6	P12956	609 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
TNPO1-208	ENST00000511754	LRPAP1	P30533	357 aa		4.15	□□□□□ -1.75
TNPO1-208	ENST00000511754	VIPR2	P41587	438 aa		4.15	□□□□□ -1.75
TNPO1-208	ENST00000511754	CCT4	P50991	539 aa	Known RBP	4.15	□□□□□ -1.75
TNPO1-208	ENST00000511754	CYP4F2	P78329	520 aa		4.15	□□□□□ -1.75
TNPO1-208	ENST00000511754	NKX6-1	P78426	367 aa	Predicted RBP	4.15	□□□□□ -1.75
TNPO1-208	ENST00000511754	SP2	Q02086	613 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 60 ms