RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 MYLPFQ96A32 169 aa12.54□□□□□ -0.4
HMGXB3-203ENST00000510472 MCRS1Q96EZ8 462 aa12.54□□□□□ -0.4
HMGXB3-203ENST00000510472 MYRFLQ96LU7 910 aa12.54□□□□□ -0.4
HMGXB3-203ENST00000510472 CEP295NLQ96MC4 621 aa12.54□□□□□ -0.4
HMGXB3-203ENST00000510472 ZSWIM3Q96MP5 696 aa12.54□□□□□ -0.4
HMGXB3-203ENST00000510472 LRFN3Q9BTN0 628 aa12.54□□□□□ -0.4
HMGXB3-203ENST00000510472 B3GNT5Q9BYG0 378 aa12.54□□□□□ -0.4
HMGXB3-203ENST00000510472 NUP62CLQ9H1M0 184 aa12.54□□□□□ -0.4
HMGXB3-203ENST00000510472 CYP3A43Q9HB55 503 aa12.54□□□□□ -0.4
HMGXB3-203ENST00000510472 TRPV4Q9HBA0 871 aa12.54□□□□□ -0.4
HMGXB3-203ENST00000510472 ASAH2Q9NR71 780 aa12.54□□□□□ -0.4
HMGXB3-203ENST00000510472 RAB20Q9NX57 234 aa12.54□□□□□ -0.4
HMGXB3-203ENST00000510472 CTNND2Q9UQB3 1225 aa12.54□□□□□ -0.4
HMGXB3-203ENST00000510472 NUMBLQ9Y6R0 609 aa12.54□□□□□ -0.4
HMGXB3-203ENST00000510472 TECTAO75443 2155 aa12.54□□□□□ -0.4
HMGXB3-203ENST00000510472 A8MXQ7 604 aa12.53□□□□□ -0.4
HMGXB3-203ENST00000510472 PRR33A8MZF0 331 aa12.53□□□□□ -0.4
HMGXB3-203ENST00000510472 NOL4O94818 638 aa12.53□□□□□ -0.4
HMGXB3-203ENST00000510472 GNA14O95837 355 aa12.53□□□□□ -0.4
HMGXB3-203ENST00000510472 F11P03951 625 aa12.53□□□□□ -0.4
HMGXB3-203ENST00000510472 MYL4P12829 197 aa12.53□□□□□ -0.4
HMGXB3-203ENST00000510472 P4HA1P13674 534 aa12.53□□□□□ -0.4
HMGXB3-203ENST00000510472 GJA1P17302 382 aa12.53□□□□□ -0.4
HMGXB3-203ENST00000510472 FCARP24071 287 aa12.53□□□□□ -0.4
HMGXB3-203ENST00000510472 RPL10AP62906 217 aaKnown RBP12.53□□□□□ -0.4
HMGXB3-203ENST00000510472 NOP14P78316 857 aaKnown RBP12.53□□□□□ -0.4
HMGXB3-203ENST00000510472 FAM78AQ5JUQ0 283 aa12.53□□□□□ -0.4
HMGXB3-203ENST00000510472 SDHAF4Q5VUM1 108 aa12.53□□□□□ -0.4
HMGXB3-203ENST00000510472 C4orf50Q6ZRC1 276 aa12.53□□□□□ -0.4
HMGXB3-203ENST00000510472 UNC93AQ86WB7 457 aa12.53□□□□□ -0.4
HMGXB3-203ENST00000510472 IRF2BP1Q8IU81 584 aa12.53□□□□□ -0.4
HMGXB3-203ENST00000510472 SPATA2LQ8IUW3 424 aaPredicted RBP12.53□□□□□ -0.4
HMGXB3-203ENST00000510472 TRIM59Q8IWR1 403 aa12.53□□□□□ -0.4
HMGXB3-203ENST00000510472 B3GALNT2Q8NCR0 500 aa12.53□□□□□ -0.4
HMGXB3-203ENST00000510472 GPR152Q8TDT2 470 aa12.53□□□□□ -0.4
HMGXB3-203ENST00000510472 SPATA17Q96L03 361 aa12.53□□□□□ -0.4
HMGXB3-203ENST00000510472 ASB16Q96NS5 453 aa12.53□□□□□ -0.4
HMGXB3-203ENST00000510472 SRRTQ9BXP5 876 aaKnown RBP12.53□□□□□ -0.4
HMGXB3-203ENST00000510472 GPR88Q9GZN0 384 aa12.53□□□□□ -0.4
HMGXB3-203ENST00000510472 NIF3L1Q9GZT8 377 aa12.53□□□□□ -0.4
HMGXB3-203ENST00000510472 TMEM30AQ9NV96 361 aa12.53□□□□□ -0.4
HMGXB3-203ENST00000510472 MAGEC2Q9UBF1 373 aaPredicted RBP12.53□□□□□ -0.4
HMGXB3-203ENST00000510472 DUSP12Q9UNI6 340 aa12.53□□□□□ -0.4
HMGXB3-203ENST00000510472 DOCK8Q8NF50 2099 aa12.53□□□□□ -0.4
HMGXB3-203ENST00000510472 A0A1W2PRU2 124 aa12.52□□□□□ -0.41
HMGXB3-203ENST00000510472 FAM86C2PA6NEL3 165 aa12.52□□□□□ -0.41
HMGXB3-203ENST00000510472 TMEM221A6NGB7 291 aa12.52□□□□□ -0.41
HMGXB3-203ENST00000510472 M0R296 226 aa12.52□□□□□ -0.41
HMGXB3-203ENST00000510472 ECI2O75521 394 aa12.52□□□□□ -0.41
HMGXB3-203ENST00000510472 FGF19O95750 216 aa12.52□□□□□ -0.41
HMGXB3-203ENST00000510472 BDNFP23560 247 aa12.52□□□□□ -0.41
HMGXB3-203ENST00000510472 WEE1P30291 646 aa12.52□□□□□ -0.41
HMGXB3-203ENST00000510472 FMO5P49326 533 aa12.52□□□□□ -0.41
HMGXB3-203ENST00000510472 NDST1P52848 882 aa12.52□□□□□ -0.41
HMGXB3-203ENST00000510472 CACNA2D1P54289 1103 aa12.52□□□□□ -0.41
HMGXB3-203ENST00000510472 VEPH1Q14D04 833 aa12.52□□□□□ -0.41
HMGXB3-203ENST00000510472 TEAD2Q15562 447 aa12.52□□□□□ -0.41
HMGXB3-203ENST00000510472 MDH1BQ5I0G3 518 aa12.52□□□□□ -0.41
HMGXB3-203ENST00000510472 TANGO2Q6ICL3 276 aa12.52□□□□□ -0.41
HMGXB3-203ENST00000510472 SCARA5Q6ZMJ2 495 aa12.52□□□□□ -0.41
HMGXB3-203ENST00000510472 MTSS1LQ765P7 747 aa12.52□□□□□ -0.41
HMGXB3-203ENST00000510472 ST13P5Q8NFI4 369 aaPredicted RBP12.52□□□□□ -0.41
HMGXB3-203ENST00000510472 LMO3Q8TAP4 145 aa12.52□□□□□ -0.41
HMGXB3-203ENST00000510472 TATDN2Q93075 761 aa12.52□□□□□ -0.41
HMGXB3-203ENST00000510472 TRMT2BQ96GJ1 504 aaKnown RBP12.52□□□□□ -0.41
HMGXB3-203ENST00000510472 TWNKQ96RR1 684 aa12.52□□□□□ -0.41
HMGXB3-203ENST00000510472 PLA2G2FQ9BZM2 168 aa12.52□□□□□ -0.41
HMGXB3-203ENST00000510472 MMRN2Q9H8L6 949 aa12.52□□□□□ -0.41
HMGXB3-203ENST00000510472 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.52□□□□□ -0.41
HMGXB3-203ENST00000510472 SLC2A4RGQ9NR83 387 aa12.52□□□□□ -0.41
HMGXB3-203ENST00000510472 HMGXB4Q9UGU5 601 aa12.52□□□□□ -0.41
HMGXB3-203ENST00000510472 MYO10Q9HD67 2058 aa12.52□□□□□ -0.41
HMGXB3-203ENST00000510472 SLC38A8A6NNN8 435 aa12.51□□□□□ -0.41
HMGXB3-203ENST00000510472 SOBPA7XYQ1 873 aa12.51□□□□□ -0.41
HMGXB3-203ENST00000510472 P4HA2O15460 535 aa12.51□□□□□ -0.41
HMGXB3-203ENST00000510472 NARSO43776 548 aaKnown RBP12.51□□□□□ -0.41
HMGXB3-203ENST00000510472 CILPO75339 1184 aa12.51□□□□□ -0.41
HMGXB3-203ENST00000510472 CSH1P0DML2 217 aa12.51□□□□□ -0.41
HMGXB3-203ENST00000510472 CSH2P0DML3 217 aa12.51□□□□□ -0.41
HMGXB3-203ENST00000510472 SRFP11831 508 aa12.51□□□□□ -0.41
HMGXB3-203ENST00000510472 GABRR2P28476 465 aa12.51□□□□□ -0.41
HMGXB3-203ENST00000510472 ERCC5P28715 1186 aaPredicted RBP12.51□□□□□ -0.41
HMGXB3-203ENST00000510472 NLRP12P59046 1061 aa12.51□□□□□ -0.41
HMGXB3-203ENST00000510472 CYP27A1Q02318 531 aa12.51□□□□□ -0.41
HMGXB3-203ENST00000510472 DPCR1Q3MIW9 517 aa12.51□□□□□ -0.41
HMGXB3-203ENST00000510472 DCAF17Q5H9S7 520 aaPredicted RBP12.51□□□□□ -0.41
HMGXB3-203ENST00000510472 CT47A1Q5JQC4 288 aaPredicted RBP12.51□□□□□ -0.41
HMGXB3-203ENST00000510472 STXBP5Q5T5C0 1151 aa12.51□□□□□ -0.41
HMGXB3-203ENST00000510472 TCERG1LQ5VWI1 586 aa12.51□□□□□ -0.41
HMGXB3-203ENST00000510472 HFE2Q6ZVN8 426 aa12.51□□□□□ -0.41
HMGXB3-203ENST00000510472 ACOT1Q86TX2 421 aa12.51□□□□□ -0.41
HMGXB3-203ENST00000510472 FUKQ8N0W3 1084 aa12.51□□□□□ -0.41
HMGXB3-203ENST00000510472 SMARCD2Q92925 531 aa12.51□□□□□ -0.41
HMGXB3-203ENST00000510472 TNIP3Q96KP6 325 aa12.51□□□□□ -0.41
HMGXB3-203ENST00000510472 C8orf48Q96LL4 319 aa12.51□□□□□ -0.41
HMGXB3-203ENST00000510472 IMPG2Q9BZV3 1241 aa12.51□□□□□ -0.41
HMGXB3-203ENST00000510472 ZNF518BQ9C0D4 1074 aa12.51□□□□□ -0.41
HMGXB3-203ENST00000510472 FAM124BQ9H5Z6 455 aaPredicted RBP12.51□□□□□ -0.41
HMGXB3-203ENST00000510472 WNT16Q9UBV4 365 aa12.51□□□□□ -0.41
HMGXB3-203ENST00000510472 GOLGA6L22H0YM25 854 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms