RNA–Protein interactions for RNA: ENST00000509774.5

PTPN20-222, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-222ENST00000509774 C1RP00736 705 aa11.06□□□□□ -0.64
PTPN20-222ENST00000509774 CTSAP10619 480 aa11.06□□□□□ -0.64
PTPN20-222ENST00000509774 LAMP2P13473 410 aa11.06□□□□□ -0.64
PTPN20-222ENST00000509774 CD72P21854 359 aa11.06□□□□□ -0.64
PTPN20-222ENST00000509774 CLCN4P51793 760 aa11.06□□□□□ -0.64
PTPN20-222ENST00000509774 PAK1Q13153 545 aa11.06□□□□□ -0.64
PTPN20-222ENST00000509774 MLF2Q15773 248 aaPredicted RBP11.06□□□□□ -0.64
PTPN20-222ENST00000509774 CCDC6Q16204 474 aa11.06□□□□□ -0.64
PTPN20-222ENST00000509774 ANKRD40Q6AI12 368 aa11.06□□□□□ -0.64
PTPN20-222ENST00000509774 ISM2Q6H9L7 571 aa11.06□□□□□ -0.64
PTPN20-222ENST00000509774 JADE1Q6IE81 842 aa11.06□□□□□ -0.64
PTPN20-222ENST00000509774 PDXDC1Q6P996 788 aa11.06□□□□□ -0.64
PTPN20-222ENST00000509774 PRR23BQ6ZRT6 265 aa11.06□□□□□ -0.64
PTPN20-222ENST00000509774 PPFIBP1Q86W92 1011 aa11.06□□□□□ -0.64
PTPN20-222ENST00000509774 CBWD2Q8IUF1 395 aa11.06□□□□□ -0.64
PTPN20-222ENST00000509774 SMYD4Q8IYR2 804 aaPredicted RBP11.06□□□□□ -0.64
PTPN20-222ENST00000509774 PARD3BQ8TEW8 1205 aa11.06□□□□□ -0.64
PTPN20-222ENST00000509774 ZCCHC14Q8WYQ9 949 aaKnown RBP11.06□□□□□ -0.64
PTPN20-222ENST00000509774 ANKRD36BP1Q96IX9 119 aa11.06□□□□□ -0.64
PTPN20-222ENST00000509774 METTL14Q9HCE5 456 aaKnown RBP11.06□□□□□ -0.64
PTPN20-222ENST00000509774 RXFP3Q9NSD7 469 aa11.06□□□□□ -0.64
PTPN20-222ENST00000509774 INTS13Q9NVM9 706 aa11.06□□□□□ -0.64
PTPN20-222ENST00000509774 RWDD2AQ9UIY3 292 aa11.06□□□□□ -0.64
PTPN20-222ENST00000509774 ITGA11Q9UKX5 1188 aa11.06□□□□□ -0.64
PTPN20-222ENST00000509774 NUMBLQ9Y6R0 609 aa11.06□□□□□ -0.64
PTPN20-222ENST00000509774 PODXLO00592 558 aa11.05□□□□□ -0.64
PTPN20-222ENST00000509774 PIRO00625 290 aa11.05□□□□□ -0.64
PTPN20-222ENST00000509774 SLC16A3O15427 465 aaKnown RBP11.05□□□□□ -0.64
PTPN20-222ENST00000509774 STX10O60499 249 aa11.05□□□□□ -0.64
PTPN20-222ENST00000509774 B3GAT3O94766 335 aa11.05□□□□□ -0.64
PTPN20-222ENST00000509774 TNNC2P02585 160 aa11.05□□□□□ -0.64
PTPN20-222ENST00000509774 SOD2P04179 222 aa11.05□□□□□ -0.64
PTPN20-222ENST00000509774 KRT13P13646 458 aa11.05□□□□□ -0.64
PTPN20-222ENST00000509774 GTF2H1P32780 548 aa11.05□□□□□ -0.64
PTPN20-222ENST00000509774 PNPLA4P41247 253 aa11.05□□□□□ -0.64
PTPN20-222ENST00000509774 CLCNKBP51801 687 aa11.05□□□□□ -0.64
PTPN20-222ENST00000509774 PRKCQQ04759 706 aa11.05□□□□□ -0.64
PTPN20-222ENST00000509774 USP41Q3LFD5 358 aa11.05□□□□□ -0.64
PTPN20-222ENST00000509774 MSS51Q4VC12 460 aa11.05□□□□□ -0.64
PTPN20-222ENST00000509774 GLRA4Q5JXX5 417 aa11.05□□□□□ -0.64
PTPN20-222ENST00000509774 TTI2Q6NXR4 508 aa11.05□□□□□ -0.64
PTPN20-222ENST00000509774 SASS6Q6UVJ0 657 aa11.05□□□□□ -0.64
PTPN20-222ENST00000509774 RNF168Q8IYW5 571 aaPredicted RBP11.05□□□□□ -0.64
PTPN20-222ENST00000509774 ZSWIM2Q8NEG5 633 aa11.05□□□□□ -0.64
PTPN20-222ENST00000509774 CMASQ8NFW8 434 aaPredicted RBP11.05□□□□□ -0.64
PTPN20-222ENST00000509774 NELFBQ8WX92 580 aa11.05□□□□□ -0.64
PTPN20-222ENST00000509774 CGRRF1Q99675 332 aa11.05□□□□□ -0.64
PTPN20-222ENST00000509774 OXCT2Q9BYC2 517 aaPredicted RBP11.05□□□□□ -0.64
PTPN20-222ENST00000509774 CXCL16Q9H2A7 254 aa11.05□□□□□ -0.64
PTPN20-222ENST00000509774 PDE11AQ9HCR9 933 aa11.05□□□□□ -0.64
PTPN20-222ENST00000509774 CHST7Q9NS84 486 aa11.05□□□□□ -0.64
PTPN20-222ENST00000509774 DPP3Q9NY33 737 aa11.05□□□□□ -0.64
PTPN20-222ENST00000509774 R3HCC1Q9Y3T6 440 aaKnown RBP11.05□□□□□ -0.64
PTPN20-222ENST00000509774 SF3B1O75533 1304 aaKnown RBP eCLIP11.05□□□□□ -0.64
PTPN20-222ENST00000509774 LAMA5O15230 3695 aa11.05□□□□□ -0.64
PTPN20-222ENST00000509774 CASTOR2A6NHX0 329 aa11.04□□□□□ -0.64
PTPN20-222ENST00000509774 SYN3O14994 580 aa11.04□□□□□ -0.64
PTPN20-222ENST00000509774 B4GALT3O60512 393 aa11.04□□□□□ -0.64
PTPN20-222ENST00000509774 FOXD2O60548 495 aaPredicted RBP11.04□□□□□ -0.64
PTPN20-222ENST00000509774 AKAP3O75969 853 aa11.04□□□□□ -0.64
PTPN20-222ENST00000509774 TOP3BO95985 862 aaKnown RBP11.04□□□□□ -0.64
PTPN20-222ENST00000509774 NFICP08651 508 aa11.04□□□□□ -0.64
PTPN20-222ENST00000509774 FAM163BP0C2L3 166 aa11.04□□□□□ -0.64
PTPN20-222ENST00000509774 TMEM191BP0C7N4 346 aa11.04□□□□□ -0.64
PTPN20-222ENST00000509774 EPB41P11171 864 aaKnown RBP11.04□□□□□ -0.64
PTPN20-222ENST00000509774 TNNI1P19237 187 aa11.04□□□□□ -0.64
PTPN20-222ENST00000509774 TARSP26639 723 aaKnown RBP11.04□□□□□ -0.64
PTPN20-222ENST00000509774 RPS9P46781 194 aaKnown RBP11.04□□□□□ -0.64
PTPN20-222ENST00000509774 RBP5P82980 135 aa11.04□□□□□ -0.64
PTPN20-222ENST00000509774 TFAMQ00059 246 aaKnown RBP11.04□□□□□ -0.64
PTPN20-222ENST00000509774 CREMQ03060 361 aa11.04□□□□□ -0.64
PTPN20-222ENST00000509774 SOX4Q06945 474 aaPredicted RBP11.04□□□□□ -0.64
PTPN20-222ENST00000509774 MTAPQ13126 283 aa11.04□□□□□ -0.64
PTPN20-222ENST00000509774 FZD5Q13467 585 aa11.04□□□□□ -0.64
PTPN20-222ENST00000509774 SLC44A4Q53GD3 710 aa11.04□□□□□ -0.64
PTPN20-222ENST00000509774 C9orf57Q5W0N0 161 aa11.04□□□□□ -0.64
PTPN20-222ENST00000509774 CEP135Q66GS9 1140 aa11.04□□□□□ -0.64
PTPN20-222ENST00000509774 PSAPL1Q6NUJ1 521 aa11.04□□□□□ -0.64
PTPN20-222ENST00000509774 FUT10Q6P4F1 479 aa11.04□□□□□ -0.64
PTPN20-222ENST00000509774 FAM186BQ8IYM0 893 aa11.04□□□□□ -0.64
PTPN20-222ENST00000509774 LRRC52Q8N7C0 313 aa11.04□□□□□ -0.64
PTPN20-222ENST00000509774 NOC3LQ8WTT2 800 aaKnown RBP11.04□□□□□ -0.64
PTPN20-222ENST00000509774 BCL7CQ8WUZ0 217 aaPredicted RBP11.04□□□□□ -0.64
PTPN20-222ENST00000509774 C18orf25Q96B23 403 aaPredicted RBP11.04□□□□□ -0.64
PTPN20-222ENST00000509774 LSM14BQ9BX40 385 aaKnown RBP11.04□□□□□ -0.64
PTPN20-222ENST00000509774 VN1R3Q9BXE9 311 aa11.04□□□□□ -0.64
PTPN20-222ENST00000509774 RHOBTB2Q9BYZ6 727 aa11.04□□□□□ -0.64
PTPN20-222ENST00000509774 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.04□□□□□ -0.64
PTPN20-222ENST00000509774 ANO10Q9NW15 660 aa11.04□□□□□ -0.64
PTPN20-222ENST00000509774 MARCH5Q9NX47 278 aa11.04□□□□□ -0.64
PTPN20-222ENST00000509774 TOR4AQ9NXH8 423 aa11.04□□□□□ -0.64
PTPN20-222ENST00000509774 PRG3Q9Y2Y8 225 aaPredicted RBP11.04□□□□□ -0.64
PTPN20-222ENST00000509774 NUB1Q9Y5A7 615 aa11.04□□□□□ -0.64
PTPN20-222ENST00000509774 TENM4Q6N022 2769 aa11.03□□□□□ -0.64
PTPN20-222ENST00000509774 CCDC195A0A1B0GUA6 201 aa11.03□□□□□ -0.64
PTPN20-222ENST00000509774 CNPP09543 421 aaKnown RBP11.03□□□□□ -0.64
PTPN20-222ENST00000509774 DLATP10515 647 aaKnown RBP11.03□□□□□ -0.64
PTPN20-222ENST00000509774 ATICP31939 592 aa11.03□□□□□ -0.64
PTPN20-222ENST00000509774 AARSP49588 968 aaKnown RBP eCLIP11.03□□□□□ -0.64
PTPN20-222ENST00000509774 CASP4P49662 377 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms