RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 HS2ST1Q7LGA3 356 aa13.54□□□□□ -0.24
KDM3B-206ENST00000509468 TMEM150AQ86TG1 271 aa13.54□□□□□ -0.24
KDM3B-206ENST00000509468 CBWD2Q8IUF1 395 aa13.54□□□□□ -0.24
KDM3B-206ENST00000509468 DCLK2Q8N568 766 aa13.54□□□□□ -0.24
KDM3B-206ENST00000509468 RDH13Q8NBN7 331 aa13.54□□□□□ -0.24
KDM3B-206ENST00000509468 TTC8Q8TAM2 541 aa13.54□□□□□ -0.24
KDM3B-206ENST00000509468 EXOC4Q96A65 974 aa13.54□□□□□ -0.24
KDM3B-206ENST00000509468 CEP295NLQ96MC4 621 aa13.54□□□□□ -0.24
KDM3B-206ENST00000509468 PKMYT1Q99640 499 aa13.54□□□□□ -0.24
KDM3B-206ENST00000509468 EHD2Q9NZN4 543 aa13.54□□□□□ -0.24
KDM3B-206ENST00000509468 CDH9Q9ULB4 789 aa13.54□□□□□ -0.24
KDM3B-206ENST00000509468 RAB23Q9ULC3 237 aa13.54□□□□□ -0.24
KDM3B-206ENST00000509468 UBE4BO95155 1302 aa13.54□□□□□ -0.24
KDM3B-206ENST00000509468 ZNF292O60281 2723 aa13.54□□□□□ -0.24
KDM3B-206ENST00000509468 WDR87Q6ZQQ6 2873 aa13.54□□□□□ -0.24
KDM3B-206ENST00000509468 OBSL1O75147 1896 aa13.53□□□□□ -0.24
KDM3B-206ENST00000509468 TGFB1I1O43294 461 aa13.53□□□□□ -0.24
KDM3B-206ENST00000509468 PRAMEF12O95522 483 aa13.53□□□□□ -0.24
KDM3B-206ENST00000509468 F13A1P00488 732 aa13.53□□□□□ -0.24
KDM3B-206ENST00000509468 USP17L7P0C7H9 530 aa13.53□□□□□ -0.24
KDM3B-206ENST00000509468 TDGF1P13385 188 aa13.53□□□□□ -0.24
KDM3B-206ENST00000509468 CNR2P34972 360 aa13.53□□□□□ -0.24
KDM3B-206ENST00000509468 MAGEA11P43364 429 aa13.53□□□□□ -0.24
KDM3B-206ENST00000509468 SOX9P48436 509 aa13.53□□□□□ -0.24
KDM3B-206ENST00000509468 RUNX3Q13761 415 aa13.53□□□□□ -0.24
KDM3B-206ENST00000509468 ZNF268Q14587 947 aaPredicted RBP13.53□□□□□ -0.24
KDM3B-206ENST00000509468 FOXD4L5Q5VV16 416 aaPredicted RBP13.53□□□□□ -0.24
KDM3B-206ENST00000509468 TXNDC8Q6A555 127 aa13.53□□□□□ -0.24
KDM3B-206ENST00000509468 SCARA3Q6AZY7 606 aa13.53□□□□□ -0.24
KDM3B-206ENST00000509468 VSTM1Q6UX27 236 aa13.53□□□□□ -0.24
KDM3B-206ENST00000509468 TRAPPC11Q7Z392 1133 aa13.53□□□□□ -0.24
KDM3B-206ENST00000509468 LIMS2Q7Z4I7 341 aa13.53□□□□□ -0.24
KDM3B-206ENST00000509468 OSTM1Q86WC4 334 aa13.53□□□□□ -0.24
KDM3B-206ENST00000509468 SCN4BQ8IWT1 228 aa13.53□□□□□ -0.24
KDM3B-206ENST00000509468 XXYLT1Q8NBI6 393 aa13.53□□□□□ -0.24
KDM3B-206ENST00000509468 GLIS3Q8NEA6 775 aa13.53□□□□□ -0.24
KDM3B-206ENST00000509468 OR5B17Q8NGF7 314 aa13.53□□□□□ -0.24
KDM3B-206ENST00000509468 FOXD4L4Q8WXT5 416 aaPredicted RBP13.53□□□□□ -0.24
KDM3B-206ENST00000509468 USP13Q92995 863 aaPredicted RBP13.53□□□□□ -0.24
KDM3B-206ENST00000509468 MMS19Q96T76 1030 aa13.53□□□□□ -0.24
KDM3B-206ENST00000509468 FAM83CQ9BQN1 747 aa13.53□□□□□ -0.24
KDM3B-206ENST00000509468 SMG9Q9H0W8 520 aaKnown RBP13.53□□□□□ -0.24
KDM3B-206ENST00000509468 AGPAT3Q9NRZ7 376 aa13.53□□□□□ -0.24
KDM3B-206ENST00000509468 F5P12259 2224 aa13.53□□□□□ -0.24
KDM3B-206ENST00000509468 TRAV19A0A0A6YYK7 116 aa13.52□□□□□ -0.25
KDM3B-206ENST00000509468 ATG13O75143 517 aa13.52□□□□□ -0.25
KDM3B-206ENST00000509468 PAPSS2O95340 614 aaPredicted RBP13.52□□□□□ -0.25
KDM3B-206ENST00000509468 DLATP10515 647 aaKnown RBP13.52□□□□□ -0.25
KDM3B-206ENST00000509468 WARSP23381 471 aaKnown RBP13.52□□□□□ -0.25
KDM3B-206ENST00000509468 LMO2P25791 158 aa13.52□□□□□ -0.25
KDM3B-206ENST00000509468 GNL1P36915 607 aaPredicted RBP13.52□□□□□ -0.25
KDM3B-206ENST00000509468 GRIK1P39086 918 aa13.52□□□□□ -0.25
KDM3B-206ENST00000509468 GPR15P49685 360 aa13.52□□□□□ -0.25
KDM3B-206ENST00000509468 PDE6CP51160 858 aa13.52□□□□□ -0.25
KDM3B-206ENST00000509468 SATB1Q01826 763 aa13.52□□□□□ -0.25
KDM3B-206ENST00000509468 TNK2Q07912 1038 aa13.52□□□□□ -0.25
KDM3B-206ENST00000509468 EHHADHQ08426 723 aa13.52□□□□□ -0.25
KDM3B-206ENST00000509468 GRSF1Q12849 480 aaKnown RBP eCLIP13.52□□□□□ -0.25
KDM3B-206ENST00000509468 PUM1Q14671 1186 aaKnown RBP eCLIP13.52□□□□□ -0.25
KDM3B-206ENST00000509468 PSMD6Q15008 389 aa13.52□□□□□ -0.25
KDM3B-206ENST00000509468 PON2Q15165 354 aa13.52□□□□□ -0.25
KDM3B-206ENST00000509468 PDGFRLQ15198 375 aa13.52□□□□□ -0.25
KDM3B-206ENST00000509468 KNOP1Q1ED39 458 aaKnown RBP13.52□□□□□ -0.25
KDM3B-206ENST00000509468 FOXD4L6Q3SYB3 417 aaPredicted RBP13.52□□□□□ -0.25
KDM3B-206ENST00000509468 SDHAF4Q5VUM1 108 aa13.52□□□□□ -0.25
KDM3B-206ENST00000509468 RESP18Q5W5W9 173 aa13.52□□□□□ -0.25
KDM3B-206ENST00000509468 LMBRD2Q68DH5 695 aaPredicted RBP13.52□□□□□ -0.25
KDM3B-206ENST00000509468 FOXD4L3Q6VB84 417 aaPredicted RBP13.52□□□□□ -0.25
KDM3B-206ENST00000509468 CEP57L1Q8IYX8 460 aa13.52□□□□□ -0.25
KDM3B-206ENST00000509468 GOLGA5Q8TBA6 731 aa13.52□□□□□ -0.25
KDM3B-206ENST00000509468 MYCBPAPQ8TBZ2 947 aa13.52□□□□□ -0.25
KDM3B-206ENST00000509468 SCFD1Q8WVM8 642 aa13.52□□□□□ -0.25
KDM3B-206ENST00000509468 CCDC127Q96BQ5 260 aa13.52□□□□□ -0.25
KDM3B-206ENST00000509468 SPATA17Q96L03 361 aa13.52□□□□□ -0.25
KDM3B-206ENST00000509468 SNX25Q9H3E2 840 aa13.52□□□□□ -0.25
KDM3B-206ENST00000509468 RCOR1Q9UKL0 485 aa13.52□□□□□ -0.25
KDM3B-206ENST00000509468 PCDHA7Q9UN72 937 aa13.52□□□□□ -0.25
KDM3B-206ENST00000509468 SMG5Q9UPR3 1016 aaKnown RBP13.52□□□□□ -0.25
KDM3B-206ENST00000509468 SPTBN4Q9H254 2564 aa13.52□□□□□ -0.25
KDM3B-206ENST00000509468 GREB1Q4ZG55 1949 aa13.51□□□□□ -0.25
KDM3B-206ENST00000509468 PTPRJQ12913 1337 aa13.51□□□□□ -0.25
KDM3B-206ENST00000509468 CLIC2O15247 247 aa13.51□□□□□ -0.25
KDM3B-206ENST00000509468 ATP2C2O75185 946 aa13.51□□□□□ -0.25
KDM3B-206ENST00000509468 TACC1O75410 805 aa13.51□□□□□ -0.25
KDM3B-206ENST00000509468 CST3P01034 146 aaPredicted RBP13.51□□□□□ -0.25
KDM3B-206ENST00000509468 PDGFRBP09619 1106 aa13.51□□□□□ -0.25
KDM3B-206ENST00000509468 PFKLP17858 780 aa13.51□□□□□ -0.25
KDM3B-206ENST00000509468 HOXA6P31267 233 aa13.51□□□□□ -0.25
KDM3B-206ENST00000509468 AFMP43652 599 aa13.51□□□□□ -0.25
KDM3B-206ENST00000509468 FAM160A1Q05DH4 1040 aa13.51□□□□□ -0.25
KDM3B-206ENST00000509468 CYP24A1Q07973 514 aa13.51□□□□□ -0.25
KDM3B-206ENST00000509468 PSMD2Q13200 908 aa13.51□□□□□ -0.25
KDM3B-206ENST00000509468 TRPC3Q13507 836 aa13.51□□□□□ -0.25
KDM3B-206ENST00000509468 CCINQ13939 588 aa13.51□□□□□ -0.25
KDM3B-206ENST00000509468 GAS6Q14393 721 aa13.51□□□□□ -0.25
KDM3B-206ENST00000509468 BMT2Q1RMZ1 405 aa13.51□□□□□ -0.25
KDM3B-206ENST00000509468 TXNDC11Q6PKC3 985 aa13.51□□□□□ -0.25
KDM3B-206ENST00000509468 LONP2Q86WA8 852 aa13.51□□□□□ -0.25
KDM3B-206ENST00000509468 C12orf56Q8IXR9 622 aa13.51□□□□□ -0.25
KDM3B-206ENST00000509468 FAM84AQ96KN4 292 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms