RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 PRSS36Q5K4E3 855 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 TANGO2Q6ICL3 276 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 INTS8Q75QN2 995 aaKnown RBP9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 DNAJB7Q7Z6W7 309 aaPredicted RBP9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 LRRTM3Q86VH5 581 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 YAF2Q8IY57 180 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 ADGRF2Q8IZF7 708 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 TTC9BQ8N6N2 239 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 TOP6BLQ8N6T0 577 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 TMEM105Q8N8V8 129 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 PRSS33Q8NF86 280 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 ENOX1Q8TC92 643 aaKnown RBP9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 SPPL2BQ8TCT7 592 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 GIPC2Q8TF65 315 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 ATOH1Q92858 354 aaPredicted RBP9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 SMARCD2Q92925 531 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 KAT5Q92993 513 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 PKMYT1Q99640 499 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 TSG101Q99816 390 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 ARID3AQ99856 593 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 ACBD6Q9BR61 282 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 MRPL45Q9BRJ2 306 aaKnown RBP9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 GPR88Q9GZN0 384 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 IRF2BPLQ9H1B7 796 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 ATXN3LQ9H3M9 355 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 ARHGEF3Q9NR81 526 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 SLC2A4RGQ9NR83 387 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 TMLHEQ9NVH6 421 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 FANCLQ9NW38 375 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 HSFX1Q9UBD0 423 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 HMGXB4Q9UGU5 601 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 FRMD4BQ9Y2L6 1034 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 NFE2L3Q9Y4A8 694 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 PATJQ8NI35 1801 aa9.35□□□□□ -0.91
PDLIM5-213ENST00000509357 BICDL2A1A5D9 508 aa9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 KRBA1A5PL33 1030 aa9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 H0Y858 1186 aa9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 DPYSL4O14531 572 aa9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 IKBKBO14920 756 aa9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 ASS1P00966 412 aaKnown RBP9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 PDGFRBP09619 1106 aa9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 HAPLN1P10915 354 aaPredicted RBP9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 AOC1P19801 751 aa9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 LMO2P25791 158 aa9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 RPL13P26373 211 aaKnown RBP9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 GABRR2P28476 465 aa9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 PPP1R2P41236 205 aa9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 ASPAP45381 313 aa9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 FMO5P49326 533 aa9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 NUBP1P53384 320 aa9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 NHLH1Q02575 133 aa9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 ENPEPQ07075 957 aa9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 STIM1Q13586 685 aa9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 NCOA4Q13772 614 aa9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 GRM2Q14416 872 aa9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 SLC44A4Q53GD3 710 aa9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 POTEHQ6S545 545 aa9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 FRMD5Q7Z6J6 570 aa9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 SPATA2LQ8IUW3 424 aaPredicted RBP9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 AOPEPQ8N6M6 819 aa9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 UBR7Q8N806 425 aa9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 SHKBP1Q8TBC3 707 aa9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 ZSCAN18Q8TBC5 510 aaPredicted RBP9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 TATDN2Q93075 761 aa9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 PSMG2Q969U7 264 aa9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 ELSPBP1Q96BH3 223 aa9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 ZSWIM3Q96MP5 696 aa9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 TWNKQ96RR1 684 aa9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 TRMT61BQ9BVS5 477 aaKnown RBP9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 SNX25Q9H3E2 840 aa9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 DPEP3Q9H4B8 488 aa9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 BRD9Q9H8M2 597 aa9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 VRTNQ9H8Y1 702 aa9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 TBC1D17Q9HA65 648 aa9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 CBX8Q9HC52 389 aa9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 TMEM8AQ9HCN3 771 aa9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 SIX2Q9NPC8 291 aa9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 TMEM30AQ9NV96 361 aa9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 GDAP2Q9NXN4 497 aa9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 MAGED2Q9UNF1 606 aaPredicted RBP9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 COQ4Q9Y3A0 265 aa9.34□□□□□ -0.91
PDLIM5-213ENST00000509357 WDFY4Q6ZS81 3184 aa9.33□□□□□ -0.92
PDLIM5-213ENST00000509357 MUC6Q6W4X9 2439 aa9.33□□□□□ -0.92
PDLIM5-213ENST00000509357 DENND4CQ5VZ89 1909 aa9.33□□□□□ -0.92
PDLIM5-213ENST00000509357 GABRDO14764 452 aa9.33□□□□□ -0.92
PDLIM5-213ENST00000509357 ZNF263O14978 683 aa9.33□□□□□ -0.92
PDLIM5-213ENST00000509357 GALR2O43603 387 aaPredicted RBP9.33□□□□□ -0.92
PDLIM5-213ENST00000509357 PI15O43692 258 aa9.33□□□□□ -0.92
PDLIM5-213ENST00000509357 ATP2C2O75185 946 aa9.33□□□□□ -0.92
PDLIM5-213ENST00000509357 STAU1O95793 577 aaKnown RBP9.33□□□□□ -0.92
PDLIM5-213ENST00000509357 CALCAP01258 141 aa9.33□□□□□ -0.92
PDLIM5-213ENST00000509357 NPR3P17342 541 aa9.33□□□□□ -0.92
PDLIM5-213ENST00000509357 CDC25CP30307 473 aa9.33□□□□□ -0.92
PDLIM5-213ENST00000509357 GDI1P31150 447 aa9.33□□□□□ -0.92
PDLIM5-213ENST00000509357 GNL1P36915 607 aaPredicted RBP9.33□□□□□ -0.92
PDLIM5-213ENST00000509357 VIPR2P41587 438 aa9.33□□□□□ -0.92
PDLIM5-213ENST00000509357 KLK7P49862 253 aa9.33□□□□□ -0.92
PDLIM5-213ENST00000509357 MXI1P50539 228 aa9.33□□□□□ -0.92
PDLIM5-213ENST00000509357 AP3M2P53677 418 aa9.33□□□□□ -0.92
PDLIM5-213ENST00000509357 EPHA5P54756 1037 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms