RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 C4orf50Q6ZRC1 276 aa17.23■□□□□ 0.35
PDLIM5-212ENST00000509333 TAS1R2Q8TE23 839 aa17.23■□□□□ 0.35
PDLIM5-212ENST00000509333 PCED1BQ96HM7 432 aa17.23■□□□□ 0.35
PDLIM5-212ENST00000509333 MYRFLQ96LU7 910 aa17.23■□□□□ 0.35
PDLIM5-212ENST00000509333 TSG101Q99816 390 aa17.23■□□□□ 0.35
PDLIM5-212ENST00000509333 SLC46A2Q9BY10 475 aa17.23■□□□□ 0.35
PDLIM5-212ENST00000509333 FBXL21Q9UKT6 434 aa17.23■□□□□ 0.35
PDLIM5-212ENST00000509333 TSC2P49815 1807 aa17.23■□□□□ 0.35
PDLIM5-212ENST00000509333 TRIM49BA6NDI0 452 aa17.22■□□□□ 0.35
PDLIM5-212ENST00000509333 A8MXQ7 604 aa17.22■□□□□ 0.35
PDLIM5-212ENST00000509333 CSH1P0DML2 217 aa17.22■□□□□ 0.35
PDLIM5-212ENST00000509333 CSH2P0DML3 217 aa17.22■□□□□ 0.35
PDLIM5-212ENST00000509333 BDNFP23560 247 aa17.22■□□□□ 0.35
PDLIM5-212ENST00000509333 WEE1P30291 646 aa17.22■□□□□ 0.35
PDLIM5-212ENST00000509333 VCPP55072 806 aaKnown RBP17.22■□□□□ 0.35
PDLIM5-212ENST00000509333 NLRP12P59046 1061 aa17.22■□□□□ 0.35
PDLIM5-212ENST00000509333 STXBP5Q5T5C0 1151 aa17.22■□□□□ 0.35
PDLIM5-212ENST00000509333 SPOPLQ6IQ16 392 aa17.22■□□□□ 0.35
PDLIM5-212ENST00000509333 VSTM1Q6UX27 236 aa17.22■□□□□ 0.35
PDLIM5-212ENST00000509333 FILIP1Q7Z7B0 1213 aa17.22■□□□□ 0.35
PDLIM5-212ENST00000509333 GPIHBP1Q8IV16 184 aa17.22■□□□□ 0.35
PDLIM5-212ENST00000509333 ARID3BQ8IVW6 561 aaPredicted RBP17.22■□□□□ 0.35
PDLIM5-212ENST00000509333 SUGP1Q8IWZ8 645 aaKnown RBP17.22■□□□□ 0.35
PDLIM5-212ENST00000509333 CRYBG2Q8N1P7 616 aa17.22■□□□□ 0.35
PDLIM5-212ENST00000509333 ZSCAN18Q8TBC5 510 aaPredicted RBP17.22■□□□□ 0.35
PDLIM5-212ENST00000509333 MYLPFQ96A32 169 aa17.22■□□□□ 0.35
PDLIM5-212ENST00000509333 RSPRY1Q96DX4 576 aa17.22■□□□□ 0.35
PDLIM5-212ENST00000509333 LRRC3BQ96PB8 259 aa17.22■□□□□ 0.35
PDLIM5-212ENST00000509333 DUSP9Q99956 384 aaKnown RBP17.22■□□□□ 0.35
PDLIM5-212ENST00000509333 B3GNT5Q9BYG0 378 aa17.22■□□□□ 0.35
PDLIM5-212ENST00000509333 DPEP3Q9H4B8 488 aa17.22■□□□□ 0.35
PDLIM5-212ENST00000509333 TASP1Q9H6P5 420 aa17.22■□□□□ 0.35
PDLIM5-212ENST00000509333 SMYD3Q9H7B4 428 aa17.22■□□□□ 0.35
PDLIM5-212ENST00000509333 APOBEC3GQ9HC16 384 aaKnown RBP17.22■□□□□ 0.35
PDLIM5-212ENST00000509333 TMEM8AQ9HCN3 771 aa17.22■□□□□ 0.35
PDLIM5-212ENST00000509333 SLC38A8A6NNN8 435 aa17.21■□□□□ 0.35
PDLIM5-212ENST00000509333 BIN1O00499 593 aa17.21■□□□□ 0.35
PDLIM5-212ENST00000509333 PI15O43692 258 aa17.21■□□□□ 0.35
PDLIM5-212ENST00000509333 NOL4O94818 638 aa17.21■□□□□ 0.35
PDLIM5-212ENST00000509333 EPB41P11171 864 aaKnown RBP17.21■□□□□ 0.35
PDLIM5-212ENST00000509333 PPP1R2P41236 205 aa17.21■□□□□ 0.35
PDLIM5-212ENST00000509333 RAP1GAPP47736 663 aa17.21■□□□□ 0.35
PDLIM5-212ENST00000509333 STIM1Q13586 685 aa17.21■□□□□ 0.35
PDLIM5-212ENST00000509333 CAMK4Q16566 473 aa17.21■□□□□ 0.35
PDLIM5-212ENST00000509333 SLC44A4Q53GD3 710 aa17.21■□□□□ 0.35
PDLIM5-212ENST00000509333 MDH1BQ5I0G3 518 aa17.21■□□□□ 0.35
PDLIM5-212ENST00000509333 GPR158Q5T848 1215 aa17.21■□□□□ 0.35
PDLIM5-212ENST00000509333 KRT39Q6A163 491 aa17.21■□□□□ 0.35
PDLIM5-212ENST00000509333 ASTLQ6HA08 431 aaPredicted RBP17.21■□□□□ 0.35
PDLIM5-212ENST00000509333 PAQR9Q6ZVX9 377 aa17.21■□□□□ 0.35
PDLIM5-212ENST00000509333 SCN4BQ8IWT1 228 aa17.21■□□□□ 0.35
PDLIM5-212ENST00000509333 SIX5Q8N196 739 aa17.21■□□□□ 0.35
PDLIM5-212ENST00000509333 SEMA4DQ92854 862 aa17.21■□□□□ 0.35
PDLIM5-212ENST00000509333 SPATA17Q96L03 361 aa17.21■□□□□ 0.35
PDLIM5-212ENST00000509333 KIAA1468Q9P260 1216 aa17.21■□□□□ 0.35
PDLIM5-212ENST00000509333 SOBPA7XYQ1 873 aa17.2■□□□□ 0.34
PDLIM5-212ENST00000509333 PSMA7O14818 248 aa17.2■□□□□ 0.34
PDLIM5-212ENST00000509333 P4HA1P13674 534 aa17.2■□□□□ 0.34
PDLIM5-212ENST00000509333 PSMC3P17980 439 aa17.2■□□□□ 0.34
PDLIM5-212ENST00000509333 CDC25CP30307 473 aa17.2■□□□□ 0.34
PDLIM5-212ENST00000509333 GRIK1P39086 918 aa17.2■□□□□ 0.34
PDLIM5-212ENST00000509333 STARD6P59095 220 aa17.2■□□□□ 0.34
PDLIM5-212ENST00000509333 CYP27A1Q02318 531 aa17.2■□□□□ 0.34
PDLIM5-212ENST00000509333 TTI2Q6NXR4 508 aa17.2■□□□□ 0.34
PDLIM5-212ENST00000509333 FOXR2Q6PJQ5 311 aa17.2■□□□□ 0.34
PDLIM5-212ENST00000509333 VITQ6UXI7 678 aa17.2■□□□□ 0.34
PDLIM5-212ENST00000509333 MFSD6LQ8IWD5 586 aa17.2■□□□□ 0.34
PDLIM5-212ENST00000509333 B3GALNT2Q8NCR0 500 aa17.2■□□□□ 0.34
PDLIM5-212ENST00000509333 STKLD1Q8NE28 680 aa17.2■□□□□ 0.34
PDLIM5-212ENST00000509333 E2F7Q96AV8 911 aa17.2■□□□□ 0.34
PDLIM5-212ENST00000509333 C8orf48Q96LL4 319 aa17.2■□□□□ 0.34
PDLIM5-212ENST00000509333 CEP295NLQ96MC4 621 aa17.2■□□□□ 0.34
PDLIM5-212ENST00000509333 BCO2Q9BYV7 579 aa17.2■□□□□ 0.34
PDLIM5-212ENST00000509333 KCNH6Q9H252 994 aa17.2■□□□□ 0.34
PDLIM5-212ENST00000509333 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.2■□□□□ 0.342e-6■■■■■ 86.5
PDLIM5-212ENST00000509333 CA14Q9ULX7 337 aa17.2■□□□□ 0.34
PDLIM5-212ENST00000509333 HCN4Q9Y3Q4 1203 aa17.2■□□□□ 0.34
PDLIM5-212ENST00000509333 F5P12259 2224 aa17.19■□□□□ 0.34
PDLIM5-212ENST00000509333 HEPACAM2A8MVW5 462 aa17.19■□□□□ 0.34
PDLIM5-212ENST00000509333 CLDN5O00501 218 aa17.19■□□□□ 0.34
PDLIM5-212ENST00000509333 SLC16A3O15427 465 aaKnown RBP17.19■□□□□ 0.34
PDLIM5-212ENST00000509333 ASPAP45381 313 aa17.19■□□□□ 0.34
PDLIM5-212ENST00000509333 ARHGAP15Q53QZ3 475 aa17.19■□□□□ 0.34
PDLIM5-212ENST00000509333 PHLDB3Q6NSJ2 640 aa17.19■□□□□ 0.34
PDLIM5-212ENST00000509333 FRMD5Q7Z6J6 570 aa17.19■□□□□ 0.34
PDLIM5-212ENST00000509333 MON1AQ86VX9 555 aa17.19■□□□□ 0.34
PDLIM5-212ENST00000509333 UNC93AQ86WB7 457 aa17.19■□□□□ 0.34
PDLIM5-212ENST00000509333 TMEM105Q8N8V8 129 aa17.19■□□□□ 0.34
PDLIM5-212ENST00000509333 FLCNQ8NFG4 579 aa17.19■□□□□ 0.34
PDLIM5-212ENST00000509333 NELFBQ8WX92 580 aa17.19■□□□□ 0.34
PDLIM5-212ENST00000509333 TRMT2BQ96GJ1 504 aaKnown RBP17.19■□□□□ 0.34
PDLIM5-212ENST00000509333 TRMT61BQ9BVS5 477 aaKnown RBP17.19■□□□□ 0.34
PDLIM5-212ENST00000509333 MFSD1Q9H3U5 465 aa17.19■□□□□ 0.34
PDLIM5-212ENST00000509333 SLITRK6Q9H5Y7 841 aa17.19■□□□□ 0.34
PDLIM5-212ENST00000509333 MMRN2Q9H8L6 949 aa17.19■□□□□ 0.34
PDLIM5-212ENST00000509333 CYP3A43Q9HB55 503 aa17.19■□□□□ 0.34
PDLIM5-212ENST00000509333 TMEM30AQ9NV96 361 aa17.19■□□□□ 0.34
PDLIM5-212ENST00000509333 RAB20Q9NX57 234 aa17.19■□□□□ 0.34
PDLIM5-212ENST00000509333 ARMCX3Q9UH62 379 aaPredicted RBP17.19■□□□□ 0.34
PDLIM5-212ENST00000509333 MAGED2Q9UNF1 606 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms