RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 FAM83CQ9BQN1 747 aa13.41□□□□□ -0.26
PDPN-208ENST00000509009 BLZF1Q9H2G9 400 aa13.41□□□□□ -0.26
PDPN-208ENST00000509009 AGPAT3Q9NRZ7 376 aa13.41□□□□□ -0.26
PDPN-208ENST00000509009 THG1LQ9NWX6 298 aaKnown RBP13.41□□□□□ -0.26
PDPN-208ENST00000509009 MAGED2Q9UNF1 606 aaPredicted RBP13.41□□□□□ -0.26
PDPN-208ENST00000509009 PVALEFA0A1B0GWK0 134 aa13.4□□□□□ -0.26
PDPN-208ENST00000509009 HSP90AA1P07900 732 aaKnown RBP13.4□□□□□ -0.26
PDPN-208ENST00000509009 ID4P47928 161 aa13.4□□□□□ -0.26
PDPN-208ENST00000509009 CXCL12P48061 93 aa13.4□□□□□ -0.26
PDPN-208ENST00000509009 ME1P48163 572 aa13.4□□□□□ -0.26
PDPN-208ENST00000509009 CCR3P51677 355 aa13.4□□□□□ -0.26
PDPN-208ENST00000509009 NRLP54845 237 aa13.4□□□□□ -0.26
PDPN-208ENST00000509009 CUL4BQ13620 913 aa13.4□□□□□ -0.26
PDPN-208ENST00000509009 PKP1Q13835 747 aa13.4□□□□□ -0.26
PDPN-208ENST00000509009 SNRNP35Q16560 246 aaKnown RBP13.4□□□□□ -0.26
PDPN-208ENST00000509009 ITPRIPL2Q3MIP1 535 aa13.4□□□□□ -0.26
PDPN-208ENST00000509009 CFAP221Q4G0U5 840 aa13.4□□□□□ -0.26
PDPN-208ENST00000509009 SPATA2LQ8IUW3 424 aaPredicted RBP13.4□□□□□ -0.26
PDPN-208ENST00000509009 WDR49Q8IV35 697 aa13.4□□□□□ -0.26
PDPN-208ENST00000509009 NELFCDQ8IXH7 590 aa13.4□□□□□ -0.26
PDPN-208ENST00000509009 SPEM1Q8N4L4 309 aa13.4□□□□□ -0.26
PDPN-208ENST00000509009 KBTBD7Q8WVZ9 684 aa13.4□□□□□ -0.26
PDPN-208ENST00000509009 FUBP3Q96I24 572 aaKnown RBP eCLIP13.4□□□□□ -0.26
PDPN-208ENST00000509009 MAGEF1Q9HAY2 307 aa13.4□□□□□ -0.26
PDPN-208ENST00000509009 SLC39A2Q9NP94 309 aa13.4□□□□□ -0.26
PDPN-208ENST00000509009 RBM12Q9NTZ6 932 aaKnown RBP13.4□□□□□ -0.26
PDPN-208ENST00000509009 TDP1Q9NUW8 608 aa13.4□□□□□ -0.26
PDPN-208ENST00000509009 FAM13BQ9NYF5 915 aa13.4□□□□□ -0.26
PDPN-208ENST00000509009 CCL26Q9Y258 94 aa13.4□□□□□ -0.26
PDPN-208ENST00000509009 TSC2P49815 1807 aa13.4□□□□□ -0.26
PDPN-208ENST00000509009 CACNA1AO00555 2505 aa13.39□□□□□ -0.27
PDPN-208ENST00000509009 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.39□□□□□ -0.27
PDPN-208ENST00000509009 NOL4O94818 638 aa13.39□□□□□ -0.27
PDPN-208ENST00000509009 PDGFRBP09619 1106 aa13.39□□□□□ -0.27
PDPN-208ENST00000509009 FAM163BP0C2L3 166 aa13.39□□□□□ -0.27
PDPN-208ENST00000509009 DLATP10515 647 aaKnown RBP13.39□□□□□ -0.27
PDPN-208ENST00000509009 TNNI1P19237 187 aa13.39□□□□□ -0.27
PDPN-208ENST00000509009 WARSP23381 471 aaKnown RBP13.39□□□□□ -0.27
PDPN-208ENST00000509009 AVPR1AP37288 418 aa13.39□□□□□ -0.27
PDPN-208ENST00000509009 MAGEA11P43364 429 aa13.39□□□□□ -0.27
PDPN-208ENST00000509009 AFMP43652 599 aa13.39□□□□□ -0.27
PDPN-208ENST00000509009 CYP2J2P51589 502 aa13.39□□□□□ -0.27
PDPN-208ENST00000509009 SATB1Q01826 763 aa13.39□□□□□ -0.27
PDPN-208ENST00000509009 DNM1Q05193 864 aaKnown RBP13.39□□□□□ -0.27
PDPN-208ENST00000509009 CYP24A1Q07973 514 aa13.39□□□□□ -0.27
PDPN-208ENST00000509009 LRRC32Q14392 662 aa13.39□□□□□ -0.27
PDPN-208ENST00000509009 PSMD6Q15008 389 aa13.39□□□□□ -0.27
PDPN-208ENST00000509009 PON2Q15165 354 aa13.39□□□□□ -0.27
PDPN-208ENST00000509009 DGKKQ5KSL6 1271 aa13.39□□□□□ -0.27
PDPN-208ENST00000509009 SCN4BQ8IWT1 228 aa13.39□□□□□ -0.27
PDPN-208ENST00000509009 XXYLT1Q8NBI6 393 aa13.39□□□□□ -0.27
PDPN-208ENST00000509009 SPRYD3Q8NCJ5 442 aa13.39□□□□□ -0.27
PDPN-208ENST00000509009 ZNF516Q92618 1163 aa13.39□□□□□ -0.27
PDPN-208ENST00000509009 MRPS31Q92665 395 aaKnown RBP13.39□□□□□ -0.27
PDPN-208ENST00000509009 CCDC127Q96BQ5 260 aa13.39□□□□□ -0.27
PDPN-208ENST00000509009 TRMT2BQ96GJ1 504 aaKnown RBP13.39□□□□□ -0.27
PDPN-208ENST00000509009 CYP2S1Q96SQ9 504 aa13.39□□□□□ -0.27
PDPN-208ENST00000509009 MMS19Q96T76 1030 aa13.39□□□□□ -0.27
PDPN-208ENST00000509009 HINFPQ9BQA5 517 aa13.39□□□□□ -0.27
PDPN-208ENST00000509009 GZF1Q9H116 711 aaPredicted RBP13.39□□□□□ -0.27
PDPN-208ENST00000509009 EPC1Q9H2F5 836 aa13.39□□□□□ -0.27
PDPN-208ENST00000509009 CRTAC1Q9NQ79 661 aa13.39□□□□□ -0.27
PDPN-208ENST00000509009 MAGEC2Q9UBF1 373 aaPredicted RBP13.39□□□□□ -0.27
PDPN-208ENST00000509009 UXTQ9UBK9 157 aaPredicted RBP13.39□□□□□ -0.27
PDPN-208ENST00000509009 CFAP45Q9UL16 551 aa13.39□□□□□ -0.27
PDPN-208ENST00000509009 CDH9Q9ULB4 789 aa13.39□□□□□ -0.27
PDPN-208ENST00000509009 TICRRQ7Z2Z1 1910 aa13.39□□□□□ -0.27
PDPN-208ENST00000509009 COL4A2P08572 1712 aa13.39□□□□□ -0.27
PDPN-208ENST00000509009 DCHS1Q96JQ0 3298 aa13.38□□□□□ -0.27
PDPN-208ENST00000509009 OTOL1A6NHN0 477 aaPredicted RBP13.38□□□□□ -0.27
PDPN-208ENST00000509009 GNL1P36915 607 aaPredicted RBP13.38□□□□□ -0.27
PDPN-208ENST00000509009 FOXK2Q01167 660 aa13.38□□□□□ -0.27
PDPN-208ENST00000509009 RUNX3Q13761 415 aa13.38□□□□□ -0.27
PDPN-208ENST00000509009 ZNF268Q14587 947 aaPredicted RBP13.38□□□□□ -0.27
PDPN-208ENST00000509009 PPP2R5DQ14738 602 aa13.38□□□□□ -0.27
PDPN-208ENST00000509009 KNOP1Q1ED39 458 aaKnown RBP13.38□□□□□ -0.27
PDPN-208ENST00000509009 BMT2Q1RMZ1 405 aa13.38□□□□□ -0.27
PDPN-208ENST00000509009 C4orf50Q6ZRC1 276 aa13.38□□□□□ -0.27
PDPN-208ENST00000509009 HS2ST1Q7LGA3 356 aa13.38□□□□□ -0.27
PDPN-208ENST00000509009 C12orf56Q8IXR9 622 aa13.38□□□□□ -0.27
PDPN-208ENST00000509009 GRAMD1CQ8IYS0 662 aa13.38□□□□□ -0.27
PDPN-208ENST00000509009 RIN3Q8TB24 985 aa13.38□□□□□ -0.27
PDPN-208ENST00000509009 FNBP1Q96RU3 617 aa13.38□□□□□ -0.27
PDPN-208ENST00000509009 SYT15Q9BQS2 421 aa13.38□□□□□ -0.27
PDPN-208ENST00000509009 MRPL45Q9BRJ2 306 aaKnown RBP13.38□□□□□ -0.27
PDPN-208ENST00000509009 HPS4Q9NQG7 708 aa13.38□□□□□ -0.27
PDPN-208ENST00000509009 C2orf42Q9NWW7 574 aa13.38□□□□□ -0.27
PDPN-208ENST00000509009 CGNQ9P2M7 1197 aaKnown RBP13.38□□□□□ -0.27
PDPN-208ENST00000509009 SERTAD1Q9UHV2 236 aa13.38□□□□□ -0.27
PDPN-208ENST00000509009 TCHHQ07283 1943 aa13.38□□□□□ -0.27
PDPN-208ENST00000509009 PATJQ8NI35 1801 aa13.38□□□□□ -0.27
PDPN-208ENST00000509009 UBE4BO95155 1302 aa13.38□□□□□ -0.27
PDPN-208ENST00000509009 KLRC4O43908 158 aa13.37□□□□□ -0.27
PDPN-208ENST00000509009 TACC1O75410 805 aa13.37□□□□□ -0.27
PDPN-208ENST00000509009 TADA3O75528 432 aa13.37□□□□□ -0.27
PDPN-208ENST00000509009 SLFN14P0C7P3 912 aa13.37□□□□□ -0.27
PDPN-208ENST00000509009 BDNFP23560 247 aa13.37□□□□□ -0.27
PDPN-208ENST00000509009 PSMC1P62191 440 aaKnown RBP13.37□□□□□ -0.27
PDPN-208ENST00000509009 CCINQ13939 588 aa13.37□□□□□ -0.27
PDPN-208ENST00000509009 TRIM68Q6AZZ1 485 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms