RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 FAM171BQ6P995 826 aa9.28□□□□□ -0.92
SNCA-211ENST00000508895 VITQ6UXI7 678 aa9.28□□□□□ -0.92
SNCA-211ENST00000508895 INTS8Q75QN2 995 aaKnown RBP9.28□□□□□ -0.92
SNCA-211ENST00000508895 ADGRF2Q8IZF7 708 aa9.28□□□□□ -0.92
SNCA-211ENST00000508895 MLKLQ8NB16 471 aa9.28□□□□□ -0.92
SNCA-211ENST00000508895 FLCNQ8NFG4 579 aa9.28□□□□□ -0.92
SNCA-211ENST00000508895 CACTINQ8WUQ7 758 aaKnown RBP9.28□□□□□ -0.92
SNCA-211ENST00000508895 SYAP1Q96A49 352 aaPredicted RBP9.28□□□□□ -0.92
SNCA-211ENST00000508895 ANKRD36BP1Q96IX9 119 aa9.28□□□□□ -0.92
SNCA-211ENST00000508895 ZNF560Q96MR9 790 aa9.28□□□□□ -0.92
SNCA-211ENST00000508895 ASB16Q96NS5 453 aa9.28□□□□□ -0.92
SNCA-211ENST00000508895 FUCA2Q9BTY2 467 aa9.28□□□□□ -0.92
SNCA-211ENST00000508895 SMYD3Q9H7B4 428 aa9.28□□□□□ -0.92
SNCA-211ENST00000508895 HMGXB4Q9UGU5 601 aa9.28□□□□□ -0.92
SNCA-211ENST00000508895 RWDD2AQ9UIY3 292 aa9.28□□□□□ -0.92
SNCA-211ENST00000508895 FRMD4BQ9Y2L6 1034 aa9.28□□□□□ -0.92
SNCA-211ENST00000508895 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.28□□□□□ -0.92
SNCA-211ENST00000508895 RIF1Q5UIP0 2472 aaKnown RBP9.28□□□□□ -0.92
SNCA-211ENST00000508895 FANCMQ8IYD8 2048 aa9.27□□□□□ -0.92
SNCA-211ENST00000508895 CHD6Q8TD26 2715 aa9.27□□□□□ -0.92
SNCA-211ENST00000508895 KMT2BQ9UMN6 2715 aaPredicted RBP9.27□□□□□ -0.92
SNCA-211ENST00000508895 MYO15AQ9UKN7 3530 aa9.27□□□□□ -0.93
SNCA-211ENST00000508895 DMDP11532 3685 aa9.27□□□□□ -0.93
SNCA-211ENST00000508895 SYCE3A1L190 88 aa9.27□□□□□ -0.93
SNCA-211ENST00000508895 CLDN5O00501 218 aa9.27□□□□□ -0.93
SNCA-211ENST00000508895 CETN3O15182 167 aa9.27□□□□□ -0.93
SNCA-211ENST00000508895 HUS1O60921 280 aa9.27□□□□□ -0.93
SNCA-211ENST00000508895 TNNC2P02585 160 aa9.27□□□□□ -0.93
SNCA-211ENST00000508895 F11P03951 625 aa9.27□□□□□ -0.93
SNCA-211ENST00000508895 DCNP07585 359 aaKnown RBP9.27□□□□□ -0.93
SNCA-211ENST00000508895 EPB41P11171 864 aaKnown RBP9.27□□□□□ -0.93
SNCA-211ENST00000508895 TNNI1P19237 187 aa9.27□□□□□ -0.93
SNCA-211ENST00000508895 WARSP23381 471 aaKnown RBP9.27□□□□□ -0.93
SNCA-211ENST00000508895 PSMC2P35998 433 aaKnown RBP9.27□□□□□ -0.93
SNCA-211ENST00000508895 VAMP7P51809 220 aa9.27□□□□□ -0.93
SNCA-211ENST00000508895 USP46P62068 366 aa9.27□□□□□ -0.93
SNCA-211ENST00000508895 ENPEPQ07075 957 aa9.27□□□□□ -0.93
SNCA-211ENST00000508895 PLD1Q13393 1074 aa9.27□□□□□ -0.93
SNCA-211ENST00000508895 FZD5Q13467 585 aa9.27□□□□□ -0.93
SNCA-211ENST00000508895 MGAT5BQ3V5L5 792 aa9.27□□□□□ -0.93
SNCA-211ENST00000508895 ELMSAN1Q6PJG2 1045 aa9.27□□□□□ -0.93
SNCA-211ENST00000508895 PAQR9Q6ZVX9 377 aa9.27□□□□□ -0.93
SNCA-211ENST00000508895 PDZD4Q76G19 769 aaPredicted RBP9.27□□□□□ -0.93
SNCA-211ENST00000508895 RTL10Q7L3V2 364 aa9.27□□□□□ -0.93
SNCA-211ENST00000508895 TOP6BLQ8N6T0 577 aa9.27□□□□□ -0.93
SNCA-211ENST00000508895 TMC2Q8TDI7 906 aa9.27□□□□□ -0.93
SNCA-211ENST00000508895 PSMG2Q969U7 264 aa9.27□□□□□ -0.93
SNCA-211ENST00000508895 ZNF512Q96ME7 567 aaPredicted RBP9.27□□□□□ -0.93
SNCA-211ENST00000508895 CEP63Q96MT8 703 aa9.27□□□□□ -0.93
SNCA-211ENST00000508895 FNBP1Q96RU3 617 aa9.27□□□□□ -0.93
SNCA-211ENST00000508895 SLC22A12Q96S37 553 aa9.27□□□□□ -0.93
SNCA-211ENST00000508895 TBC1D17Q9HA65 648 aa9.27□□□□□ -0.93
SNCA-211ENST00000508895 APOBEC3GQ9HC16 384 aaKnown RBP9.27□□□□□ -0.93
SNCA-211ENST00000508895 SLC2A4RGQ9NR83 387 aa9.27□□□□□ -0.93
SNCA-211ENST00000508895 DLGAP2Q9P1A6 1054 aa9.27□□□□□ -0.93
SNCA-211ENST00000508895 TPRP12270 2363 aaKnown RBP9.26□□□□□ -0.93
SNCA-211ENST00000508895 ARNTLO00327 626 aa9.26□□□□□ -0.93
SNCA-211ENST00000508895 GABRR2P28476 465 aa9.26□□□□□ -0.93
SNCA-211ENST00000508895 ERCC5P28715 1186 aaPredicted RBP9.26□□□□□ -0.93
SNCA-211ENST00000508895 PNPLA4P41247 253 aa9.26□□□□□ -0.93
SNCA-211ENST00000508895 PGFP49763 221 aa9.26□□□□□ -0.93
SNCA-211ENST00000508895 MARSP56192 900 aaKnown RBP9.26□□□□□ -0.93
SNCA-211ENST00000508895 ZSCAN23Q3MJ62 389 aa9.26□□□□□ -0.93
SNCA-211ENST00000508895 ZACNQ401N2 412 aa9.26□□□□□ -0.93
SNCA-211ENST00000508895 ASTLQ6HA08 431 aaPredicted RBP9.26□□□□□ -0.93
SNCA-211ENST00000508895 SASS6Q6UVJ0 657 aa9.26□□□□□ -0.93
SNCA-211ENST00000508895 SCARA5Q6ZMJ2 495 aa9.26□□□□□ -0.93
SNCA-211ENST00000508895 SV2AQ7L0J3 742 aa9.26□□□□□ -0.93
SNCA-211ENST00000508895 METTL23Q86XA0 190 aa9.26□□□□□ -0.93
SNCA-211ENST00000508895 IRF2BP1Q8IU81 584 aa9.26□□□□□ -0.93
SNCA-211ENST00000508895 ZNF687Q8N1G0 1237 aa9.26□□□□□ -0.93
SNCA-211ENST00000508895 THEM5Q8N1Q8 247 aa9.26□□□□□ -0.93
SNCA-211ENST00000508895 ZSCAN18Q8TBC5 510 aaPredicted RBP9.26□□□□□ -0.93
SNCA-211ENST00000508895 SEMA4DQ92854 862 aa9.26□□□□□ -0.93
SNCA-211ENST00000508895 SLC35C1Q96A29 364 aa9.26□□□□□ -0.93
SNCA-211ENST00000508895 MYLPFQ96A32 169 aa9.26□□□□□ -0.93
SNCA-211ENST00000508895 ZFYVE19Q96K21 471 aa9.26□□□□□ -0.93
SNCA-211ENST00000508895 TWNKQ96RR1 684 aa9.26□□□□□ -0.93
SNCA-211ENST00000508895 SYT15Q9BQS2 421 aa9.26□□□□□ -0.93
SNCA-211ENST00000508895 ACBD6Q9BR61 282 aa9.26□□□□□ -0.93
SNCA-211ENST00000508895 SLC46A2Q9BY10 475 aa9.26□□□□□ -0.93
SNCA-211ENST00000508895 B3GNT5Q9BYG0 378 aa9.26□□□□□ -0.93
SNCA-211ENST00000508895 ASAH2Q9NR71 780 aa9.26□□□□□ -0.93
SNCA-211ENST00000508895 HEBP1Q9NRV9 189 aa9.26□□□□□ -0.93
SNCA-211ENST00000508895 NXF1Q9UBU9 619 aaKnown RBP9.26□□□□□ -0.93
SNCA-211ENST00000508895 WNT16Q9UBV4 365 aa9.26□□□□□ -0.93
SNCA-211ENST00000508895 DACH1Q9UI36 760 aa9.26□□□□□ -0.93
SNCA-211ENST00000508895 FBXL21Q9UKT6 434 aa9.26□□□□□ -0.93
SNCA-211ENST00000508895 DSEQ9UL01 958 aa9.26□□□□□ -0.93
SNCA-211ENST00000508895 CCL26Q9Y258 94 aa9.26□□□□□ -0.93
SNCA-211ENST00000508895 PCDHB5Q9Y5E4 795 aa9.26□□□□□ -0.93
SNCA-211ENST00000508895 ANTXRLA6NF34 631 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 SLC38A8A6NNN8 435 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 HEPACAM2A8MVW5 462 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 H0Y858 1186 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 ECI2O75521 394 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 HLA-DRAP01903 254 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 KRT13P13646 458 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 AOC1P19801 751 aa9.25□□□□□ -0.93
SNCA-211ENST00000508895 BDNFP23560 247 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms