RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 NELL2Q99435 816 aa5.84□□□□□ -1.47
UBE2D3-225ENST00000508476 PTDSS2Q9BVG9 487 aa5.84□□□□□ -1.47
UBE2D3-225ENST00000508476 ZMAT3Q9HA38 289 aaKnown RBP5.84□□□□□ -1.47
UBE2D3-225ENST00000508476 NOB1Q9ULX3 412 aaKnown RBP5.84□□□□□ -1.47
UBE2D3-225ENST00000508476 PADI4Q9UM07 663 aa5.84□□□□□ -1.47
UBE2D3-225ENST00000508476 H0YIZ8 118 aa5.83□□□□□ -1.48
UBE2D3-225ENST00000508476 KITP10721 976 aa5.83□□□□□ -1.48
UBE2D3-225ENST00000508476 SRSF4Q08170 494 aaKnown RBP5.83□□□□□ -1.48
UBE2D3-225ENST00000508476 PLAC9Q5JTB6 97 aa5.83□□□□□ -1.48
UBE2D3-225ENST00000508476 ODR4Q5SWX8 454 aa5.83□□□□□ -1.48
UBE2D3-225ENST00000508476 ZNF618Q5T7W0 954 aa5.83□□□□□ -1.48
UBE2D3-225ENST00000508476 OVCH2Q7RTZ1 564 aa5.83□□□□□ -1.48
UBE2D3-225ENST00000508476 CNNM1Q9NRU3 951 aa5.83□□□□□ -1.48
UBE2D3-225ENST00000508476 DLL3Q9NYJ7 618 aa5.83□□□□□ -1.48
UBE2D3-225ENST00000508476 NDRG4Q9ULP0 352 aaKnown RBP5.83□□□□□ -1.48
UBE2D3-225ENST00000508476 ZNF213O14771 459 aa5.82□□□□□ -1.48
UBE2D3-225ENST00000508476 RFPL1O75677 317 aa5.82□□□□□ -1.48
UBE2D3-225ENST00000508476 NXPH3O95157 252 aa5.82□□□□□ -1.48
UBE2D3-225ENST00000508476 FESP07332 822 aa5.82□□□□□ -1.48
UBE2D3-225ENST00000508476 NHLRC4P0CG21 123 aaPredicted RBP5.82□□□□□ -1.48
UBE2D3-225ENST00000508476 NDUFB7P17568 137 aa5.82□□□□□ -1.48
UBE2D3-225ENST00000508476 LMO1P25800 156 aa5.82□□□□□ -1.48
UBE2D3-225ENST00000508476 PPIFP30405 207 aaKnown RBP5.82□□□□□ -1.48
UBE2D3-225ENST00000508476 VIPR2P41587 438 aa5.82□□□□□ -1.48
UBE2D3-225ENST00000508476 ARFIP2P53365 341 aa5.82□□□□□ -1.48
UBE2D3-225ENST00000508476 SFRP4Q6FHJ7 346 aaPredicted RBP5.82□□□□□ -1.48
UBE2D3-225ENST00000508476 DNAJC5GQ8N7S2 189 aa5.82□□□□□ -1.48
UBE2D3-225ENST00000508476 HASPINQ8TF76 798 aa5.82□□□□□ -1.48
UBE2D3-225ENST00000508476 CAMKK2Q96RR4 588 aa5.82□□□□□ -1.48
UBE2D3-225ENST00000508476 B3GNT5Q9BYG0 378 aa5.82□□□□□ -1.48
UBE2D3-225ENST00000508476 TRIM54Q9BYV2 358 aa5.82□□□□□ -1.48
UBE2D3-225ENST00000508476 ATP6V0A4Q9HBG4 840 aa5.82□□□□□ -1.48
UBE2D3-225ENST00000508476 PIH1D1Q9NWS0 290 aaKnown RBP5.82□□□□□ -1.48
UBE2D3-225ENST00000508476 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.82□□□□□ -1.48
UBE2D3-225ENST00000508476 TMX2Q9Y320 296 aa5.82□□□□□ -1.48
UBE2D3-225ENST00000508476 TMEM233B4DJY2 109 aa5.81□□□□□ -1.48
UBE2D3-225ENST00000508476 TARM1B6A8C7 271 aa5.81□□□□□ -1.48
UBE2D3-225ENST00000508476 SLC16A3O15427 465 aaKnown RBP5.81□□□□□ -1.48
UBE2D3-225ENST00000508476 TLR5O60602 858 aa5.81□□□□□ -1.48
UBE2D3-225ENST00000508476 CSF1RP07333 972 aa5.81□□□□□ -1.48
UBE2D3-225ENST00000508476 CYP2C18P33260 490 aa5.81□□□□□ -1.48
UBE2D3-225ENST00000508476 ABCG1P45844 678 aa5.81□□□□□ -1.48
UBE2D3-225ENST00000508476 ALDH9A1P49189 494 aa5.81□□□□□ -1.48
UBE2D3-225ENST00000508476 KRTAP1-1Q07627 177 aa5.81□□□□□ -1.48
UBE2D3-225ENST00000508476 GTF2H3Q13889 308 aa5.81□□□□□ -1.48
UBE2D3-225ENST00000508476 PLEKHG6Q3KR16 790 aa5.81□□□□□ -1.48
UBE2D3-225ENST00000508476 TEDDM1Q5T9Z0 273 aa5.81□□□□□ -1.48
UBE2D3-225ENST00000508476 SWSAP1Q6NVH7 229 aa5.81□□□□□ -1.48
UBE2D3-225ENST00000508476 NPNTQ6UXI9 565 aa5.81□□□□□ -1.48
UBE2D3-225ENST00000508476 ZNF782Q6ZMW2 699 aaPredicted RBP5.81□□□□□ -1.48
UBE2D3-225ENST00000508476 SLC15A4Q8N697 577 aa5.81□□□□□ -1.48
UBE2D3-225ENST00000508476 GLG1Q92896 1179 aa5.81□□□□□ -1.48
UBE2D3-225ENST00000508476 R3HDM4Q96D70 268 aa5.81□□□□□ -1.48
UBE2D3-225ENST00000508476 REPS1Q96D71 796 aa5.81□□□□□ -1.48
UBE2D3-225ENST00000508476 MACROD1Q9BQ69 325 aa5.81□□□□□ -1.48
UBE2D3-225ENST00000508476 CXorf36Q9H7Y0 433 aa5.81□□□□□ -1.48
UBE2D3-225ENST00000508476 SH3BP4Q9P0V3 963 aa5.81□□□□□ -1.48
UBE2D3-225ENST00000508476 COL3A1P02461 1466 aaPredicted RBP5.8□□□□□ -1.48
UBE2D3-225ENST00000508476 A1L4Q6 167 aa5.8□□□□□ -1.48
UBE2D3-225ENST00000508476 ERC2O15083 957 aa5.8□□□□□ -1.48
UBE2D3-225ENST00000508476 TUSC2O75896 110 aa5.8□□□□□ -1.48
UBE2D3-225ENST00000508476 PRKCGP05129 697 aa5.8□□□□□ -1.48
UBE2D3-225ENST00000508476 FAM163BP0C2L3 166 aa5.8□□□□□ -1.48
UBE2D3-225ENST00000508476 ENGP17813 658 aa5.8□□□□□ -1.48
UBE2D3-225ENST00000508476 ADORA2AP29274 412 aa5.8□□□□□ -1.48
UBE2D3-225ENST00000508476 AGFG1P52594 562 aaKnown RBP5.8□□□□□ -1.48
UBE2D3-225ENST00000508476 MYO1EQ12965 1108 aa5.8□□□□□ -1.48
UBE2D3-225ENST00000508476 CTBP1Q13363 440 aa5.8□□□□□ -1.48
UBE2D3-225ENST00000508476 DEPDC1Q5TB30 811 aa5.8□□□□□ -1.48
UBE2D3-225ENST00000508476 RUNDC1Q96C34 613 aa5.8□□□□□ -1.48
UBE2D3-225ENST00000508476 MESP1Q9BRJ9 268 aa5.8□□□□□ -1.48
UBE2D3-225ENST00000508476 SHOC2Q9UQ13 582 aa5.8□□□□□ -1.48
UBE2D3-225ENST00000508476 TBC1D30Q9Y2I9 924 aa5.8□□□□□ -1.48
UBE2D3-225ENST00000508476 A0A087WWL8 130 aa5.79□□□□□ -1.48
UBE2D3-225ENST00000508476 A0A1W2PPL8 197 aa5.79□□□□□ -1.48
UBE2D3-225ENST00000508476 DNAJC9-AS1A6NH13 148 aa5.79□□□□□ -1.48
UBE2D3-225ENST00000508476 BTN3A1O00481 513 aa5.79□□□□□ -1.48
UBE2D3-225ENST00000508476 CTNND1O60716 968 aaKnown RBP5.79□□□□□ -1.48
UBE2D3-225ENST00000508476 VNN1O95497 513 aa5.79□□□□□ -1.48
UBE2D3-225ENST00000508476 SCGB1D2O95969 90 aa5.79□□□□□ -1.48
UBE2D3-225ENST00000508476 ATXN1P54253 815 aaKnown RBP5.79□□□□□ -1.48
UBE2D3-225ENST00000508476 PDE1AP54750 535 aa5.79□□□□□ -1.48
UBE2D3-225ENST00000508476 EEFSECP57772 596 aaKnown RBP5.79□□□□□ -1.48
UBE2D3-225ENST00000508476 E2F2Q14209 437 aa5.79□□□□□ -1.48
UBE2D3-225ENST00000508476 LY6KQ17RY6 165 aa5.79□□□□□ -1.48
UBE2D3-225ENST00000508476 ANO6Q4KMQ2 910 aa5.79□□□□□ -1.48
UBE2D3-225ENST00000508476 PTF1AQ7RTS3 328 aa5.79□□□□□ -1.48
UBE2D3-225ENST00000508476 LRRC71Q8N4P6 559 aa5.79□□□□□ -1.48
UBE2D3-225ENST00000508476 IL31RAQ8NI17 732 aa5.79□□□□□ -1.48
UBE2D3-225ENST00000508476 KBTBD7Q8WVZ9 684 aa5.79□□□□□ -1.48
UBE2D3-225ENST00000508476 RAPGEF4Q8WZA2 1011 aa5.79□□□□□ -1.48
UBE2D3-225ENST00000508476 MOGAT1Q96PD6 335 aa5.79□□□□□ -1.48
UBE2D3-225ENST00000508476 GLOD4Q9HC38 313 aa5.79□□□□□ -1.48
UBE2D3-225ENST00000508476 DUSP22Q9NRW4 184 aa5.79□□□□□ -1.48
UBE2D3-225ENST00000508476 LINC01548A6NM66 108 aa5.78□□□□□ -1.48
UBE2D3-225ENST00000508476 MYO1CO00159 1063 aa5.78□□□□□ -1.48
UBE2D3-225ENST00000508476 QSOX1O00391 747 aa5.78□□□□□ -1.48
UBE2D3-225ENST00000508476 THP07101 528 aa5.78□□□□□ -1.48
UBE2D3-225ENST00000508476 CYP4F2P78329 520 aa5.78□□□□□ -1.48
UBE2D3-225ENST00000508476 HNRNPA0Q13151 305 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms