RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 CCR3P51677 355 aa13.95□□□□□ -0.18
HMGCS1-205ENST00000508319 PLCB2Q00722 1185 aa13.95□□□□□ -0.18
HMGCS1-205ENST00000508319 SATB1Q01826 763 aa13.95□□□□□ -0.18
HMGCS1-205ENST00000508319 MYO1EQ12965 1108 aa13.95□□□□□ -0.18
HMGCS1-205ENST00000508319 CCINQ13939 588 aa13.95□□□□□ -0.18
HMGCS1-205ENST00000508319 SURF1Q15526 300 aa13.95□□□□□ -0.18
HMGCS1-205ENST00000508319 SNRNP35Q16560 246 aaKnown RBP13.95□□□□□ -0.18
HMGCS1-205ENST00000508319 DDR2Q16832 855 aa13.95□□□□□ -0.18
HMGCS1-205ENST00000508319 DUOXA2Q1HG44 320 aa13.95□□□□□ -0.18
HMGCS1-205ENST00000508319 RESP18Q5W5W9 173 aa13.95□□□□□ -0.18
HMGCS1-205ENST00000508319 TXNDC8Q6A555 127 aa13.95□□□□□ -0.18
HMGCS1-205ENST00000508319 Q6ZS52 159 aa13.95□□□□□ -0.18
HMGCS1-205ENST00000508319 UNC13DQ70J99 1090 aa13.95□□□□□ -0.18
HMGCS1-205ENST00000508319 HSCBQ8IWL3 235 aa13.95□□□□□ -0.18
HMGCS1-205ENST00000508319 KIAA2013Q8IYS2 634 aa13.95□□□□□ -0.18
HMGCS1-205ENST00000508319 DCLK2Q8N568 766 aa13.95□□□□□ -0.18
HMGCS1-205ENST00000508319 CELF5Q8N6W0 485 aaKnown RBP13.95□□□□□ -0.18
HMGCS1-205ENST00000508319 MAB21L3Q8N8X9 362 aa13.95□□□□□ -0.18
HMGCS1-205ENST00000508319 RIN3Q8TB24 985 aa13.95□□□□□ -0.18
HMGCS1-205ENST00000508319 USP13Q92995 863 aaPredicted RBP13.95□□□□□ -0.18
HMGCS1-205ENST00000508319 TRMT2BQ96GJ1 504 aaKnown RBP13.95□□□□□ -0.18
HMGCS1-205ENST00000508319 FUBP3Q96I24 572 aaKnown RBP eCLIP13.95□□□□□ -0.18
HMGCS1-205ENST00000508319 HPDLQ96IR7 371 aa13.95□□□□□ -0.18
HMGCS1-205ENST00000508319 BLZF1Q9H2G9 400 aa13.95□□□□□ -0.18
HMGCS1-205ENST00000508319 RBM12Q9NTZ6 932 aaKnown RBP13.95□□□□□ -0.18
HMGCS1-205ENST00000508319 GTF3C4Q9UKN8 822 aa13.95□□□□□ -0.18
HMGCS1-205ENST00000508319 PCDHA7Q9UN72 937 aa13.95□□□□□ -0.18
HMGCS1-205ENST00000508319 MAGED2Q9UNF1 606 aaPredicted RBP13.95□□□□□ -0.18
HMGCS1-205ENST00000508319 SMG5Q9UPR3 1016 aaKnown RBP13.95□□□□□ -0.18
HMGCS1-205ENST00000508319 HELZP42694 1942 aaKnown RBP13.95□□□□□ -0.18
HMGCS1-205ENST00000508319 PDIA4P13667 645 aaKnown RBP13.94□□□□□ -0.18
HMGCS1-205ENST00000508319 LMO2P25791 158 aa13.94□□□□□ -0.18
HMGCS1-205ENST00000508319 DDX6P26196 483 aaKnown RBP eCLIP13.94□□□□□ -0.18
HMGCS1-205ENST00000508319 RPL10AP62906 217 aaKnown RBP13.94□□□□□ -0.18
HMGCS1-205ENST00000508319 LRRC32Q14392 662 aa13.94□□□□□ -0.18
HMGCS1-205ENST00000508319 PON2Q15165 354 aa13.94□□□□□ -0.18
HMGCS1-205ENST00000508319 BMT2Q1RMZ1 405 aa13.94□□□□□ -0.18
HMGCS1-205ENST00000508319 FAM171BQ6P995 826 aa13.94□□□□□ -0.18
HMGCS1-205ENST00000508319 DPH6Q7L8W6 267 aa13.94□□□□□ -0.18
HMGCS1-205ENST00000508319 NELFCDQ8IXH7 590 aa13.94□□□□□ -0.18
HMGCS1-205ENST00000508319 SPEM1Q8N4L4 309 aa13.94□□□□□ -0.18
HMGCS1-205ENST00000508319 CHFRQ96EP1 664 aa13.94□□□□□ -0.18
HMGCS1-205ENST00000508319 MYRFLQ96LU7 910 aa13.94□□□□□ -0.18
HMGCS1-205ENST00000508319 CGRRF1Q99675 332 aa13.94□□□□□ -0.18
HMGCS1-205ENST00000508319 FAM83CQ9BQN1 747 aa13.94□□□□□ -0.18
HMGCS1-205ENST00000508319 SYT15Q9BQS2 421 aa13.94□□□□□ -0.18
HMGCS1-205ENST00000508319 GZF1Q9H116 711 aaPredicted RBP13.94□□□□□ -0.18
HMGCS1-205ENST00000508319 KIAA1586Q9HCI6 787 aa13.94□□□□□ -0.18
HMGCS1-205ENST00000508319 HPS4Q9NQG7 708 aa13.94□□□□□ -0.18
HMGCS1-205ENST00000508319 NCOR2Q9Y618 2525 aa13.94□□□□□ -0.18
HMGCS1-205ENST00000508319 SOBPA7XYQ1 873 aa13.93□□□□□ -0.18
HMGCS1-205ENST00000508319 ATP2C2O75185 946 aa13.93□□□□□ -0.18
HMGCS1-205ENST00000508319 PAPSS2O95340 614 aaPredicted RBP13.93□□□□□ -0.18
HMGCS1-205ENST00000508319 DLATP10515 647 aaKnown RBP13.93□□□□□ -0.18
HMGCS1-205ENST00000508319 ME1P48163 572 aa13.93□□□□□ -0.18
HMGCS1-205ENST00000508319 CYP2J2P51589 502 aa13.93□□□□□ -0.18
HMGCS1-205ENST00000508319 PSMC1P62191 440 aaKnown RBP13.93□□□□□ -0.18
HMGCS1-205ENST00000508319 CYP24A1Q07973 514 aa13.93□□□□□ -0.18
HMGCS1-205ENST00000508319 CUL4BQ13620 913 aa13.93□□□□□ -0.18
HMGCS1-205ENST00000508319 PPP2R5DQ14738 602 aa13.93□□□□□ -0.18
HMGCS1-205ENST00000508319 PSMD6Q15008 389 aa13.93□□□□□ -0.18
HMGCS1-205ENST00000508319 ITPRIPL2Q3MIP1 535 aa13.93□□□□□ -0.18
HMGCS1-205ENST00000508319 DGKKQ5KSL6 1271 aa13.93□□□□□ -0.18
HMGCS1-205ENST00000508319 TRAPPC11Q7Z392 1133 aa13.93□□□□□ -0.18
HMGCS1-205ENST00000508319 MON1AQ86VX9 555 aa13.93□□□□□ -0.18
HMGCS1-205ENST00000508319 SPATA2LQ8IUW3 424 aaPredicted RBP13.93□□□□□ -0.18
HMGCS1-205ENST00000508319 MRPS31Q92665 395 aaKnown RBP13.93□□□□□ -0.18
HMGCS1-205ENST00000508319 MYLPFQ96A32 169 aa13.93□□□□□ -0.18
HMGCS1-205ENST00000508319 RMDN1Q96DB5 314 aa13.93□□□□□ -0.18
HMGCS1-205ENST00000508319 KIF9Q9HAQ2 790 aa13.93□□□□□ -0.18
HMGCS1-205ENST00000508319 CRTAC1Q9NQ79 661 aa13.93□□□□□ -0.18
HMGCS1-205ENST00000508319 TDP1Q9NUW8 608 aa13.93□□□□□ -0.18
HMGCS1-205ENST00000508319 C2orf42Q9NWW7 574 aa13.93□□□□□ -0.18
HMGCS1-205ENST00000508319 UXTQ9UBK9 157 aaPredicted RBP13.93□□□□□ -0.18
HMGCS1-205ENST00000508319 CDH9Q9ULB4 789 aa13.93□□□□□ -0.18
HMGCS1-205ENST00000508319 R3HCC1Q9Y3T6 440 aaKnown RBP13.93□□□□□ -0.18
HMGCS1-205ENST00000508319 NME7Q9Y5B8 376 aa13.93□□□□□ -0.18
HMGCS1-205ENST00000508319 OTOL1A6NHN0 477 aaPredicted RBP13.92□□□□□ -0.18
HMGCS1-205ENST00000508319 K7ESF4 209 aa13.92□□□□□ -0.18
HMGCS1-205ENST00000508319 CLIC2O15247 247 aa13.92□□□□□ -0.18
HMGCS1-205ENST00000508319 HSP90AA1P07900 732 aaKnown RBP13.92□□□□□ -0.18
HMGCS1-205ENST00000508319 WARSP23381 471 aaKnown RBP13.92□□□□□ -0.18
HMGCS1-205ENST00000508319 MAGEA11P43364 429 aa13.92□□□□□ -0.18
HMGCS1-205ENST00000508319 AFMP43652 599 aa13.92□□□□□ -0.18
HMGCS1-205ENST00000508319 CXCL12P48061 93 aa13.92□□□□□ -0.18
HMGCS1-205ENST00000508319 NRLP54845 237 aa13.92□□□□□ -0.18
HMGCS1-205ENST00000508319 SNRPFP62306 86 aaKnown RBP13.92□□□□□ -0.18
HMGCS1-205ENST00000508319 DNM1Q05193 864 aaKnown RBP13.92□□□□□ -0.18
HMGCS1-205ENST00000508319 ZNF268Q14587 947 aaPredicted RBP13.92□□□□□ -0.18
HMGCS1-205ENST00000508319 TRIM68Q6AZZ1 485 aa13.92□□□□□ -0.18
HMGCS1-205ENST00000508319 ATL3Q6DD88 541 aa13.92□□□□□ -0.18
HMGCS1-205ENST00000508319 C4orf50Q6ZRC1 276 aa13.92□□□□□ -0.18
HMGCS1-205ENST00000508319 HS2ST1Q7LGA3 356 aa13.92□□□□□ -0.18
HMGCS1-205ENST00000508319 C12orf56Q8IXR9 622 aa13.92□□□□□ -0.18
HMGCS1-205ENST00000508319 GRAMD1CQ8IYS0 662 aa13.92□□□□□ -0.18
HMGCS1-205ENST00000508319 XXYLT1Q8NBI6 393 aa13.92□□□□□ -0.18
HMGCS1-205ENST00000508319 RDH13Q8NBN7 331 aa13.92□□□□□ -0.18
HMGCS1-205ENST00000508319 SLC22A12Q96S37 553 aa13.92□□□□□ -0.18
HMGCS1-205ENST00000508319 EBF3Q9H4W6 596 aa13.92□□□□□ -0.18
HMGCS1-205ENST00000508319 SLC39A2Q9NP94 309 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms