RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 ALLCQ8N6M5 410 aa23.18■■□□□ 1.3
SPCS3-203ENST00000507678 SLC4A11Q8NBS3 891 aa23.18■■□□□ 1.3
SPCS3-203ENST00000507678 KCNH4Q9UQ05 1017 aa23.18■■□□□ 1.3
SPCS3-203ENST00000507678 PPME1Q9Y570 386 aa23.18■■□□□ 1.3
SPCS3-203ENST00000507678 GRAP2O75791 330 aa23.17■■□□□ 1.3
SPCS3-203ENST00000507678 LMNB2Q03252 620 aa23.17■■□□□ 1.3
SPCS3-203ENST00000507678 ARHGAP1Q07960 439 aa23.17■■□□□ 1.3
SPCS3-203ENST00000507678 TMEM62Q0P6H9 643 aa23.17■■□□□ 1.3
SPCS3-203ENST00000507678 CCDC13Q8IYE1 715 aa23.17■■□□□ 1.3
SPCS3-203ENST00000507678 CCDC197Q8NCU1 140 aa23.17■■□□□ 1.3
SPCS3-203ENST00000507678 PAIP2Q9BPZ3 127 aaKnown RBP23.17■■□□□ 1.3
SPCS3-203ENST00000507678 VPS37BQ9H9H4 285 aa23.17■■□□□ 1.3
SPCS3-203ENST00000507678 PRMT7Q9NVM4 692 aaPredicted RBP23.17■■□□□ 1.3
SPCS3-203ENST00000507678 STRIP2Q9ULQ0 834 aa23.17■■□□□ 1.3
SPCS3-203ENST00000507678 TCP11X1B4DZS4 312 aa23.17■■□□□ 1.3
SPCS3-203ENST00000507678 DNM1LO00429 736 aa23.17■■□□□ 1.3
SPCS3-203ENST00000507678 DNALI1O14645 258 aaPredicted RBP23.17■■□□□ 1.3
SPCS3-203ENST00000507678 MED7O43513 233 aa23.17■■□□□ 1.3
SPCS3-203ENST00000507678 MICAL2O94851 1124 aa23.17■■□□□ 1.3
SPCS3-203ENST00000507678 ARF4P18085 180 aaPredicted RBP23.17■■□□□ 1.3
SPCS3-203ENST00000507678 OTUD4Q01804 1114 aaKnown RBP23.17■■□□□ 1.3
SPCS3-203ENST00000507678 GAD2Q05329 585 aa23.17■■□□□ 1.3
SPCS3-203ENST00000507678 PTPN11Q06124 597 aaPredicted RBP23.17■■□□□ 1.3
SPCS3-203ENST00000507678 MPP2Q14168 576 aa23.17■■□□□ 1.3
SPCS3-203ENST00000507678 ANKMY2Q8IV38 441 aa23.17■■□□□ 1.3
SPCS3-203ENST00000507678 ZBED8Q8IZ13 594 aa23.17■■□□□ 1.3
SPCS3-203ENST00000507678 ACTL9Q8TC94 416 aa23.17■■□□□ 1.3
SPCS3-203ENST00000507678 CALN1Q9BXU9 219 aa23.17■■□□□ 1.3
SPCS3-203ENST00000507678 SAMD15Q9P1V8 674 aa23.17■■□□□ 1.3
SPCS3-203ENST00000507678 LRRC37A2A6NM11 1700 aa23.17■■□□□ 1.3
SPCS3-203ENST00000507678 SLC26A2P50443 739 aa23.16■■□□□ 1.3
SPCS3-203ENST00000507678 NRLP54845 237 aa23.16■■□□□ 1.3
SPCS3-203ENST00000507678 VCPP55072 806 aaKnown RBP23.16■■□□□ 1.3
SPCS3-203ENST00000507678 GDF10P55107 478 aa23.16■■□□□ 1.3
SPCS3-203ENST00000507678 CDO1Q16878 200 aa23.16■■□□□ 1.3
SPCS3-203ENST00000507678 SYCP2LQ5T4T6 812 aa23.16■■□□□ 1.3
SPCS3-203ENST00000507678 FASTKD5Q7L8L6 764 aaKnown RBP23.16■■□□□ 1.3
SPCS3-203ENST00000507678 YTHDF3Q7Z739 585 aaKnown RBP23.16■■□□□ 1.3
SPCS3-203ENST00000507678 ZCCHC9Q8N567 271 aaKnown RBP23.16■■□□□ 1.3
SPCS3-203ENST00000507678 MROH8Q9H579 483 aa23.16■■□□□ 1.3
SPCS3-203ENST00000507678 PDZD7Q9H5P4 517 aa23.16■■□□□ 1.3
SPCS3-203ENST00000507678 EXOC1LA0A1B0GW35 172 aa23.16■■□□□ 1.3
SPCS3-203ENST00000507678 IL18RAPO95256 599 aa23.16■■□□□ 1.3
SPCS3-203ENST00000507678 CDH5P33151 784 aaPredicted RBP23.16■■□□□ 1.3
SPCS3-203ENST00000507678 RAB6CQ53S08 254 aa23.16■■□□□ 1.3
SPCS3-203ENST00000507678 SH3PXD2AQ5TCZ1 1133 aa23.16■■□□□ 1.3
SPCS3-203ENST00000507678 C9orf131Q5VYM1 1079 aa23.16■■□□□ 1.3
SPCS3-203ENST00000507678 ARMC9Q7Z3E5 817 aa23.16■■□□□ 1.3
SPCS3-203ENST00000507678 XYLT1Q86Y38 959 aa23.16■■□□□ 1.3
SPCS3-203ENST00000507678 HPDLQ96IR7 371 aa23.16■■□□□ 1.3
SPCS3-203ENST00000507678 RAB6CQ9H0N0 254 aa23.16■■□□□ 1.3
SPCS3-203ENST00000507678 FGFR1OP2Q9NVK5 253 aa23.16■■□□□ 1.3
SPCS3-203ENST00000507678 DDX56Q9NY93 547 aaKnown RBP23.16■■□□□ 1.3
SPCS3-203ENST00000507678 TPX2Q9ULW0 747 aaKnown RBP23.16■■□□□ 1.3
SPCS3-203ENST00000507678 ATXN2Q99700 1313 aaKnown RBP23.16■■□□□ 1.3
SPCS3-203ENST00000507678 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.16■■□□□ 1.3
SPCS3-203ENST00000507678 SIGLEC16A6NMB1 481 aa23.16■■□□□ 1.3
SPCS3-203ENST00000507678 HGSO14964 777 aaPredicted RBP23.16■■□□□ 1.3
SPCS3-203ENST00000507678 ADORA2AP29274 412 aa23.16■■□□□ 1.3
SPCS3-203ENST00000507678 SLC25A11Q02978 314 aaKnown RBP23.16■■□□□ 1.3
SPCS3-203ENST00000507678 TAP1Q03518 808 aa23.16■■□□□ 1.3
SPCS3-203ENST00000507678 SLC10A6Q3KNW5 377 aa23.16■■□□□ 1.3
SPCS3-203ENST00000507678 FAM102AQ5T9C2 384 aaPredicted RBP23.16■■□□□ 1.3
SPCS3-203ENST00000507678 LRRC38Q5VT99 294 aa23.16■■□□□ 1.3
SPCS3-203ENST00000507678 TMEM176AQ96HP8 235 aa23.16■■□□□ 1.3
SPCS3-203ENST00000507678 ATP5DP30049 168 aa23.15■■□□□ 1.3
SPCS3-203ENST00000507678 CCDC125Q86Z20 511 aa23.15■■□□□ 1.3
SPCS3-203ENST00000507678 KCTD6Q8NC69 237 aa23.15■■□□□ 1.3
SPCS3-203ENST00000507678 CCDC77Q9BR77 488 aa23.15■■□□□ 1.3
SPCS3-203ENST00000507678 BCO2Q9BYV7 579 aa23.15■■□□□ 1.3
SPCS3-203ENST00000507678 SPAG7O75391 227 aa23.15■■□□□ 1.3
SPCS3-203ENST00000507678 OASLQ15646 514 aaKnown RBP23.15■■□□□ 1.3
SPCS3-203ENST00000507678 MAP1SQ66K74 1059 aaPredicted RBP23.15■■□□□ 1.3
SPCS3-203ENST00000507678 NUGGCQ68CJ6 796 aa23.15■■□□□ 1.3
SPCS3-203ENST00000507678 RFX6Q8HWS3 928 aa23.15■■□□□ 1.3
SPCS3-203ENST00000507678 C12orf29Q8N999 325 aa23.15■■□□□ 1.3
SPCS3-203ENST00000507678 CXCL16Q9H2A7 254 aa23.15■■□□□ 1.3
SPCS3-203ENST00000507678 ASB14A6NK59 587 aa23.14■■□□□ 1.29
SPCS3-203ENST00000507678 RASA4BC9J798 803 aa23.14■■□□□ 1.29
SPCS3-203ENST00000507678 ASAP2O43150 1006 aa23.14■■□□□ 1.29
SPCS3-203ENST00000507678 RASA4O43374 803 aa23.14■■□□□ 1.29
SPCS3-203ENST00000507678 ACTN3Q08043 901 aaPredicted RBP23.14■■□□□ 1.29
SPCS3-203ENST00000507678 AMHR2Q16671 573 aa23.14■■□□□ 1.29
SPCS3-203ENST00000507678 HADHQ16836 314 aaKnown RBP23.14■■□□□ 1.29
SPCS3-203ENST00000507678 ANKS4BQ8N8V4 417 aa23.14■■□□□ 1.29
SPCS3-203ENST00000507678 CDH16O75309 829 aa23.14■■□□□ 1.29
SPCS3-203ENST00000507678 FSBPO95073 299 aa23.14■■□□□ 1.29
SPCS3-203ENST00000507678 RGS7P49802 495 aa23.14■■□□□ 1.29
SPCS3-203ENST00000507678 PDIA2Q13087 525 aaKnown RBP23.14■■□□□ 1.29
SPCS3-203ENST00000507678 TMEM132DQ14C87 1099 aa23.14■■□□□ 1.29
SPCS3-203ENST00000507678 ANKRD20A8PQ5CZ79 823 aa23.14■■□□□ 1.29
SPCS3-203ENST00000507678 PIWIL1Q96J94 861 aaKnown RBP23.14■■□□□ 1.29
SPCS3-203ENST00000507678 ADPGKQ9BRR6 497 aa23.14■■□□□ 1.29
SPCS3-203ENST00000507678 GGA2Q9UJY4 613 aa23.14■■□□□ 1.29
SPCS3-203ENST00000507678 C3orf70A6NLC5 250 aaPredicted RBP23.13■■□□□ 1.29
SPCS3-203ENST00000507678 CILPO75339 1184 aa23.13■■□□□ 1.29
SPCS3-203ENST00000507678 NDST1P52848 882 aa23.13■■□□□ 1.29
SPCS3-203ENST00000507678 ILDR2Q71H61 639 aa23.13■■□□□ 1.29
SPCS3-203ENST00000507678 KIF9Q9HAQ2 790 aa23.13■■□□□ 1.29
SPCS3-203ENST00000507678 KDELR1P24390 212 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms