RNA–Protein interactions for RNA: ENST00000507653.1

AC008539.1-201, humanhuman

TSL 3 BASIC

Gene AC008539.1, Length 482 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008539.1-201ENST00000507653 RPL17P18621 184 aaKnown RBP3.88□□□□□ -1.79
AC008539.1-201ENST00000507653 HDCP19113 662 aa3.88□□□□□ -1.79
AC008539.1-201ENST00000507653 CACNB3P54284 484 aa3.88□□□□□ -1.79
AC008539.1-201ENST00000507653 IQCB1Q15051 598 aa3.88□□□□□ -1.79
AC008539.1-201ENST00000507653 EZH2Q15910 746 aaKnown RBP3.88□□□□□ -1.79
AC008539.1-201ENST00000507653 ICE2Q659A1 982 aa3.88□□□□□ -1.79
AC008539.1-201ENST00000507653 SUMO4Q6EEV6 95 aa3.88□□□□□ -1.79
AC008539.1-201ENST00000507653 CYB5RLQ6IPT4 315 aa3.88□□□□□ -1.79
AC008539.1-201ENST00000507653 RAVER1Q8IY67 606 aaKnown RBP3.88□□□□□ -1.79
AC008539.1-201ENST00000507653 SH2D3CQ8N5H7 860 aa3.88□□□□□ -1.79
AC008539.1-201ENST00000507653 ZBTB34Q8NCN2 500 aa3.88□□□□□ -1.79
AC008539.1-201ENST00000507653 B3GALNT2Q8NCR0 500 aa3.88□□□□□ -1.79
AC008539.1-201ENST00000507653 HASPINQ8TF76 798 aa3.88□□□□□ -1.79
AC008539.1-201ENST00000507653 SARAFQ96BY9 339 aa3.88□□□□□ -1.79
AC008539.1-201ENST00000507653 MESP1Q9BRJ9 268 aa3.88□□□□□ -1.79
AC008539.1-201ENST00000507653 PTDSS2Q9BVG9 487 aa3.88□□□□□ -1.79
AC008539.1-201ENST00000507653 ATP6V0A4Q9HBG4 840 aa3.88□□□□□ -1.79
AC008539.1-201ENST00000507653 SLAMF7Q9NQ25 335 aa3.88□□□□□ -1.79
AC008539.1-201ENST00000507653 PRDM11Q9NQV5 511 aa3.88□□□□□ -1.79
AC008539.1-201ENST00000507653 EHD3Q9NZN3 535 aa3.88□□□□□ -1.79
AC008539.1-201ENST00000507653 ARPP21Q9UBL0 812 aaPredicted RBP3.88□□□□□ -1.79
AC008539.1-201ENST00000507653 SHOC2Q9UQ13 582 aa3.88□□□□□ -1.79
AC008539.1-201ENST00000507653 ADGRA2Q96PE1 1338 aa3.88□□□□□ -1.79
AC008539.1-201ENST00000507653 A0A1W2PPL8 197 aa3.87□□□□□ -1.79
AC008539.1-201ENST00000507653 M0QYG6 137 aa3.87□□□□□ -1.79
AC008539.1-201ENST00000507653 TLR5O60602 858 aa3.87□□□□□ -1.79
AC008539.1-201ENST00000507653 TJP3O95049 919 aa3.87□□□□□ -1.79
AC008539.1-201ENST00000507653 UNC5CO95185 931 aa3.87□□□□□ -1.79
AC008539.1-201ENST00000507653 GRPP07492 148 aa3.87□□□□□ -1.79
AC008539.1-201ENST00000507653 NPR1P16066 1061 aa3.87□□□□□ -1.79
AC008539.1-201ENST00000507653 CD6P30203 668 aa3.87□□□□□ -1.79
AC008539.1-201ENST00000507653 SLC11A2P49281 568 aa3.87□□□□□ -1.79
AC008539.1-201ENST00000507653 HNRNPMP52272 730 aaKnown RBP eCLIP3.87□□□□□ -1.79
AC008539.1-201ENST00000507653 MAPK10P53779 464 aa3.87□□□□□ -1.79
AC008539.1-201ENST00000507653 FOXF2Q12947 444 aa3.87□□□□□ -1.79
AC008539.1-201ENST00000507653 BMPR2Q13873 1038 aa3.87□□□□□ -1.79
AC008539.1-201ENST00000507653 MLC1Q15049 377 aa3.87□□□□□ -1.79
AC008539.1-201ENST00000507653 SRSF7Q16629 238 aaKnown RBP eCLIP3.87□□□□□ -1.79
AC008539.1-201ENST00000507653 GFOD2Q3B7J2 385 aa3.87□□□□□ -1.79
AC008539.1-201ENST00000507653 RBM20Q5T481 1227 aaKnown RBP3.87□□□□□ -1.79
AC008539.1-201ENST00000507653 ZNF618Q5T7W0 954 aa3.87□□□□□ -1.79
AC008539.1-201ENST00000507653 ZNF783Q6ZMS7 281 aa3.87□□□□□ -1.79
AC008539.1-201ENST00000507653 MYO1HQ8N1T3 1032 aa3.87□□□□□ -1.79
AC008539.1-201ENST00000507653 NSUN7Q8NE18 718 aaKnown RBP3.87□□□□□ -1.79
AC008539.1-201ENST00000507653 FAM46DQ8NEK8 389 aa3.87□□□□□ -1.79
AC008539.1-201ENST00000507653 TOR1AIP2Q8NFQ8 470 aa3.87□□□□□ -1.79
AC008539.1-201ENST00000507653 OR6B3Q8NGW1 331 aa3.87□□□□□ -1.79
AC008539.1-201ENST00000507653 IL31RAQ8NI17 732 aa3.87□□□□□ -1.79
AC008539.1-201ENST00000507653 PPP1R35Q8TAP8 253 aa3.87□□□□□ -1.79
AC008539.1-201ENST00000507653 ATRIPQ8WXE1 791 aa3.87□□□□□ -1.79
AC008539.1-201ENST00000507653 RFKQ969G6 155 aa3.87□□□□□ -1.79
AC008539.1-201ENST00000507653 NMD3Q96D46 503 aaKnown RBP3.87□□□□□ -1.79
AC008539.1-201ENST00000507653 MSLNLQ96KJ4 702 aa3.87□□□□□ -1.79
AC008539.1-201ENST00000507653 B3GNT5Q9BYG0 378 aa3.87□□□□□ -1.79
AC008539.1-201ENST00000507653 ZNF518BQ9C0D4 1074 aa3.87□□□□□ -1.79
AC008539.1-201ENST00000507653 XPNPEP3Q9NQH7 507 aa3.87□□□□□ -1.79
AC008539.1-201ENST00000507653 SERTAD4Q9NUC0 356 aa3.87□□□□□ -1.79
AC008539.1-201ENST00000507653 ASB6Q9NWX5 421 aa3.87□□□□□ -1.79
AC008539.1-201ENST00000507653 XPR1Q9UBH6 696 aa3.87□□□□□ -1.79
AC008539.1-201ENST00000507653 PCDHA6Q9UN73 950 aa3.87□□□□□ -1.79
AC008539.1-201ENST00000507653 DNAJC9-AS1A6NH13 148 aa3.86□□□□□ -1.79
AC008539.1-201ENST00000507653 LRRC3CA6NJW4 275 aa3.86□□□□□ -1.79
AC008539.1-201ENST00000507653 ADM5C9JUS6 153 aa3.86□□□□□ -1.79
AC008539.1-201ENST00000507653 PRPF3O43395 683 aaKnown RBP3.86□□□□□ -1.79
AC008539.1-201ENST00000507653 C1QL1O75973 258 aa3.86□□□□□ -1.79
AC008539.1-201ENST00000507653 URI1O94763 535 aaPredicted RBP3.86□□□□□ -1.79
AC008539.1-201ENST00000507653 PRKCGP05129 697 aa3.86□□□□□ -1.79
AC008539.1-201ENST00000507653 ITPKBP27987 946 aa3.86□□□□□ -1.79
AC008539.1-201ENST00000507653 PHKA1P46020 1223 aa3.86□□□□□ -1.79
AC008539.1-201ENST00000507653 KCNJ5P48544 419 aa3.86□□□□□ -1.79
AC008539.1-201ENST00000507653 PXNP49023 591 aaPredicted RBP3.86□□□□□ -1.79
AC008539.1-201ENST00000507653 ZNF81P51508 661 aa3.86□□□□□ -1.79
AC008539.1-201ENST00000507653 ZNF134P52741 427 aa3.86□□□□□ -1.79
AC008539.1-201ENST00000507653 SATB1Q01826 763 aa3.86□□□□□ -1.79
AC008539.1-201ENST00000507653 SLC10A2Q12908 348 aaPredicted RBP3.86□□□□□ -1.79
AC008539.1-201ENST00000507653 BOP1Q14137 746 aaKnown RBP3.86□□□□□ -1.79
AC008539.1-201ENST00000507653 POLD3Q15054 466 aaPredicted RBP3.86□□□□□ -1.79
AC008539.1-201ENST00000507653 LRRC41Q15345 812 aa3.86□□□□□ -1.79
AC008539.1-201ENST00000507653 PLAC9Q5JTB6 97 aa3.86□□□□□ -1.79
AC008539.1-201ENST00000507653 TSTD2Q5T7W7 516 aa3.86□□□□□ -1.79
AC008539.1-201ENST00000507653 LMBRD2Q68DH5 695 aaPredicted RBP3.86□□□□□ -1.79
AC008539.1-201ENST00000507653 MTHFD1LQ6UB35 978 aa3.86□□□□□ -1.79
AC008539.1-201ENST00000507653 ZNF788Q6ZQV5 615 aa3.86□□□□□ -1.79
AC008539.1-201ENST00000507653 WDR53Q7Z5U6 358 aaPredicted RBP3.86□□□□□ -1.79
AC008539.1-201ENST00000507653 PEG10Q86TG7 708 aaKnown RBP3.86□□□□□ -1.79
AC008539.1-201ENST00000507653 RSPRY1Q96DX4 576 aa3.86□□□□□ -1.79
AC008539.1-201ENST00000507653 SLC46A1Q96NT5 459 aa3.86□□□□□ -1.79
AC008539.1-201ENST00000507653 HAPLN3Q96S86 360 aa3.86□□□□□ -1.79
AC008539.1-201ENST00000507653 C22orf23Q9BZE7 217 aa3.86□□□□□ -1.79
AC008539.1-201ENST00000507653 SEMA4CQ9C0C4 833 aa3.86□□□□□ -1.79
AC008539.1-201ENST00000507653 SMOC2Q9H3U7 446 aa3.86□□□□□ -1.79
AC008539.1-201ENST00000507653 ZMAT3Q9HA38 289 aaKnown RBP3.86□□□□□ -1.79
AC008539.1-201ENST00000507653 SMURF2Q9HAU4 748 aa3.86□□□□□ -1.79
AC008539.1-201ENST00000507653 MRPS18AQ9NVS2 196 aaKnown RBP3.86□□□□□ -1.79
AC008539.1-201ENST00000507653 RNF7Q9UBF6 113 aa3.86□□□□□ -1.79
AC008539.1-201ENST00000507653 TMX2Q9Y320 296 aa3.86□□□□□ -1.79
AC008539.1-201ENST00000507653 SETD1BQ9UPS6 1966 aaKnown RBP3.85□□□□□ -1.79
AC008539.1-201ENST00000507653 TRIM43BA6NCK2 446 aa3.85□□□□□ -1.79
AC008539.1-201ENST00000507653 MBD3L4A6NDZ8 208 aaPredicted RBP3.85□□□□□ -1.79
AC008539.1-201ENST00000507653 MBD3L3A6NE82 208 aaPredicted RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms