RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 AMPD2Q01433 879 aa6.23□□□□□ -1.41
GYPB-208ENST00000507009 MCL1Q07820 350 aa6.23□□□□□ -1.41
GYPB-208ENST00000507009 MYBPC2Q14324 1141 aa6.23□□□□□ -1.41
GYPB-208ENST00000507009 ACAP1Q15027 740 aa6.23□□□□□ -1.41
GYPB-208ENST00000507009 KARSQ15046 597 aaKnown RBP6.23□□□□□ -1.41
GYPB-208ENST00000507009 ENOX2Q16206 610 aaKnown RBP6.23□□□□□ -1.41
GYPB-208ENST00000507009 C2orf27AQ580R0 203 aa6.23□□□□□ -1.41
GYPB-208ENST00000507009 ANO7Q6IWH7 933 aa6.23□□□□□ -1.41
GYPB-208ENST00000507009 C1orf186Q6ZWK4 172 aa6.23□□□□□ -1.41
GYPB-208ENST00000507009 CMTM8Q8IZV2 173 aa6.23□□□□□ -1.41
GYPB-208ENST00000507009 THEM5Q8N1Q8 247 aa6.23□□□□□ -1.41
GYPB-208ENST00000507009 CPA6Q8N4T0 437 aa6.23□□□□□ -1.41
GYPB-208ENST00000507009 CCDC33Q8N5R6 958 aa6.23□□□□□ -1.41
GYPB-208ENST00000507009 FAM184AQ8NB25 1140 aa6.23□□□□□ -1.41
GYPB-208ENST00000507009 TMEM161BQ8NDZ6 487 aa6.23□□□□□ -1.41
GYPB-208ENST00000507009 TSTD1Q8NFU3 115 aa6.23□□□□□ -1.41
GYPB-208ENST00000507009 RIN3Q8TB24 985 aa6.23□□□□□ -1.41
GYPB-208ENST00000507009 MRPS31Q92665 395 aaKnown RBP6.23□□□□□ -1.41
GYPB-208ENST00000507009 USP13Q92995 863 aaPredicted RBP6.23□□□□□ -1.41
GYPB-208ENST00000507009 ZNF775Q96BV0 537 aaPredicted RBP6.23□□□□□ -1.41
GYPB-208ENST00000507009 CDK5RAP3Q96JB5 506 aa6.23□□□□□ -1.41
GYPB-208ENST00000507009 ZC3H10Q96K80 434 aaKnown RBP6.23□□□□□ -1.41
GYPB-208ENST00000507009 P2RY13Q9BPV8 354 aa6.23□□□□□ -1.41
GYPB-208ENST00000507009 PI4K2AQ9BTU6 479 aa6.23□□□□□ -1.41
GYPB-208ENST00000507009 OXCT2Q9BYC2 517 aaPredicted RBP6.23□□□□□ -1.41
GYPB-208ENST00000507009 RAB34Q9BZG1 259 aa6.23□□□□□ -1.41
GYPB-208ENST00000507009 HAPLN2Q9GZV7 340 aa6.23□□□□□ -1.41
GYPB-208ENST00000507009 PLEKHA5Q9HAU0 1116 aa6.23□□□□□ -1.41
GYPB-208ENST00000507009 TMEM9BQ9NQ34 198 aa6.23□□□□□ -1.41
GYPB-208ENST00000507009 TDP1Q9NUW8 608 aa6.23□□□□□ -1.41
GYPB-208ENST00000507009 DUS2Q9NX74 493 aaKnown RBP6.23□□□□□ -1.41
GYPB-208ENST00000507009 FCF1Q9Y324 198 aaKnown RBP6.23□□□□□ -1.41
GYPB-208ENST00000507009 WNT6Q9Y6F9 365 aa6.23□□□□□ -1.41
GYPB-208ENST00000507009 MYO16Q9Y6X6 1858 aa6.23□□□□□ -1.41
GYPB-208ENST00000507009 LAMA1P25391 3075 aa6.23□□□□□ -1.41
GYPB-208ENST00000507009 ATXN2Q99700 1313 aaKnown RBP6.23□□□□□ -1.41
GYPB-208ENST00000507009 OBSL1O75147 1896 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 NUP205Q92621 2012 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 CCDC163A0A0D9SF12 145 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 SPAARA0A1B0GVQ0 90 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 ANTXRLA6NF34 631 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 K7ENM7 598 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 TRDMT1O14717 391 aaKnown RBP6.22□□□□□ -1.41
GYPB-208ENST00000507009 SCAMP3O14828 347 aaKnown RBP6.22□□□□□ -1.41
GYPB-208ENST00000507009 HNRNPDLO14979 420 aaKnown RBP6.22□□□□□ -1.41
GYPB-208ENST00000507009 OGTO15294 1046 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 PRPF40AO75400 957 aaKnown RBP6.22□□□□□ -1.41
GYPB-208ENST00000507009 AKAP3O75969 853 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 CKMP06732 381 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 NFICP08651 508 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 HAPLN1P10915 354 aaPredicted RBP6.22□□□□□ -1.41
GYPB-208ENST00000507009 PLS3P13797 630 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 TYMPP19971 482 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 DRD1P21728 446 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 GJA4P35212 333 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 ACOT2P49753 483 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 NLRP12P59046 1061 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 LILRA4P59901 499 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 IRX4P78413 519 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 RING1Q06587 406 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 ST3GAL1Q11201 340 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 MTF1Q14872 753 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 TMEM132DQ14C87 1099 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 PDGFRLQ15198 375 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 DDR2Q16832 855 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 USP39Q53GS9 565 aaKnown RBP6.22□□□□□ -1.41
GYPB-208ENST00000507009 C9orf57Q5W0N0 161 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 WSCD1Q658N2 575 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 ZPBP2Q6X784 338 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 LRRTM3Q86VH5 581 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 SCN4BQ8IWT1 228 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 TMEFF1Q8IYR6 380 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 PGBD3Q8N328 593 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 CAMKK1Q8N5S9 505 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 NOC3LQ8WTT2 800 aaKnown RBP6.22□□□□□ -1.41
GYPB-208ENST00000507009 RLN3Q8WXF3 142 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 CD101Q93033 1021 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 EXOC4Q96A65 974 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 ACDQ96AP0 544 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 ERLEC1Q96DZ1 483 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 CYP2S1Q96SQ9 504 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 FAM83CQ9BQN1 747 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 MSTO1Q9BUK6 570 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 GTPBP2Q9BX10 602 aaKnown RBP6.22□□□□□ -1.41
GYPB-208ENST00000507009 ZCWPW1Q9H0M4 648 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 FOXP1Q9H334 677 aaPredicted RBP6.22□□□□□ -1.41
GYPB-208ENST00000507009 FSCN3Q9NQT6 498 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 PRDM9Q9NQV7 894 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 PCDHB6Q9Y5E3 794 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 PCDHB5Q9Y5E4 795 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 DENND4CQ5VZ89 1909 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 KIAA1549LQ6ZVL6 1849 aa6.22□□□□□ -1.41
GYPB-208ENST00000507009 AKAP13Q12802 2813 aa6.21□□□□□ -1.41
GYPB-208ENST00000507009 ADAMTS9Q9P2N4 1935 aa6.21□□□□□ -1.41
GYPB-208ENST00000507009 TRAV19A0A0A6YYK7 116 aa6.21□□□□□ -1.42
GYPB-208ENST00000507009 TISP43B9A030 160 aa6.21□□□□□ -1.42
GYPB-208ENST00000507009 EPB41L2O43491 1005 aaKnown RBP6.21□□□□□ -1.42
GYPB-208ENST00000507009 F11P03951 625 aa6.21□□□□□ -1.42
GYPB-208ENST00000507009 CFIP05156 583 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms