RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 SNCAIPQ9Y6H5 919 aa17.92■□□□□ 0.46
SQSTM1-211ENST00000506690 A6NJR5 290 aa17.92■□□□□ 0.46
SQSTM1-211ENST00000506690 ATP9BO43861 1147 aa17.92■□□□□ 0.46
SQSTM1-211ENST00000506690 ASLP04424 464 aa17.92■□□□□ 0.46
SQSTM1-211ENST00000506690 HARSP12081 509 aaKnown RBP17.92■□□□□ 0.46
SQSTM1-211ENST00000506690 VAV1P15498 845 aa17.92■□□□□ 0.46
SQSTM1-211ENST00000506690 GAD2Q05329 585 aa17.92■□□□□ 0.46
SQSTM1-211ENST00000506690 SLC18A2Q05940 514 aa17.92■□□□□ 0.46
SQSTM1-211ENST00000506690 FNBP1LQ5T0N5 605 aa17.92■□□□□ 0.46
SQSTM1-211ENST00000506690 C1orf146Q5VVC0 180 aa17.92■□□□□ 0.46
SQSTM1-211ENST00000506690 AAGABQ6PD74 315 aa17.92■□□□□ 0.46
SQSTM1-211ENST00000506690 FAM172AQ8WUF8 416 aa17.92■□□□□ 0.46
SQSTM1-211ENST00000506690 TTC17Q96AE7 1141 aa17.92■□□□□ 0.46
SQSTM1-211ENST00000506690 MTBPQ96DY7 904 aa17.92■□□□□ 0.46
SQSTM1-211ENST00000506690 CYTH2Q99418 400 aa17.92■□□□□ 0.46
SQSTM1-211ENST00000506690 MRPL47Q9HD33 250 aaKnown RBP17.92■□□□□ 0.46
SQSTM1-211ENST00000506690 TOPORSQ9NS56 1045 aaPredicted RBP17.92■□□□□ 0.46
SQSTM1-211ENST00000506690 TAGLN3Q9UI15 199 aa17.92■□□□□ 0.46
SQSTM1-211ENST00000506690 G3BP2Q9UN86 482 aaKnown RBP17.92■□□□□ 0.46
SQSTM1-211ENST00000506690 SMIM31A0A1B0GVY4 71 aa17.91■□□□□ 0.46
SQSTM1-211ENST00000506690 E7ESA3 106 aa17.91■□□□□ 0.46
SQSTM1-211ENST00000506690 ZSCAN9O15535 394 aaPredicted RBP17.91■□□□□ 0.46
SQSTM1-211ENST00000506690 MT-ND3P03897 115 aa17.91■□□□□ 0.46
SQSTM1-211ENST00000506690 DSG3P32926 999 aa17.91■□□□□ 0.46
SQSTM1-211ENST00000506690 CCNFP41002 786 aa17.91■□□□□ 0.46
SQSTM1-211ENST00000506690 ERFP50548 548 aa17.91■□□□□ 0.46
SQSTM1-211ENST00000506690 LIN9Q5TKA1 542 aa17.91■□□□□ 0.46
SQSTM1-211ENST00000506690 MFSD7Q6UXD7 560 aa17.91■□□□□ 0.46
SQSTM1-211ENST00000506690 PCGF5Q86SE9 256 aa17.91■□□□□ 0.46
SQSTM1-211ENST00000506690 NCAPG2Q86XI2 1143 aa17.91■□□□□ 0.46
SQSTM1-211ENST00000506690 C1orf21Q9H246 121 aa17.91■□□□□ 0.46
SQSTM1-211ENST00000506690 ETNK2Q9NVF9 386 aa17.91■□□□□ 0.46
SQSTM1-211ENST00000506690 BRWD3Q6RI45 1802 aa17.91■□□□□ 0.46
SQSTM1-211ENST00000506690 SPECC1L-ADORA2AF8WAN1 911 aa17.91■□□□□ 0.46
SQSTM1-211ENST00000506690 ATF7P17544 494 aaPredicted RBP17.91■□□□□ 0.46
SQSTM1-211ENST00000506690 MED21Q13503 144 aa17.91■□□□□ 0.46
SQSTM1-211ENST00000506690 PLEKHA7Q6IQ23 1121 aa17.91■□□□□ 0.46
SQSTM1-211ENST00000506690 RASSF3Q86WH2 238 aa17.91■□□□□ 0.46
SQSTM1-211ENST00000506690 GMCL1Q96IK5 515 aa17.91■□□□□ 0.46
SQSTM1-211ENST00000506690 SERAC1Q96JX3 654 aa17.91■□□□□ 0.46
SQSTM1-211ENST00000506690 ZNF577Q9BSK1 485 aa17.91■□□□□ 0.46
SQSTM1-211ENST00000506690 IPO5O00410 1097 aaKnown RBP17.9■□□□□ 0.46
SQSTM1-211ENST00000506690 ASPHQ12797 758 aa17.9■□□□□ 0.46
SQSTM1-211ENST00000506690 MAP7Q14244 749 aa17.9■□□□□ 0.46
SQSTM1-211ENST00000506690 CEP55Q53EZ4 464 aa17.9■□□□□ 0.46
SQSTM1-211ENST00000506690 CCDC174Q6PII3 467 aa17.9■□□□□ 0.46
SQSTM1-211ENST00000506690 SV2AQ7L0J3 742 aa17.9■□□□□ 0.46
SQSTM1-211ENST00000506690 FBXO36Q8NEA4 188 aa17.9■□□□□ 0.46
SQSTM1-211ENST00000506690 C11orf70Q9BRQ4 267 aa17.9■□□□□ 0.46
SQSTM1-211ENST00000506690 TMEM121Q9BTD3 319 aa17.9■□□□□ 0.46
SQSTM1-211ENST00000506690 S100A14Q9HCY8 104 aa17.9■□□□□ 0.46
SQSTM1-211ENST00000506690 GMEB1Q9Y692 573 aa17.9■□□□□ 0.46
SQSTM1-211ENST00000506690 DCAF8L1A6NGE4 600 aa17.9■□□□□ 0.46
SQSTM1-211ENST00000506690 TLR3O15455 904 aaKnown RBP17.9■□□□□ 0.46
SQSTM1-211ENST00000506690 OPHN1O60890 802 aa17.9■□□□□ 0.46
SQSTM1-211ENST00000506690 ARP10275 920 aa17.9■□□□□ 0.46
SQSTM1-211ENST00000506690 UQCRBP14927 111 aa17.9■□□□□ 0.46
SQSTM1-211ENST00000506690 TCF4P15884 667 aa17.9■□□□□ 0.46
SQSTM1-211ENST00000506690 STIP1P31948 543 aaKnown RBP17.9■□□□□ 0.46
SQSTM1-211ENST00000506690 GTF2H1P32780 548 aa17.9■□□□□ 0.46
SQSTM1-211ENST00000506690 GTF2IP78347 998 aa17.9■□□□□ 0.46
SQSTM1-211ENST00000506690 KDSRQ06136 332 aa17.9■□□□□ 0.46
SQSTM1-211ENST00000506690 IKQ13123 557 aaPredicted RBP17.9■□□□□ 0.46
SQSTM1-211ENST00000506690 ANKRD22Q5VYY1 191 aa17.9■□□□□ 0.46
SQSTM1-211ENST00000506690 DHDDSQ86SQ9 333 aa17.9■□□□□ 0.46
SQSTM1-211ENST00000506690 PPIL6Q8IXY8 311 aa17.9■□□□□ 0.46
SQSTM1-211ENST00000506690 GMCL1P1Q8NEA9 526 aa17.9■□□□□ 0.46
SQSTM1-211ENST00000506690 TMC2Q8TDI7 906 aa17.9■□□□□ 0.46
SQSTM1-211ENST00000506690 CPT1BQ92523 772 aa17.9■□□□□ 0.46
SQSTM1-211ENST00000506690 VCPIP1Q96JH7 1222 aa17.9■□□□□ 0.46
SQSTM1-211ENST00000506690 CCDC106Q9BWC9 280 aa17.9■□□□□ 0.46
SQSTM1-211ENST00000506690 NDUFA13Q9P0J0 144 aa17.9■□□□□ 0.46
SQSTM1-211ENST00000506690 HSFX1Q9UBD0 423 aa17.9■□□□□ 0.46
SQSTM1-211ENST00000506690 PPARGC1AQ9UBK2 798 aaKnown RBP17.9■□□□□ 0.46
SQSTM1-211ENST00000506690 PPME1Q9Y570 386 aa17.9■□□□□ 0.46
SQSTM1-211ENST00000506690 QSER1Q2KHR3 1735 aa17.9■□□□□ 0.46
SQSTM1-211ENST00000506690 SIPA1L1O43166 1804 aa17.89■□□□□ 0.45
SQSTM1-211ENST00000506690 IQANK1A0A1B0GTG1 560 aa17.89■□□□□ 0.45
SQSTM1-211ENST00000506690 SGK1O00141 431 aa17.89■□□□□ 0.45
SQSTM1-211ENST00000506690 ZNF862O60290 1169 aa17.89■□□□□ 0.45
SQSTM1-211ENST00000506690 IFNB1P01574 187 aa17.89■□□□□ 0.45
SQSTM1-211ENST00000506690 USP46P62068 366 aa17.89■□□□□ 0.45
SQSTM1-211ENST00000506690 MSLNQ13421 630 aaPredicted RBP17.89■□□□□ 0.45
SQSTM1-211ENST00000506690 TTLL12Q14166 644 aaPredicted RBP17.89■□□□□ 0.45
SQSTM1-211ENST00000506690 SFT2D3Q587I9 215 aa17.89■□□□□ 0.45
SQSTM1-211ENST00000506690 SLC27A3Q5K4L6 730 aa17.89■□□□□ 0.45
SQSTM1-211ENST00000506690 ZNF772Q68DY9 489 aaPredicted RBP17.89■□□□□ 0.45
SQSTM1-211ENST00000506690 PRR5LQ6MZQ0 368 aa17.89■□□□□ 0.45
SQSTM1-211ENST00000506690 RHPN2Q8IUC4 686 aa17.89■□□□□ 0.45
SQSTM1-211ENST00000506690 NAT8LQ8N9F0 302 aa17.89■□□□□ 0.45
SQSTM1-211ENST00000506690 C7orf26Q96N11 449 aa17.89■□□□□ 0.45
SQSTM1-211ENST00000506690 PI4K2AQ9BTU6 479 aa17.89■□□□□ 0.45
SQSTM1-211ENST00000506690 TEKT3Q9BXF9 490 aa17.89■□□□□ 0.45
SQSTM1-211ENST00000506690 EP400Q96L91 3159 aa17.89■□□□□ 0.45
SQSTM1-211ENST00000506690 NDUFB10O96000 172 aa17.89■□□□□ 0.45
SQSTM1-211ENST00000506690 ITGA2BP08514 1039 aa17.89■□□□□ 0.45
SQSTM1-211ENST00000506690 GYS1P13807 737 aa17.89■□□□□ 0.45
SQSTM1-211ENST00000506690 PTPN7P35236 360 aa17.89■□□□□ 0.45
SQSTM1-211ENST00000506690 XIAPP98170 497 aa17.89■□□□□ 0.45
SQSTM1-211ENST00000506690 R3HDM1Q15032 1099 aaKnown RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms