RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 PADI6Q6TGC4 694 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 KDM7AQ6ZMT4 941 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 CATIPQ7Z7H3 387 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 ZNF589Q86UQ0 364 aaPredicted RBP3.7□□□□□ -1.82
TCOF1-208ENST00000506063 CDR2LQ86X02 465 aaPredicted RBP3.7□□□□□ -1.82
TCOF1-208ENST00000506063 IQCA1Q86XH1 822 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 GATAD2AQ86YP4 633 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 IFNLR1Q8IU57 520 aaPredicted RBP3.7□□□□□ -1.82
TCOF1-208ENST00000506063 EFCAB13Q8IY85 973 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 MIER1Q8N108 512 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 LSMEM2Q8N112 164 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 PGBD3Q8N328 593 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 ZNF579Q8NAF0 562 aaKnown RBP3.7□□□□□ -1.82
TCOF1-208ENST00000506063 CCDC26Q8TAB7 109 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 PI4K2BQ8TCG2 481 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 SAP25Q8TEE9 199 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 PIBF1Q8WXW3 757 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 FOXJ1Q92949 421 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 LENG9Q96B70 501 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 SGF29Q96ES7 293 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 MRGPRX1Q96LB2 322 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 SLC46A1Q96NT5 459 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 PPP1R10Q96QC0 940 aaKnown RBP3.7□□□□□ -1.82
TCOF1-208ENST00000506063 SLC22A12Q96S37 553 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 CCNL2Q96S94 520 aaPredicted RBP3.7□□□□□ -1.82
TCOF1-208ENST00000506063 MMS19Q96T76 1030 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 ORAI3Q9BRQ5 295 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 LINC00597Q9H2U6 94 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 POLR1BQ9H9Y6 1135 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 GOLGA2P5Q9HBQ8 144 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 ZSWIM6Q9HCJ5 1215 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 MRS2Q9HD23 443 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 TDP1Q9NUW8 608 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 CUEDC1Q9NWM3 386 aaPredicted RBP3.7□□□□□ -1.82
TCOF1-208ENST00000506063 WSB2Q9NYS7 404 aaPredicted RBP3.7□□□□□ -1.82
TCOF1-208ENST00000506063 USP36Q9P275 1121 aaKnown RBP3.7□□□□□ -1.82
TCOF1-208ENST00000506063 ANAPC2Q9UJX6 822 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 ANKRD6Q9Y2G4 727 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 COL4A3BPQ9Y5P4 624 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 POLEQ07864 2286 aa3.7□□□□□ -1.82
TCOF1-208ENST00000506063 A0A0D9SFI3 127 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 A0A1B0GTQ1 180 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 A0A1B0GUA9 196 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 TTLL13PA6NNM8 815 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 SYN3O14994 580 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 ADAMTS3O15072 1205 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 TBX3O15119 743 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 ZNF217O75362 1048 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 KAT7O95251 611 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 NPTXRO95502 500 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 LDOC1O95751 146 aaPredicted RBP3.69□□□□□ -1.82
TCOF1-208ENST00000506063 F11P03951 625 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 THP07101 528 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 OR4Q2P0C623 313 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 SRGAP2CP0DJJ0 459 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 NCAM1P13591 858 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 ATF6P18850 670 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 GNLYP22749 145 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 ACP1P24666 158 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 SMARCA1P28370 1054 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 NMT1P30419 496 aaKnown RBP3.69□□□□□ -1.82
TCOF1-208ENST00000506063 AXLP30530 894 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 INHBCP55103 352 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 PTENP60484 403 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 CYP4F2P78329 520 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 ASIC1P78348 528 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 MBTD1Q05BQ5 628 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 LAMTOR4Q0VGL1 99 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 DUSP4Q13115 394 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 ZSCAN23Q3MJ62 389 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 CTXN3Q4LDR2 81 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 ARHGAP15Q53QZ3 475 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 CCDC178Q5BJE1 867 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 IFIT1BQ5T764 474 aaKnown RBP3.69□□□□□ -1.82
TCOF1-208ENST00000506063 FHL5Q5TD97 284 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 DCAF12L1Q5VU92 463 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 SFMBT2Q5VUG0 894 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 CENPPQ6IPU0 288 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 B3GNT9Q6UX72 402 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 ANO5Q75V66 913 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 CYB5R4Q7L1T6 521 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 CLEC14AQ86T13 490 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 MAB21L3Q8N8X9 362 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 CADM4Q8NFZ8 388 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 PRPF31Q8WWY3 499 aaKnown RBP3.69□□□□□ -1.82
TCOF1-208ENST00000506063 ATP2A3Q93084 1043 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 MOCOSQ96EN8 888 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 TOE1Q96GM8 510 aaKnown RBP3.69□□□□□ -1.82
TCOF1-208ENST00000506063 TCTN2Q96GX1 697 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 YTHDC1Q96MU7 727 aaKnown RBP3.69□□□□□ -1.82
TCOF1-208ENST00000506063 PGLYRP2Q96PD5 576 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 ACOX2Q99424 681 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 ARHGAP9Q9BRR9 750 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 SPZ1Q9BXG8 430 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 UNKQ9C0B0 810 aaKnown RBP3.69□□□□□ -1.82
TCOF1-208ENST00000506063 MIR1-1HGQ9H1L0 117 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 ADNPQ9H2P0 1102 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 DHX33Q9H6R0 707 aaKnown RBP3.69□□□□□ -1.82
TCOF1-208ENST00000506063 KIF9Q9HAQ2 790 aa3.69□□□□□ -1.82
TCOF1-208ENST00000506063 THSD1Q9NS62 852 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms