RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 EBF1Q9UH73 591 aa17.27■□□□□ 0.36
PDLIM7-213ENST00000505074 EXOC7Q9UPT5 735 aa17.27■□□□□ 0.36
PDLIM7-213ENST00000505074 DERAQ9Y315 318 aa17.27■□□□□ 0.36
PDLIM7-213ENST00000505074 SRPRBQ9Y5M8 271 aaKnown RBP17.27■□□□□ 0.36
PDLIM7-213ENST00000505074 GCNT3O95395 438 aa17.26■□□□□ 0.35
PDLIM7-213ENST00000505074 ADRB2P07550 413 aa17.26■□□□□ 0.35
PDLIM7-213ENST00000505074 SYT1P21579 422 aa17.26■□□□□ 0.35
PDLIM7-213ENST00000505074 STAT6P42226 847 aa17.26■□□□□ 0.35
PDLIM7-213ENST00000505074 TAF6P49848 677 aa17.26■□□□□ 0.35
PDLIM7-213ENST00000505074 DGKEP52429 567 aa17.26■□□□□ 0.35
PDLIM7-213ENST00000505074 FBXO43Q4G163 708 aa17.26■□□□□ 0.35
PDLIM7-213ENST00000505074 SLC39A12Q504Y0 691 aa17.26■□□□□ 0.35
PDLIM7-213ENST00000505074 CENPPQ6IPU0 288 aa17.26■□□□□ 0.35
PDLIM7-213ENST00000505074 SYT13Q7L8C5 426 aa17.26■□□□□ 0.35
PDLIM7-213ENST00000505074 ZNF720Q7Z2F6 126 aa17.26■□□□□ 0.35
PDLIM7-213ENST00000505074 SYCP3Q8IZU3 236 aa17.26■□□□□ 0.35
PDLIM7-213ENST00000505074 HVCN1Q96D96 273 aa17.26■□□□□ 0.35
PDLIM7-213ENST00000505074 GCNAQ96QF7 691 aa17.26■□□□□ 0.35
PDLIM7-213ENST00000505074 FAM83CQ9BQN1 747 aa17.26■□□□□ 0.35
PDLIM7-213ENST00000505074 ST6GALNAC4Q9H4F1 302 aa17.26■□□□□ 0.35
PDLIM7-213ENST00000505074 DPP3Q9NY33 737 aa17.26■□□□□ 0.35
PDLIM7-213ENST00000505074 SEL1LQ9UBV2 794 aa17.26■□□□□ 0.35
PDLIM7-213ENST00000505074 DSEQ9UL01 958 aa17.26■□□□□ 0.35
PDLIM7-213ENST00000505074 C2CD2Q9Y426 696 aa17.26■□□□□ 0.35
PDLIM7-213ENST00000505074 ASCC3Q8N3C0 2202 aaKnown RBP17.26■□□□□ 0.35
PDLIM7-213ENST00000505074 SCN1AP35498 2009 aa17.25■□□□□ 0.35
PDLIM7-213ENST00000505074 MYMKA6NI61 221 aa17.25■□□□□ 0.35
PDLIM7-213ENST00000505074 PIRO00625 290 aa17.25■□□□□ 0.35
PDLIM7-213ENST00000505074 CYB561D2O14569 222 aa17.25■□□□□ 0.35
PDLIM7-213ENST00000505074 GAP43P17677 238 aa17.25■□□□□ 0.35
PDLIM7-213ENST00000505074 PAX3P23760 479 aa17.25■□□□□ 0.35
PDLIM7-213ENST00000505074 CYP4F8P98187 520 aa17.25■□□□□ 0.35
PDLIM7-213ENST00000505074 VEPH1Q14D04 833 aa17.25■□□□□ 0.35
PDLIM7-213ENST00000505074 POSTNQ15063 836 aa17.25■□□□□ 0.35
PDLIM7-213ENST00000505074 TAF12Q16514 161 aa17.25■□□□□ 0.35
PDLIM7-213ENST00000505074 MGAT5BQ3V5L5 792 aa17.25■□□□□ 0.35
PDLIM7-213ENST00000505074 PMS2CLQ68D20 193 aa17.25■□□□□ 0.35
PDLIM7-213ENST00000505074 CCDC73Q6ZRK6 1079 aa17.25■□□□□ 0.35
PDLIM7-213ENST00000505074 CYP2U1Q7Z449 544 aa17.25■□□□□ 0.35
PDLIM7-213ENST00000505074 THEM5Q8N1Q8 247 aa17.25■□□□□ 0.35
PDLIM7-213ENST00000505074 TTC9BQ8N6N2 239 aa17.25■□□□□ 0.35
PDLIM7-213ENST00000505074 RPLP0P6Q8NHW5 317 aa17.25■□□□□ 0.35
PDLIM7-213ENST00000505074 ACDQ96AP0 544 aa17.25■□□□□ 0.35
PDLIM7-213ENST00000505074 ACCSQ96QU6 501 aa17.25■□□□□ 0.35
PDLIM7-213ENST00000505074 FAM213AQ9BRX8 229 aa17.25■□□□□ 0.35
PDLIM7-213ENST00000505074 PANK2Q9BZ23 570 aa17.25■□□□□ 0.35
PDLIM7-213ENST00000505074 EBF3Q9H4W6 596 aa17.25■□□□□ 0.35
PDLIM7-213ENST00000505074 HPS4Q9NQG7 708 aa17.25■□□□□ 0.35
PDLIM7-213ENST00000505074 PCNX2A6NKB5 2137 aa17.24■□□□□ 0.35
PDLIM7-213ENST00000505074 DSPP15924 2871 aaKnown RBP17.24■□□□□ 0.35
PDLIM7-213ENST00000505074 ANO9A1A5B4 782 aa17.24■□□□□ 0.35
PDLIM7-213ENST00000505074 IL18RAPO95256 599 aa17.24■□□□□ 0.35
PDLIM7-213ENST00000505074 CDC25CP30307 473 aa17.24■□□□□ 0.35
PDLIM7-213ENST00000505074 GALK1P51570 392 aa17.24■□□□□ 0.35
PDLIM7-213ENST00000505074 IRX4P78413 519 aa17.24■□□□□ 0.35
PDLIM7-213ENST00000505074 TFAMQ00059 246 aaKnown RBP17.24■□□□□ 0.35
PDLIM7-213ENST00000505074 DMC1Q14565 340 aa17.24■□□□□ 0.35
PDLIM7-213ENST00000505074 SV2CQ496J9 727 aa17.24■□□□□ 0.35
PDLIM7-213ENST00000505074 USP39Q53GS9 565 aaKnown RBP17.24■□□□□ 0.35
PDLIM7-213ENST00000505074 OR10T2Q8NGX3 314 aa17.24■□□□□ 0.35
PDLIM7-213ENST00000505074 SAAL1Q96ER3 474 aa17.24■□□□□ 0.35
PDLIM7-213ENST00000505074 ZNF560Q96MR9 790 aa17.24■□□□□ 0.35
PDLIM7-213ENST00000505074 SMG9Q9H0W8 520 aaKnown RBP17.24■□□□□ 0.35
PDLIM7-213ENST00000505074 ZMYM5Q9UJ78 669 aa17.24■□□□□ 0.35
PDLIM7-213ENST00000505074 KLK13Q9UKR3 277 aa17.24■□□□□ 0.35
PDLIM7-213ENST00000505074 NBEAQ8NFP9 2946 aa17.23■□□□□ 0.35
PDLIM7-213ENST00000505074 PATE3B3GLJ2 98 aa17.23■□□□□ 0.35
PDLIM7-213ENST00000505074 RDXP35241 583 aaKnown RBP17.23■□□□□ 0.35
PDLIM7-213ENST00000505074 KCNA1Q09470 495 aa17.23■□□□□ 0.35
PDLIM7-213ENST00000505074 LMAN2Q12907 356 aa17.23■□□□□ 0.35
PDLIM7-213ENST00000505074 L1TD1Q5T7N2 865 aaKnown RBP17.23■□□□□ 0.35
PDLIM7-213ENST00000505074 TRIM68Q6AZZ1 485 aa17.23■□□□□ 0.35
PDLIM7-213ENST00000505074 EFCAB13Q8IY85 973 aa17.23■□□□□ 0.35
PDLIM7-213ENST00000505074 PDILTQ8N807 584 aa17.23■□□□□ 0.35
PDLIM7-213ENST00000505074 CHFRQ96EP1 664 aa17.23■□□□□ 0.35
PDLIM7-213ENST00000505074 USP28Q96RU2 1077 aa17.23■□□□□ 0.35
PDLIM7-213ENST00000505074 P2RY13Q9BPV8 354 aa17.23■□□□□ 0.35
PDLIM7-213ENST00000505074 LPIN3Q9BQK8 851 aa17.23■□□□□ 0.35
PDLIM7-213ENST00000505074 SLC46A2Q9BY10 475 aa17.23■□□□□ 0.35
PDLIM7-213ENST00000505074 FBRSL1Q9HCM7 1045 aaKnown RBP17.23■□□□□ 0.35
PDLIM7-213ENST00000505074 ABI2Q9NYB9 513 aaPredicted RBP17.23■□□□□ 0.35
PDLIM7-213ENST00000505074 HSFX1Q9UBD0 423 aa17.23■□□□□ 0.35
PDLIM7-213ENST00000505074 INVSQ9Y283 1065 aa17.23■□□□□ 0.35
PDLIM7-213ENST00000505074 PCDHB13Q9Y5F0 798 aa17.23■□□□□ 0.35
PDLIM7-213ENST00000505074 STYXL1Q9Y6J8 313 aa17.23■□□□□ 0.35
PDLIM7-213ENST00000505074 WDFY3Q8IZQ1 3526 aa17.23■□□□□ 0.35
PDLIM7-213ENST00000505074 OTOL1A6NHN0 477 aaPredicted RBP17.22■□□□□ 0.35
PDLIM7-213ENST00000505074 CYP11A1P05108 521 aa17.22■□□□□ 0.35
PDLIM7-213ENST00000505074 TUFMP49411 452 aaKnown RBP17.22■□□□□ 0.35
PDLIM7-213ENST00000505074 STK38Q15208 465 aa17.22■□□□□ 0.35
PDLIM7-213ENST00000505074 WSCD1Q658N2 575 aa17.22■□□□□ 0.35
PDLIM7-213ENST00000505074 CC2D1AQ6P1N0 951 aaPredicted RBP17.22■□□□□ 0.35
PDLIM7-213ENST00000505074 CMTM8Q8IZV2 173 aa17.22■□□□□ 0.35
PDLIM7-213ENST00000505074 GIPC2Q8TF65 315 aa17.22■□□□□ 0.35
PDLIM7-213ENST00000505074 DNAJC19Q96DA6 116 aa17.22■□□□□ 0.35
PDLIM7-213ENST00000505074 ZCWPW1Q9H0M4 648 aa17.22■□□□□ 0.35
PDLIM7-213ENST00000505074 PANK4Q9NVE7 773 aa17.22■□□□□ 0.35
PDLIM7-213ENST00000505074 RBAKQ9NYW8 714 aaPredicted RBP17.22■□□□□ 0.35
PDLIM7-213ENST00000505074 DMXL2Q8TDJ6 3036 aa17.22■□□□□ 0.35
PDLIM7-213ENST00000505074 OBSL1O75147 1896 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms