RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 YAF2Q8IY57 180 aa15.23■□□□□ 0.03
HOXC9-202ENST00000504557 PKMYT1Q99640 499 aa15.23■□□□□ 0.03
HOXC9-202ENST00000504557 TRMT61BQ9BVS5 477 aaKnown RBP15.23■□□□□ 0.03
HOXC9-202ENST00000504557 XYLT2Q9H1B5 865 aa15.23■□□□□ 0.03
HOXC9-202ENST00000504557 HEBP1Q9NRV9 189 aa15.23■□□□□ 0.03
HOXC9-202ENST00000504557 HOOK1Q9UJC3 728 aaKnown RBP15.23■□□□□ 0.03
HOXC9-202ENST00000504557 NME7Q9Y5B8 376 aa15.23■□□□□ 0.03
HOXC9-202ENST00000504557 SLC38A8A6NNN8 435 aa15.22■□□□□ 0.03
HOXC9-202ENST00000504557 LRRN2O75325 713 aa15.22■□□□□ 0.03
HOXC9-202ENST00000504557 FGF19O95750 216 aa15.22■□□□□ 0.03
HOXC9-202ENST00000504557 CDC25CP30307 473 aa15.22■□□□□ 0.03
HOXC9-202ENST00000504557 ATICP31939 592 aa15.22■□□□□ 0.03
HOXC9-202ENST00000504557 PSMC2P35998 433 aaKnown RBP15.22■□□□□ 0.03
HOXC9-202ENST00000504557 ANP32AP39687 249 aaKnown RBP15.22■□□□□ 0.03
HOXC9-202ENST00000504557 CLCN5P51795 746 aa15.22■□□□□ 0.03
HOXC9-202ENST00000504557 AP3M2P53677 418 aa15.22■□□□□ 0.03
HOXC9-202ENST00000504557 PFKPQ01813 784 aa15.22■□□□□ 0.03
HOXC9-202ENST00000504557 NHLH1Q02575 133 aa15.22■□□□□ 0.03
HOXC9-202ENST00000504557 TCF15Q12870 199 aa15.22■□□□□ 0.03
HOXC9-202ENST00000504557 IFRD2Q12894 506 aaPredicted RBP15.22■□□□□ 0.03
HOXC9-202ENST00000504557 ORC1Q13415 861 aa15.22■□□□□ 0.03
HOXC9-202ENST00000504557 ZNF658Q5TYW1 1059 aaPredicted RBP15.22■□□□□ 0.03
HOXC9-202ENST00000504557 TPRG1Q6ZUI0 275 aa15.22■□□□□ 0.03
HOXC9-202ENST00000504557 SV2AQ7L0J3 742 aa15.22■□□□□ 0.03
HOXC9-202ENST00000504557 MAB21L3Q8N8X9 362 aa15.22■□□□□ 0.03
HOXC9-202ENST00000504557 TTC8Q8TAM2 541 aa15.22■□□□□ 0.03
HOXC9-202ENST00000504557 SPATA18Q8TC71 538 aa15.22■□□□□ 0.03
HOXC9-202ENST00000504557 TMC2Q8TDI7 906 aa15.22■□□□□ 0.03
HOXC9-202ENST00000504557 RSPRY1Q96DX4 576 aa15.22■□□□□ 0.03
HOXC9-202ENST00000504557 PCED1BQ96HM7 432 aa15.22■□□□□ 0.03
HOXC9-202ENST00000504557 GPR88Q9GZN0 384 aa15.22■□□□□ 0.03
HOXC9-202ENST00000504557 IL21Q9HBE4 155 aa15.22■□□□□ 0.03
HOXC9-202ENST00000504557 TRPC7Q9HCX4 862 aa15.22■□□□□ 0.03
HOXC9-202ENST00000504557 MYO16Q9Y6X6 1858 aa15.22■□□□□ 0.03
HOXC9-202ENST00000504557 HELZP42694 1942 aaKnown RBP15.21■□□□□ 0.03
HOXC9-202ENST00000504557 TRIM49BA6NDI0 452 aa15.21■□□□□ 0.03
HOXC9-202ENST00000504557 BIN1O00499 593 aa15.21■□□□□ 0.03
HOXC9-202ENST00000504557 CLDN5O00501 218 aa15.21■□□□□ 0.03
HOXC9-202ENST00000504557 ZNF263O14978 683 aa15.21■□□□□ 0.03
HOXC9-202ENST00000504557 PRAMEF12O95522 483 aa15.21■□□□□ 0.03
HOXC9-202ENST00000504557 HLA-DRAP01903 254 aa15.21■□□□□ 0.03
HOXC9-202ENST00000504557 CSH1P0DML2 217 aa15.21■□□□□ 0.03
HOXC9-202ENST00000504557 CSH2P0DML3 217 aa15.21■□□□□ 0.03
HOXC9-202ENST00000504557 HMGA1P17096 107 aaKnown RBP15.21■□□□□ 0.03
HOXC9-202ENST00000504557 PSMC3P17980 439 aa15.21■□□□□ 0.03
HOXC9-202ENST00000504557 PTPN1P18031 435 aaKnown RBP15.21■□□□□ 0.03
HOXC9-202ENST00000504557 ANXA13P27216 316 aa15.21■□□□□ 0.03
HOXC9-202ENST00000504557 PTPN5P54829 565 aa15.21■□□□□ 0.03
HOXC9-202ENST00000504557 MAPRE1Q15691 268 aaKnown RBP15.21■□□□□ 0.03
HOXC9-202ENST00000504557 ZACNQ401N2 412 aa15.21■□□□□ 0.03
HOXC9-202ENST00000504557 C1orf220Q5T0J3 134 aa15.21■□□□□ 0.03
HOXC9-202ENST00000504557 TXNDC8Q6A555 127 aa15.21■□□□□ 0.03
HOXC9-202ENST00000504557 FAM171BQ6P995 826 aa15.21■□□□□ 0.03
HOXC9-202ENST00000504557 LIMS2Q7Z4I7 341 aa15.21■□□□□ 0.03
HOXC9-202ENST00000504557 ATOH1Q92858 354 aaPredicted RBP15.21■□□□□ 0.03
HOXC9-202ENST00000504557 SHDQ96IW2 340 aa15.21■□□□□ 0.03
HOXC9-202ENST00000504557 ZFYVE19Q96K21 471 aa15.21■□□□□ 0.03
HOXC9-202ENST00000504557 GSDMAQ96QA5 445 aa15.21■□□□□ 0.03
HOXC9-202ENST00000504557 PHOX2BQ99453 314 aa15.21■□□□□ 0.03
HOXC9-202ENST00000504557 TSG101Q99816 390 aa15.21■□□□□ 0.03
HOXC9-202ENST00000504557 MED10Q9BTT4 135 aa15.21■□□□□ 0.03
HOXC9-202ENST00000504557 SDCBP2Q9H190 292 aa15.21■□□□□ 0.03
HOXC9-202ENST00000504557 KCNH6Q9H252 994 aa15.21■□□□□ 0.03
HOXC9-202ENST00000504557 ABCB6Q9NP58 842 aa15.21■□□□□ 0.03
HOXC9-202ENST00000504557 CIZ1Q9ULV3 898 aaPredicted RBP15.21■□□□□ 0.03
HOXC9-202ENST00000504557 SIT1Q9Y3P8 196 aa15.21■□□□□ 0.03
HOXC9-202ENST00000504557 ATG2BQ96BY7 2078 aa15.21■□□□□ 0.03
HOXC9-202ENST00000504557 COL4A2P08572 1712 aa15.2■□□□□ 0.02
HOXC9-202ENST00000504557 GALR2O43603 387 aaPredicted RBP15.2■□□□□ 0.02
HOXC9-202ENST00000504557 TACC1O75410 805 aa15.2■□□□□ 0.02
HOXC9-202ENST00000504557 EPB41P11171 864 aaKnown RBP15.2■□□□□ 0.02
HOXC9-202ENST00000504557 NLRP12P59046 1061 aa15.2■□□□□ 0.02
HOXC9-202ENST00000504557 CLDN10P78369 228 aa15.2■□□□□ 0.02
HOXC9-202ENST00000504557 PPP3CAQ08209 521 aa15.2■□□□□ 0.02
HOXC9-202ENST00000504557 SGSM1Q2NKQ1 1148 aa15.2■□□□□ 0.02
HOXC9-202ENST00000504557 CFAP221Q4G0U5 840 aa15.2■□□□□ 0.02
HOXC9-202ENST00000504557 ZCWPW2Q504Y3 356 aa15.2■□□□□ 0.02
HOXC9-202ENST00000504557 DCAF17Q5H9S7 520 aaPredicted RBP15.2■□□□□ 0.02
HOXC9-202ENST00000504557 TCERG1LQ5VWI1 586 aa15.2■□□□□ 0.02
HOXC9-202ENST00000504557 KLHL10Q6JEL2 608 aa15.2■□□□□ 0.02
HOXC9-202ENST00000504557 INTS8Q75QN2 995 aaKnown RBP15.2■□□□□ 0.02
HOXC9-202ENST00000504557 MYCBPAPQ8TBZ2 947 aa15.2■□□□□ 0.02
HOXC9-202ENST00000504557 MRPS31Q92665 395 aaKnown RBP15.2■□□□□ 0.02
HOXC9-202ENST00000504557 FUBP3Q96I24 572 aaKnown RBP eCLIP15.2■□□□□ 0.02
HOXC9-202ENST00000504557 TIGD1Q96MW7 591 aa15.2■□□□□ 0.02
HOXC9-202ENST00000504557 PRRX2Q99811 253 aa15.2■□□□□ 0.02
HOXC9-202ENST00000504557 MKNK1Q9BUB5 465 aa15.2■□□□□ 0.02
HOXC9-202ENST00000504557 SLC46A2Q9BY10 475 aa15.2■□□□□ 0.02
HOXC9-202ENST00000504557 TASP1Q9H6P5 420 aa15.2■□□□□ 0.02
HOXC9-202ENST00000504557 CHMP5Q9NZZ3 219 aa15.2■□□□□ 0.02
HOXC9-202ENST00000504557 MAN1B1Q9UKM7 699 aa15.2■□□□□ 0.02
HOXC9-202ENST00000504557 NDRG2Q9UN36 371 aaKnown RBP15.2■□□□□ 0.02
HOXC9-202ENST00000504557 MTF2Q9Y483 593 aaPredicted RBP15.2■□□□□ 0.02
HOXC9-202ENST00000504557 ARIH1Q9Y4X5 557 aaPredicted RBP15.2■□□□□ 0.02
HOXC9-202ENST00000504557 CACNA1IQ9P0X4 2223 aa15.2■□□□□ 0.02
HOXC9-202ENST00000504557 F8VP50 259 aa15.19■□□□□ 0.02
HOXC9-202ENST00000504557 CETN3O15182 167 aa15.19■□□□□ 0.02
HOXC9-202ENST00000504557 STAU1O95793 577 aaKnown RBP15.19■□□□□ 0.02
HOXC9-202ENST00000504557 ABL1P00519 1130 aa15.19■□□□□ 0.02
HOXC9-202ENST00000504557 F11P03951 625 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms