RNA–Protein interactions for RNA: ENST00000504431.1

UBE2B-204, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 2

Gene UBE2B, Length 235 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-204ENST00000504431 ZHX1Q9UKY1 873 aaPredicted RBP8.48□□□□□ -1.05
UBE2B-204ENST00000504431 MRPL11Q9Y3B7 192 aaKnown RBP8.48□□□□□ -1.05
UBE2B-204ENST00000504431 ABCB11O95342 1321 aa8.48□□□□□ -1.05
UBE2B-204ENST00000504431 ZNF236Q9UL36 1845 aa8.47□□□□□ -1.05
UBE2B-204ENST00000504431 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.47□□□□□ -1.05
UBE2B-204ENST00000504431 ADCY6O43306 1168 aa8.47□□□□□ -1.05
UBE2B-204ENST00000504431 FBXO21O94952 628 aa8.47□□□□□ -1.05
UBE2B-204ENST00000504431 EYA4O95677 639 aa8.47□□□□□ -1.05
UBE2B-204ENST00000504431 TFRCP02786 760 aaKnown RBP8.47□□□□□ -1.05
UBE2B-204ENST00000504431 CYBAP13498 195 aa8.47□□□□□ -1.05
UBE2B-204ENST00000504431 LINC00310P59036 64 aa8.47□□□□□ -1.05
UBE2B-204ENST00000504431 IGBP1P78318 339 aa8.47□□□□□ -1.05
UBE2B-204ENST00000504431 LRRC32Q14392 662 aa8.47□□□□□ -1.05
UBE2B-204ENST00000504431 STAT4Q14765 748 aa8.47□□□□□ -1.05
UBE2B-204ENST00000504431 UBE2SQ16763 222 aa8.47□□□□□ -1.05
UBE2B-204ENST00000504431 SKIDA1Q1XH10 827 aa8.47□□□□□ -1.05
UBE2B-204ENST00000504431 GJC2Q5T442 439 aaPredicted RBP8.47□□□□□ -1.05
UBE2B-204ENST00000504431 MAP3K21Q5TCX8 1036 aa8.47□□□□□ -1.05
UBE2B-204ENST00000504431 LIPIQ6XZB0 460 aa8.47□□□□□ -1.05
UBE2B-204ENST00000504431 FBXO16Q8IX29 292 aaPredicted RBP8.47□□□□□ -1.05
UBE2B-204ENST00000504431 FBXL16Q8N461 479 aa8.47□□□□□ -1.05
UBE2B-204ENST00000504431 U2AF1L4Q8WU68 220 aaKnown RBP8.47□□□□□ -1.05
UBE2B-204ENST00000504431 PWWP2AQ96N64 755 aa8.47□□□□□ -1.05
UBE2B-204ENST00000504431 LZTS2Q9BRK4 669 aa8.47□□□□□ -1.05
UBE2B-204ENST00000504431 GJB4Q9NTQ9 266 aa8.47□□□□□ -1.05
UBE2B-204ENST00000504431 SLC5A4Q9NY91 659 aa8.47□□□□□ -1.05
UBE2B-204ENST00000504431 RPTORQ8N122 1335 aa8.47□□□□□ -1.05
UBE2B-204ENST00000504431 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.46□□□□□ -1.06
UBE2B-204ENST00000504431 UBA6A0AVT1 1052 aaPredicted RBP8.46□□□□□ -1.06
UBE2B-204ENST00000504431 GPR39O43194 453 aa8.46□□□□□ -1.06
UBE2B-204ENST00000504431 SGPL1O95470 568 aa8.46□□□□□ -1.06
UBE2B-204ENST00000504431 CTDNEP1O95476 244 aa8.46□□□□□ -1.06
UBE2B-204ENST00000504431 KRT1P04264 644 aa8.46□□□□□ -1.06
UBE2B-204ENST00000504431 MYCLP12524 364 aaPredicted RBP8.46□□□□□ -1.06
UBE2B-204ENST00000504431 ALDH5A1P51649 535 aaPredicted RBP8.46□□□□□ -1.06
UBE2B-204ENST00000504431 EVCP57679 992 aa8.46□□□□□ -1.06
UBE2B-204ENST00000504431 SESN3P58005 492 aa8.46□□□□□ -1.06
UBE2B-204ENST00000504431 ST3GAL1Q11201 340 aa8.46□□□□□ -1.06
UBE2B-204ENST00000504431 ADAM9Q13443 819 aa8.46□□□□□ -1.06
UBE2B-204ENST00000504431 SSPNQ14714 243 aa8.46□□□□□ -1.06
UBE2B-204ENST00000504431 SEPT14Q6ZU15 432 aa8.46□□□□□ -1.06
UBE2B-204ENST00000504431 NECAB2Q7Z6G3 386 aa8.46□□□□□ -1.06
UBE2B-204ENST00000504431 DDX42Q86XP3 938 aaKnown RBP eCLIP8.46□□□□□ -1.06
UBE2B-204ENST00000504431 IL31RAQ8NI17 732 aa8.46□□□□□ -1.06
UBE2B-204ENST00000504431 DIS3LQ8TF46 1054 aaKnown RBP8.46□□□□□ -1.06
UBE2B-204ENST00000504431 SLC5A5Q92911 643 aa8.46□□□□□ -1.06
UBE2B-204ENST00000504431 ZNF274Q96GC6 653 aaPredicted RBP8.46□□□□□ -1.06
UBE2B-204ENST00000504431 C16orf92Q96LL3 132 aa8.46□□□□□ -1.06
UBE2B-204ENST00000504431 UIMC1Q96RL1 719 aa8.46□□□□□ -1.06
UBE2B-204ENST00000504431 RMDN3Q96TC7 470 aa8.46□□□□□ -1.06
UBE2B-204ENST00000504431 FOXB1Q99853 325 aa8.46□□□□□ -1.06
UBE2B-204ENST00000504431 SLC39A2Q9NP94 309 aa8.46□□□□□ -1.06
UBE2B-204ENST00000504431 GALNT8Q9NY28 637 aa8.46□□□□□ -1.06
UBE2B-204ENST00000504431 RTEL1Q9NZ71 1219 aa8.46□□□□□ -1.06
UBE2B-204ENST00000504431 PFASO15067 1338 aa8.46□□□□□ -1.06
UBE2B-204ENST00000504431 RBBP6Q7Z6E9 1792 aaKnown RBP8.45□□□□□ -1.06
UBE2B-204ENST00000504431 SMCO2A6NFE2 343 aa8.45□□□□□ -1.06
UBE2B-204ENST00000504431 ALG1L2C9J202 215 aa8.45□□□□□ -1.06
UBE2B-204ENST00000504431 GOLGA6L22H0YM25 854 aa8.45□□□□□ -1.06
UBE2B-204ENST00000504431 GCOM1H8Y6P7 765 aaPredicted RBP8.45□□□□□ -1.06
UBE2B-204ENST00000504431 MEIS2O14770 477 aa8.45□□□□□ -1.06
UBE2B-204ENST00000504431 CPLX1O14810 134 aa8.45□□□□□ -1.06
UBE2B-204ENST00000504431 PRPF3O43395 683 aaKnown RBP8.45□□□□□ -1.06
UBE2B-204ENST00000504431 JAK2O60674 1132 aa8.45□□□□□ -1.06
UBE2B-204ENST00000504431 PFKFB2O60825 505 aa8.45□□□□□ -1.06
UBE2B-204ENST00000504431 PGK1P00558 417 aa8.45□□□□□ -1.06
UBE2B-204ENST00000504431 GJB1P08034 283 aa8.45□□□□□ -1.06
UBE2B-204ENST00000504431 POLR2MP0CAP2 368 aa8.45□□□□□ -1.06
UBE2B-204ENST00000504431 SMARCA1P28370 1054 aa8.45□□□□□ -1.06
UBE2B-204ENST00000504431 THBS2P35442 1172 aa8.45□□□□□ -1.06
UBE2B-204ENST00000504431 NAPAP54920 295 aa8.45□□□□□ -1.06
UBE2B-204ENST00000504431 SMAD3P84022 425 aaKnown RBP8.45□□□□□ -1.06
UBE2B-204ENST00000504431 ACVR2BQ13705 512 aa8.45□□□□□ -1.06
UBE2B-204ENST00000504431 SMAD2Q15796 467 aaKnown RBP8.45□□□□□ -1.06
UBE2B-204ENST00000504431 TTC38Q5R3I4 469 aa8.45□□□□□ -1.06
UBE2B-204ENST00000504431 ARHGEF16Q5VV41 709 aa8.45□□□□□ -1.06
UBE2B-204ENST00000504431 MAMDC4Q6UXC1 1216 aa8.45□□□□□ -1.06
UBE2B-204ENST00000504431 PHYKPLQ8IUZ5 450 aa8.45□□□□□ -1.06
UBE2B-204ENST00000504431 C7orf31Q8N865 590 aa8.45□□□□□ -1.06
UBE2B-204ENST00000504431 ZNF610Q8N9Z0 462 aa8.45□□□□□ -1.06
UBE2B-204ENST00000504431 FNIP1Q8TF40 1166 aa8.45□□□□□ -1.06
UBE2B-204ENST00000504431 ERCC4Q92889 916 aaPredicted RBP8.45□□□□□ -1.06
UBE2B-204ENST00000504431 IL17RAQ96F46 866 aa8.45□□□□□ -1.06
UBE2B-204ENST00000504431 NOX5Q96PH1 765 aa8.45□□□□□ -1.06
UBE2B-204ENST00000504431 KATNBL1Q9H079 304 aa8.45□□□□□ -1.06
UBE2B-204ENST00000504431 ALDH8A1Q9H2A2 487 aaPredicted RBP8.45□□□□□ -1.06
UBE2B-204ENST00000504431 PSTPIP2Q9H939 334 aa8.45□□□□□ -1.06
UBE2B-204ENST00000504431 UPF2Q9HAU5 1272 aaKnown RBP8.45□□□□□ -1.06
UBE2B-204ENST00000504431 VPS54Q9P1Q0 977 aa8.45□□□□□ -1.06
UBE2B-204ENST00000504431 DDX20Q9UHI6 824 aaKnown RBP8.45□□□□□ -1.06
UBE2B-204ENST00000504431 CNPY2Q9Y2B0 182 aa8.45□□□□□ -1.06
UBE2B-204ENST00000504431 FRMPD3Q5JV73 1810 aa8.45□□□□□ -1.06
UBE2B-204ENST00000504431 CCDC196A0A1B0GTZ2 297 aa8.44□□□□□ -1.06
UBE2B-204ENST00000504431 MYADML2A6NDP7 307 aa8.44□□□□□ -1.06
UBE2B-204ENST00000504431 NPIPB6E9PJ23 425 aa8.44□□□□□ -1.06
UBE2B-204ENST00000504431 TGM5O43548 720 aa8.44□□□□□ -1.06
UBE2B-204ENST00000504431 EIF5BO60841 1220 aaKnown RBP8.44□□□□□ -1.06
UBE2B-204ENST00000504431 PLA2G1BP04054 148 aaKnown RBP8.44□□□□□ -1.06
UBE2B-204ENST00000504431 SCG2P13521 617 aa8.44□□□□□ -1.06
UBE2B-204ENST00000504431 FDPSP14324 419 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms