RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 ARPP19P56211 112 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 EEF1A1P68104 462 aaKnown RBP6.5□□□□□ -1.37
CLCN3-204ENST00000504131 PPP2R2BQ00005 443 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 EEF1A2Q05639 463 aaKnown RBP6.5□□□□□ -1.37
CLCN3-204ENST00000504131 INTS6LQ5JSJ4 861 aaKnown RBP6.5□□□□□ -1.37
CLCN3-204ENST00000504131 EEF1A1P5Q5VTE0 462 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 TRPM8Q7Z2W7 1104 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 JAMLQ86YT9 394 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 LRRC8AQ8IWT6 810 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 ATAD1Q8NBU5 361 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 KCNH5Q8NCM2 988 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 PHF12Q96QT6 1004 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 SH2B1Q9NRF2 756 aaPredicted RBP6.5□□□□□ -1.37
CLCN3-204ENST00000504131 HEY1Q9Y5J3 304 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 MAGI3Q5TCQ9 1506 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 ZNF879B4DU55 563 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 KPNA3O00505 521 aaPredicted RBP6.5□□□□□ -1.37
CLCN3-204ENST00000504131 AREL1O15033 823 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 EIF4A3P38919 411 aaKnown RBP6.5□□□□□ -1.37
CLCN3-204ENST00000504131 ILF3Q12906 894 aaKnown RBP eCLIP6.5□□□□□ -1.37
CLCN3-204ENST00000504131 FBXO42Q6P3S6 717 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 CRELD2Q6UXH1 353 aaPredicted RBP6.5□□□□□ -1.37
CLCN3-204ENST00000504131 ANKK1Q8NFD2 765 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 IPMKQ8NFU5 416 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 CNBD2Q96M20 576 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 CMTM3Q96MX0 182 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 RMDN3Q96TC7 470 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 CIB1Q99828 191 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 ACAD9Q9H845 621 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 ABCB9Q9NP78 766 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 MINK1Q8N4C8 1332 aaPredicted RBP6.5□□□□□ -1.37
CLCN3-204ENST00000504131 ATP10AO60312 1499 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 FAM92AA1XBS5 289 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 KRBA1A5PL33 1030 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 CENPBD1B2RD01 187 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 NR1I2O75469 434 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 FGAP02671 866 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 HMGN1P05114 100 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 GGCXP38435 758 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 MTIF2P46199 727 aaKnown RBP6.5□□□□□ -1.37
CLCN3-204ENST00000504131 RAB15P59190 212 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 ARF5P84085 180 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 STRN3Q13033 797 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 COG2Q14746 738 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 OCLNQ16625 522 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 PTGISQ16647 500 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 PPP1R26Q5T8A7 1209 aaPredicted RBP6.5□□□□□ -1.37
CLCN3-204ENST00000504131 TCEAL6Q6IPX3 200 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 C8orf74Q6P047 294 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 LAYNQ6UX15 382 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 ATG9AQ7Z3C6 839 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 SVIPQ8NHG7 77 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 ZCCHC2Q9C0B9 1178 aaKnown RBP6.5□□□□□ -1.37
CLCN3-204ENST00000504131 WASH6PQ9NQA3 447 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 LMBRD1Q9NUN5 540 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 PCDHGB5Q9Y5G0 923 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 ATP8B3O60423 1300 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 TNFRSF10BO14763 440 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 STX10O60499 249 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 CDC40O60508 579 aaKnown RBP eCLIP6.5□□□□□ -1.37
CLCN3-204ENST00000504131 SRGAP2O75044 1071 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 H2AFXP16104 143 aaPredicted RBP6.5□□□□□ -1.37
CLCN3-204ENST00000504131 SCTRP47872 440 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 CEBPAP49715 358 aaPredicted RBP6.5□□□□□ -1.37
CLCN3-204ENST00000504131 ATP12AP54707 1039 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 TYRO3Q06418 890 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 UGT3A2Q3SY77 523 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 KRT39Q6A163 491 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 KRT25Q7Z3Z0 450 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 CYTH2Q99418 400 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 HEPHQ9BQS7 1158 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 TREM1Q9NP99 234 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 INTS10Q9NVR2 710 aaKnown RBP6.5□□□□□ -1.37
CLCN3-204ENST00000504131 IMPAD1Q9NX62 359 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 MOCS1Q9NZB8 636 aa6.5□□□□□ -1.37
CLCN3-204ENST00000504131 GMNCA6NCL1 334 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 EEF1B2P24534 225 aaKnown RBP6.49□□□□□ -1.37
CLCN3-204ENST00000504131 SFNP31947 248 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 HPCAP84074 193 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 NAB1Q13506 487 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 PTPN21Q16825 1174 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 MMEL1Q495T6 779 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 LRRC24Q50LG9 513 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 IFIT1BQ5T764 474 aaKnown RBP6.49□□□□□ -1.37
CLCN3-204ENST00000504131 KRT80Q6KB66 452 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 ZNF551Q7Z340 670 aaPredicted RBP6.49□□□□□ -1.37
CLCN3-204ENST00000504131 SLC22A9Q8IVM8 553 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 ULK2Q8IYT8 1036 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 GATAD2BQ8WXI9 593 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 GAS2L1Q99501 681 aaPredicted RBP6.49□□□□□ -1.37
CLCN3-204ENST00000504131 ARMC1Q9NVT9 282 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 VAV3Q9UKW4 847 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 BAG5Q9UL15 447 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 FAM32AQ9Y421 112 aaKnown RBP6.49□□□□□ -1.37
CLCN3-204ENST00000504131 SGCEO43556 437 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 NPR2P20594 1047 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 KELP23276 732 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 MAT2AP31153 395 aaKnown RBP6.49□□□□□ -1.37
CLCN3-204ENST00000504131 GTF2H1P32780 548 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 KRT81Q14533 505 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms