RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 WACQ9BTA9 647 aa3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 NAA15Q9BXJ9 866 aaKnown RBP3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 LRRC27Q9C0I9 530 aa3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 BRD9Q9H8M2 597 aa3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 PIH1D1Q9NWS0 290 aaKnown RBP3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 JKAMPQ9P055 326 aa3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 ZDHHC8Q9ULC8 765 aa3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 SLC45A2Q9UMX9 530 aa3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 AOX1Q06278 1338 aa3.01□□□□□ -1.93
HMGB1P35-201ENST00000503360 PRSS29PA6NIE9 313 aa3.01□□□□□ -1.93
HMGB1P35-201ENST00000503360 MPPED1O15442 326 aa3.01□□□□□ -1.93
HMGB1P35-201ENST00000503360 FRS3O43559 492 aa3.01□□□□□ -1.93
HMGB1P35-201ENST00000503360 AGFG2O95081 481 aa3.01□□□□□ -1.93
HMGB1P35-201ENST00000503360 PRSS23O95084 383 aa3.01□□□□□ -1.93
HMGB1P35-201ENST00000503360 MYF5P13349 255 aa3.01□□□□□ -1.93
HMGB1P35-201ENST00000503360 GCSHP23434 173 aa3.01□□□□□ -1.93
HMGB1P35-201ENST00000503360 VAV2P52735 878 aa3.01□□□□□ -1.93
HMGB1P35-201ENST00000503360 PSMC1P62191 440 aaKnown RBP3.01□□□□□ -1.93
HMGB1P35-201ENST00000503360 BIRC2Q13490 618 aa3.01□□□□□ -1.93
HMGB1P35-201ENST00000503360 LAMB3Q13751 1172 aa3.01□□□□□ -1.93
HMGB1P35-201ENST00000503360 RAPGEF1Q13905 1077 aa3.01□□□□□ -1.93
HMGB1P35-201ENST00000503360 KIF22Q14807 665 aa3.01□□□□□ -1.93
HMGB1P35-201ENST00000503360 CYP2A13Q16696 494 aa3.01□□□□□ -1.93
HMGB1P35-201ENST00000503360 MORN5Q5VZ52 161 aa3.01□□□□□ -1.93
HMGB1P35-201ENST00000503360 FCRLBQ6BAA4 426 aa3.01□□□□□ -1.93
HMGB1P35-201ENST00000503360 ZNF365Q70YC5 407 aa3.01□□□□□ -1.93
HMGB1P35-201ENST00000503360 C11orf96Q7Z7L8 435 aa3.01□□□□□ -1.93
HMGB1P35-201ENST00000503360 PDSS2Q86YH6 399 aa3.01□□□□□ -1.93
HMGB1P35-201ENST00000503360 FITM2Q8N6M3 262 aa3.01□□□□□ -1.93
HMGB1P35-201ENST00000503360 AOPEPQ8N6M6 819 aa3.01□□□□□ -1.93
HMGB1P35-201ENST00000503360 PCSK9Q8NBP7 692 aaKnown RBP3.01□□□□□ -1.93
HMGB1P35-201ENST00000503360 FBXO41Q8TF61 875 aa3.01□□□□□ -1.93
HMGB1P35-201ENST00000503360 ZNF48Q96MX3 618 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P35-201ENST00000503360 TBCBQ99426 244 aa3.01□□□□□ -1.93
HMGB1P35-201ENST00000503360 P2RX7Q99572 595 aaKnown RBP3.01□□□□□ -1.93
HMGB1P35-201ENST00000503360 ZNF700Q9H0M5 742 aa3.01□□□□□ -1.93
HMGB1P35-201ENST00000503360 NUP62CLQ9H1M0 184 aa3.01□□□□□ -1.93
HMGB1P35-201ENST00000503360 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P35-201ENST00000503360 CFAP97Q9P2B7 532 aa3.01□□□□□ -1.93
HMGB1P35-201ENST00000503360 CPNE7Q9UBL6 633 aa3.01□□□□□ -1.93
HMGB1P35-201ENST00000503360 ZNF580Q9UK33 172 aa3.01□□□□□ -1.93
HMGB1P35-201ENST00000503360 OGDHLQ9ULD0 1010 aa3.01□□□□□ -1.93
HMGB1P35-201ENST00000503360 PHTF1Q9UMS5 762 aa3.01□□□□□ -1.93
HMGB1P35-201ENST00000503360 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.01□□□□□ -1.93
HMGB1P35-201ENST00000503360 ZNF785A8K8V0 405 aa3□□□□□ -1.93
HMGB1P35-201ENST00000503360 RHPN2P1A8MT19 583 aa3□□□□□ -1.93
HMGB1P35-201ENST00000503360 MYO1FO00160 1098 aa3□□□□□ -1.93
HMGB1P35-201ENST00000503360 TBX3O15119 743 aa3□□□□□ -1.93
HMGB1P35-201ENST00000503360 TP73O15350 636 aa3□□□□□ -1.93
HMGB1P35-201ENST00000503360 INSIG1O15503 277 aa3□□□□□ -1.93
HMGB1P35-201ENST00000503360 PROM1O43490 865 aa3□□□□□ -1.93
HMGB1P35-201ENST00000503360 PEX1O43933 1283 aa3□□□□□ -1.93
HMGB1P35-201ENST00000503360 NTN1O95631 604 aa3□□□□□ -1.93
HMGB1P35-201ENST00000503360 GNAI2P04899 355 aa3□□□□□ -1.93
HMGB1P35-201ENST00000503360 RARBP10826 455 aa3□□□□□ -1.93
HMGB1P35-201ENST00000503360 BRAFP15056 766 aa3□□□□□ -1.93
HMGB1P35-201ENST00000503360 PIK3CBP42338 1070 aa3□□□□□ -1.93
HMGB1P35-201ENST00000503360 CCT4P50991 539 aaKnown RBP3□□□□□ -1.93
HMGB1P35-201ENST00000503360 AK2P54819 239 aa3□□□□□ -1.93
HMGB1P35-201ENST00000503360 SUMO3P55854 103 aaPredicted RBP3□□□□□ -1.93
HMGB1P35-201ENST00000503360 FMO1Q01740 532 aa3□□□□□ -1.93
HMGB1P35-201ENST00000503360 IFIT5Q13325 482 aaKnown RBP3□□□□□ -1.93
HMGB1P35-201ENST00000503360 FHL1Q13642 323 aa3□□□□□ -1.93
HMGB1P35-201ENST00000503360 CNGA2Q16280 664 aa3□□□□□ -1.93
HMGB1P35-201ENST00000503360 LONRF1Q17RB8 773 aa3□□□□□ -1.93
HMGB1P35-201ENST00000503360 MTX3Q5HYI7 312 aa3□□□□□ -1.93
HMGB1P35-201ENST00000503360 EMC10Q5UCC4 262 aa3□□□□□ -1.93
HMGB1P35-201ENST00000503360 TSHZ3Q63HK5 1081 aa3□□□□□ -1.93
HMGB1P35-201ENST00000503360 KRT78Q8N1N4 520 aa3□□□□□ -1.93
HMGB1P35-201ENST00000503360 SAMD3Q8N6K7 520 aa3□□□□□ -1.93
HMGB1P35-201ENST00000503360 SLC17A8Q8NDX2 589 aa3□□□□□ -1.93
HMGB1P35-201ENST00000503360 TMIEQ8NEW7 156 aa3□□□□□ -1.93
HMGB1P35-201ENST00000503360 PMM1Q92871 262 aa3□□□□□ -1.93
HMGB1P35-201ENST00000503360 PHKBQ93100 1093 aa3□□□□□ -1.93
HMGB1P35-201ENST00000503360 NACC2Q96BF6 587 aa3□□□□□ -1.93
HMGB1P35-201ENST00000503360 PTCD3Q96EY7 689 aaKnown RBP3□□□□□ -1.93
HMGB1P35-201ENST00000503360 TNIP3Q96KP6 325 aa3□□□□□ -1.93
HMGB1P35-201ENST00000503360 MED15Q96RN5 788 aa3□□□□□ -1.93
HMGB1P35-201ENST00000503360 RPS6KC1Q96S38 1066 aa3□□□□□ -1.93
HMGB1P35-201ENST00000503360 TRIM54Q9BYV2 358 aa3□□□□□ -1.93
HMGB1P35-201ENST00000503360 IMPG2Q9BZV3 1241 aa3□□□□□ -1.93
HMGB1P35-201ENST00000503360 UNKLQ9H9P5 680 aaKnown RBP3□□□□□ -1.93
HMGB1P35-201ENST00000503360 ZNF287Q9HBT7 754 aa3□□□□□ -1.93
HMGB1P35-201ENST00000503360 GPR35Q9HC97 309 aa3□□□□□ -1.93
HMGB1P35-201ENST00000503360 RLIMQ9NVW2 624 aa3□□□□□ -1.93
HMGB1P35-201ENST00000503360 CORO2BQ9UQ03 480 aa3□□□□□ -1.93
HMGB1P35-201ENST00000503360 SNX13Q9Y5W8 968 aa3□□□□□ -1.93
HMGB1P35-201ENST00000503360 WNT6Q9Y6F9 365 aa3□□□□□ -1.93
HMGB1P35-201ENST00000503360 ARID4BQ4LE39 1312 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 MANSC4A6NHS7 340 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 LINC01548A6NM66 108 aa2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 ISM1B1AKI9 464 aa2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 PRR23D1E9PI22 279 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 BTN3A1O00481 513 aa2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 KPNA5O15131 536 aa2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 TBC1D4O60343 1298 aa2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 LATS1O95835 1130 aa2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 ANXA1P04083 346 aa2.99□□□□□ -1.93
HMGB1P35-201ENST00000503360 PRR23D2P0DMB1 279 aaPredicted RBP2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms