RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 SULT2A1Q06520 285 aa5.43□□□□□ -1.54
CLDND1-208ENST00000503004 LSAMPQ13449 338 aa5.43□□□□□ -1.54
CLDND1-208ENST00000503004 EMC2Q15006 297 aa5.43□□□□□ -1.54
CLDND1-208ENST00000503004 RCN1Q15293 331 aa5.43□□□□□ -1.54
CLDND1-208ENST00000503004 PPP2R5EQ16537 467 aa5.43□□□□□ -1.54
CLDND1-208ENST00000503004 CLEC16AQ2KHT3 1053 aa5.43□□□□□ -1.54
CLDND1-208ENST00000503004 SGO2Q562F6 1265 aa5.43□□□□□ -1.54
CLDND1-208ENST00000503004 C9orf131Q5VYM1 1079 aa5.43□□□□□ -1.54
CLDND1-208ENST00000503004 DENND2CQ68D51 928 aa5.43□□□□□ -1.54
CLDND1-208ENST00000503004 TMEM270Q6UE05 265 aa5.43□□□□□ -1.54
CLDND1-208ENST00000503004 USP37Q86T82 979 aa5.43□□□□□ -1.54
CLDND1-208ENST00000503004 PRUNE1Q86TP1 453 aa5.43□□□□□ -1.54
CLDND1-208ENST00000503004 CCNJLQ8IV13 435 aa5.43□□□□□ -1.54
CLDND1-208ENST00000503004 ARFGAP2Q8N6H7 521 aa5.43□□□□□ -1.54
CLDND1-208ENST00000503004 CCDC197Q8NCU1 140 aa5.43□□□□□ -1.54
CLDND1-208ENST00000503004 MCPH1Q8NEM0 835 aa5.43□□□□□ -1.54
CLDND1-208ENST00000503004 OR5B17Q8NGF7 314 aa5.43□□□□□ -1.54
CLDND1-208ENST00000503004 TMC2Q8TDI7 906 aa5.43□□□□□ -1.54
CLDND1-208ENST00000503004 ASAP3Q8TDY4 903 aa5.43□□□□□ -1.54
CLDND1-208ENST00000503004 WDR60Q8WVS4 1066 aa5.43□□□□□ -1.54
CLDND1-208ENST00000503004 PSPC1Q8WXF1 523 aaKnown RBP5.43□□□□□ -1.54
CLDND1-208ENST00000503004 PTPRN2Q92932 1015 aa5.43□□□□□ -1.54
CLDND1-208ENST00000503004 CLMNQ96JQ2 1002 aa5.43□□□□□ -1.54
CLDND1-208ENST00000503004 IFT74Q96LB3 600 aa5.43□□□□□ -1.54
CLDND1-208ENST00000503004 MPHOSPH6Q99547 160 aaKnown RBP5.43□□□□□ -1.54
CLDND1-208ENST00000503004 C11orf70Q9BRQ4 267 aa5.43□□□□□ -1.54
CLDND1-208ENST00000503004 TINF2Q9BSI4 451 aa5.43□□□□□ -1.54
CLDND1-208ENST00000503004 IRF2BPLQ9H1B7 796 aa5.43□□□□□ -1.54
CLDND1-208ENST00000503004 VPS33BQ9H267 617 aa5.43□□□□□ -1.54
CLDND1-208ENST00000503004 C17orf75Q9HAS0 396 aa5.43□□□□□ -1.54
CLDND1-208ENST00000503004 APOBEC3GQ9HC16 384 aaKnown RBP5.43□□□□□ -1.54
CLDND1-208ENST00000503004 UVRAGQ9P2Y5 699 aa5.43□□□□□ -1.54
CLDND1-208ENST00000503004 CIDEBQ9UHD4 219 aa5.43□□□□□ -1.54
CLDND1-208ENST00000503004 RASAL2Q9UJF2 1139 aa5.43□□□□□ -1.54
CLDND1-208ENST00000503004 AGO2Q9UKV8 859 aaKnown RBP5.43□□□□□ -1.54
CLDND1-208ENST00000503004 MYPNQ86TC9 1320 aa5.43□□□□□ -1.54
CLDND1-208ENST00000503004 ZNF541Q9H0D2 1346 aa5.43□□□□□ -1.54
CLDND1-208ENST00000503004 UBOX5O94941 541 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 VNN1O95497 513 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 ACSL3O95573 720 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 GARTP22102 1010 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 GLRA2P23416 452 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 PIK3CAP42336 1068 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 NSFP46459 744 aaKnown RBP5.42□□□□□ -1.54
CLDND1-208ENST00000503004 SERPINB4P48594 390 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 MNX1P50219 401 aaPredicted RBP5.42□□□□□ -1.54
CLDND1-208ENST00000503004 NCALDP61601 193 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 PSMC1P62191 440 aaKnown RBP5.42□□□□□ -1.54
CLDND1-208ENST00000503004 KRT17Q04695 432 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 DMPKQ09013 629 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 ZACNQ401N2 412 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 CMPK2Q5EBM0 449 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 C15orf39Q6ZRI6 1047 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 SESTD1Q86VW0 696 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 SCUBE1Q8IWY4 988 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 MCOLN2Q8IZK6 566 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 ANKRD35Q8N283 1001 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 TRPM4Q8TD43 1214 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 ABTB1Q969K4 478 aaPredicted RBP5.42□□□□□ -1.54
CLDND1-208ENST00000503004 PPP2R3CQ969Q6 453 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 FAM136AQ96C01 138 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 ZNF668Q96K58 619 aaPredicted RBP5.42□□□□□ -1.54
CLDND1-208ENST00000503004 SNX27Q96L92 541 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 ANKRD27Q96NW4 1050 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 UCN2Q96RP3 112 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 SELENOSQ9BQE4 189 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 DDX23Q9BUQ8 820 aaKnown RBP5.42□□□□□ -1.54
CLDND1-208ENST00000503004 CCDC113Q9H0I3 377 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 R3HDMLQ9H3Y0 253 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 AZI2Q9H6S1 392 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 ACAD9Q9H845 621 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 PFDN4Q9NQP4 134 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 KLHL11Q9NVR0 708 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 ARHGEF38Q9NXL2 777 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 RBAKQ9NYW8 714 aaPredicted RBP5.42□□□□□ -1.54
CLDND1-208ENST00000503004 PRKAG2Q9UGJ0 569 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 MTUS1Q9ULD2 1270 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 WDR81Q562E7 1941 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 SPATA31C2B4DYI2 1134 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 K7ERI5 159 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 PODXLO00592 558 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 MAGEB3O15480 346 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 RIPK2O43353 540 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 EXTL3O43909 919 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 C4BPAP04003 597 aaKnown RBP5.42□□□□□ -1.54
CLDND1-208ENST00000503004 NUDT17P0C025 328 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 SUPT20HL2P0C7V6 817 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 RALAP11233 206 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 CHN1P15882 459 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 TCF4P15884 667 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 HSPA6P17066 643 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 CHKAP35790 457 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 TNFSF9P41273 254 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 DRG2P55039 364 aaKnown RBP5.42□□□□□ -1.54
CLDND1-208ENST00000503004 STRN3Q13033 797 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 LONRF1Q17RB8 773 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 PLEKHG6Q3KR16 790 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 SUPT20HL1Q3ZLR7 823 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 ATP13A4Q4VNC1 1196 aa5.42□□□□□ -1.54
CLDND1-208ENST00000503004 XKR3Q5GH77 459 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms