RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 DHX35Q9H5Z1 703 aaKnown RBP17.94■□□□□ 0.46
HMGXB3-201ENST00000502717 ZC3H11AO75152 810 aaKnown RBP eCLIP17.93■□□□□ 0.461e-6■■■■■ 33.1
HMGXB3-201ENST00000502717 GLRA3O75311 464 aa17.93■□□□□ 0.46
HMGXB3-201ENST00000502717 S100BP04271 92 aaPredicted RBP17.93■□□□□ 0.46
HMGXB3-201ENST00000502717 GDPD5Q8WTR4 605 aa17.93■□□□□ 0.46
HMGXB3-201ENST00000502717 SIKE1Q9BRV8 207 aa17.93■□□□□ 0.46
HMGXB3-201ENST00000502717 SHCBP1LQ9BZQ2 653 aa17.93■□□□□ 0.46
HMGXB3-201ENST00000502717 EML4Q9HC35 981 aaKnown RBP17.93■□□□□ 0.46
HMGXB3-201ENST00000502717 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.93■□□□□ 0.46
HMGXB3-201ENST00000502717 GPR75-ASB3A0A0A6YYF3 556 aa17.93■□□□□ 0.46
HMGXB3-201ENST00000502717 SPRP35270 261 aaPredicted RBP17.93■□□□□ 0.46
HMGXB3-201ENST00000502717 NCOA4Q13772 614 aa17.93■□□□□ 0.46
HMGXB3-201ENST00000502717 CWF19L1Q69YN2 538 aaKnown RBP17.93■□□□□ 0.46
HMGXB3-201ENST00000502717 MFSD5Q6N075 450 aa17.93■□□□□ 0.46
HMGXB3-201ENST00000502717 TTC8Q8TAM2 541 aa17.93■□□□□ 0.46
HMGXB3-201ENST00000502717 CDYLQ9Y232 598 aa17.93■□□□□ 0.46
HMGXB3-201ENST00000502717 FAM58BPP0C7Q3 252 aa17.93■□□□□ 0.46
HMGXB3-201ENST00000502717 MFSD14CQ5VZR4 134 aa17.93■□□□□ 0.46
HMGXB3-201ENST00000502717 HGSNATQ68CP4 663 aa17.93■□□□□ 0.46
HMGXB3-201ENST00000502717 IYDQ6PHW0 289 aa17.93■□□□□ 0.46
HMGXB3-201ENST00000502717 IRF2BP2Q7Z5L9 587 aa17.93■□□□□ 0.46
HMGXB3-201ENST00000502717 SLC47A2Q86VL8 602 aa17.93■□□□□ 0.46
HMGXB3-201ENST00000502717 TNFRSF25Q93038 417 aa17.93■□□□□ 0.46
HMGXB3-201ENST00000502717 TLCD1Q96CP7 247 aa17.93■□□□□ 0.46
HMGXB3-201ENST00000502717 WRNIP1Q96S55 665 aa17.93■□□□□ 0.46
HMGXB3-201ENST00000502717 C10orf88Q9H8K7 445 aa17.93■□□□□ 0.46
HMGXB3-201ENST00000502717 E2F6O75461 281 aa17.93■□□□□ 0.46
HMGXB3-201ENST00000502717 TNFAIP8O95379 198 aa17.93■□□□□ 0.46
HMGXB3-201ENST00000502717 GTF2H1P32780 548 aa17.93■□□□□ 0.46
HMGXB3-201ENST00000502717 CLEC16AQ2KHT3 1053 aa17.93■□□□□ 0.46
HMGXB3-201ENST00000502717 FASTKD1Q53R41 847 aaKnown RBP17.93■□□□□ 0.46
HMGXB3-201ENST00000502717 TTC33Q6PID6 262 aaPredicted RBP17.93■□□□□ 0.46
HMGXB3-201ENST00000502717 SIX6OS1Q8N1H7 587 aa17.93■□□□□ 0.46
HMGXB3-201ENST00000502717 MED15Q96RN5 788 aa17.93■□□□□ 0.46
HMGXB3-201ENST00000502717 ZNF229Q9UJW7 825 aa17.93■□□□□ 0.46
HMGXB3-201ENST00000502717 BCL9O00512 1426 aa17.92■□□□□ 0.46
HMGXB3-201ENST00000502717 HSPA1AP0DMV8 641 aaKnown RBP17.92■□□□□ 0.46
HMGXB3-201ENST00000502717 HSPA1BP0DMV9 641 aaKnown RBP17.92■□□□□ 0.46
HMGXB3-201ENST00000502717 NUP107P57740 925 aa17.92■□□□□ 0.46
HMGXB3-201ENST00000502717 SWSAP1Q6NVH7 229 aa17.92■□□□□ 0.46
HMGXB3-201ENST00000502717 MAB21L3Q8N8X9 362 aa17.92■□□□□ 0.46
HMGXB3-201ENST00000502717 PI4K2AQ9BTU6 479 aa17.92■□□□□ 0.46
HMGXB3-201ENST00000502717 IL17RBQ9NRM6 502 aa17.92■□□□□ 0.46
HMGXB3-201ENST00000502717 HOXC10Q9NYD6 342 aa17.92■□□□□ 0.46
HMGXB3-201ENST00000502717 DGAT1O75907 488 aa17.92■□□□□ 0.46
HMGXB3-201ENST00000502717 POU5F1BQ06416 359 aa17.92■□□□□ 0.46
HMGXB3-201ENST00000502717 PRUNE1Q86TP1 453 aa17.92■□□□□ 0.46
HMGXB3-201ENST00000502717 ZNF483Q8TF39 744 aaPredicted RBP17.92■□□□□ 0.46
HMGXB3-201ENST00000502717 LRRC19Q9H756 370 aa17.92■□□□□ 0.46
HMGXB3-201ENST00000502717 ABHD2P08910 425 aa17.92■□□□□ 0.46
HMGXB3-201ENST00000502717 PPIDQ08752 370 aaKnown RBP17.92■□□□□ 0.46
HMGXB3-201ENST00000502717 LBRQ14739 615 aaKnown RBP17.92■□□□□ 0.46
HMGXB3-201ENST00000502717 KCNK18Q7Z418 384 aa17.92■□□□□ 0.46
HMGXB3-201ENST00000502717 RYBPQ8N488 228 aaPredicted RBP17.92■□□□□ 0.46
HMGXB3-201ENST00000502717 RAET1EQ8TD07 263 aa17.92■□□□□ 0.46
HMGXB3-201ENST00000502717 APOPT1Q96IL0 206 aa17.92■□□□□ 0.46
HMGXB3-201ENST00000502717 PPP1R36Q96LQ0 422 aa17.92■□□□□ 0.46
HMGXB3-201ENST00000502717 ADRA1DP25100 572 aa17.92■□□□□ 0.46
HMGXB3-201ENST00000502717 GCLCP48506 637 aaPredicted RBP17.92■□□□□ 0.46
HMGXB3-201ENST00000502717 INPP1P49441 399 aa17.92■□□□□ 0.46
HMGXB3-201ENST00000502717 ARHGDIAP52565 204 aa17.92■□□□□ 0.46
HMGXB3-201ENST00000502717 SLC12A1Q13621 1099 aa17.92■□□□□ 0.46
HMGXB3-201ENST00000502717 STRIP1Q5VSL9 837 aa17.92■□□□□ 0.46
HMGXB3-201ENST00000502717 ITPRIPL1Q6GPH6 555 aa17.92■□□□□ 0.46
HMGXB3-201ENST00000502717 MARK2Q7KZI7 788 aaKnown RBP17.92■□□□□ 0.46
HMGXB3-201ENST00000502717 ATXN7L3BQ96GX2 97 aa17.92■□□□□ 0.46
HMGXB3-201ENST00000502717 TMEM109Q9BVC6 243 aa17.92■□□□□ 0.46
HMGXB3-201ENST00000502717 DCDC2Q9UHG0 476 aa17.92■□□□□ 0.46
HMGXB3-201ENST00000502717 SMIM31A0A1B0GVY4 71 aa17.91■□□□□ 0.46
HMGXB3-201ENST00000502717 NDUFB10O96000 172 aa17.91■□□□□ 0.46
HMGXB3-201ENST00000502717 PDGFRAP16234 1089 aa17.91■□□□□ 0.46
HMGXB3-201ENST00000502717 GRK2P25098 689 aa17.91■□□□□ 0.46
HMGXB3-201ENST00000502717 RPA3P35244 121 aaPredicted RBP17.91■□□□□ 0.46
HMGXB3-201ENST00000502717 ATXN3P54252 364 aaPredicted RBP17.91■□□□□ 0.46
HMGXB3-201ENST00000502717 OASLQ15646 514 aaKnown RBP17.91■□□□□ 0.46
HMGXB3-201ENST00000502717 SPOCD1Q6ZMY3 1216 aa17.91■□□□□ 0.46
HMGXB3-201ENST00000502717 BNC2Q6ZN30 1099 aaPredicted RBP17.91■□□□□ 0.46
HMGXB3-201ENST00000502717 MRPL4Q9BYD3 311 aaKnown RBP17.91■□□□□ 0.46
HMGXB3-201ENST00000502717 ATRNO75882 1429 aa17.91■□□□□ 0.46
HMGXB3-201ENST00000502717 TCN1P20061 433 aaPredicted RBP17.91■□□□□ 0.46
HMGXB3-201ENST00000502717 ACOT2P49753 483 aa17.91■□□□□ 0.46
HMGXB3-201ENST00000502717 VCPP55072 806 aaKnown RBP17.91■□□□□ 0.46
HMGXB3-201ENST00000502717 YWHAHQ04917 246 aaPredicted RBP17.91■□□□□ 0.46
HMGXB3-201ENST00000502717 ARMCX2Q7L311 632 aa17.91■□□□□ 0.46
HMGXB3-201ENST00000502717 NET1Q7Z628 596 aaPredicted RBP17.91■□□□□ 0.46
HMGXB3-201ENST00000502717 PCYOX1LQ8NBM8 494 aa17.91■□□□□ 0.46
HMGXB3-201ENST00000502717 DNAJC16Q9Y2G8 782 aa17.91■□□□□ 0.46
HMGXB3-201ENST00000502717 WNT7AO00755 349 aa17.91■□□□□ 0.46
HMGXB3-201ENST00000502717 ADARP55265 1226 aaKnown RBP17.91■□□□□ 0.46
HMGXB3-201ENST00000502717 Q4G0T1 1027 aa17.91■□□□□ 0.46
HMGXB3-201ENST00000502717 HHIPL2Q6UWX4 724 aa17.91■□□□□ 0.46
HMGXB3-201ENST00000502717 KIAA2013Q8IYS2 634 aa17.91■□□□□ 0.46
HMGXB3-201ENST00000502717 SLC25A41Q8N5S1 370 aa17.91■□□□□ 0.46
HMGXB3-201ENST00000502717 TMEM121Q9BTD3 319 aa17.91■□□□□ 0.46
HMGXB3-201ENST00000502717 UNC45AQ9H3U1 944 aa17.91■□□□□ 0.46
HMGXB3-201ENST00000502717 CHST7Q9NS84 486 aa17.91■□□□□ 0.46
HMGXB3-201ENST00000502717 SLC12A6Q9UHW9 1150 aa17.91■□□□□ 0.46
HMGXB3-201ENST00000502717 BLOC1S6Q9UL45 172 aa17.91■□□□□ 0.46
HMGXB3-201ENST00000502717 F5H423 210 aaPredicted RBP17.91■□□□□ 0.46
HMGXB3-201ENST00000502717 KRT36O76013 467 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms