RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 NR0B2Q15466 257 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 MMEL1Q495T6 779 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 CATSPEREQ5SY80 951 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 THEMIS2Q5TEJ8 643 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 SNX30Q5VWJ9 437 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 KLHDC10Q6PID8 442 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 PAQR3Q6TCH7 311 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 UNQ6494/PRO21346Q6UXR6 183 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 UNC5DQ6UXZ4 953 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 SSH2Q76I76 1423 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 BTN2A1Q7KYR7 527 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 KRT74Q7RTS7 529 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 HEATR3Q7Z4Q2 680 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 ANKARQ7Z5J8 1434 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 ERC1Q8IUD2 1116 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 RBM12BQ8IXT5 1001 aaKnown RBP4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 ARHGEF28Q8N1W1 1705 aaKnown RBP4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 GLIS1Q8NBF1 620 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 NSUN4Q96CB9 384 aaKnown RBP4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 IQCDQ96DY2 449 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 LRRC46Q96FV0 321 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 SNX22Q96L94 193 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 DMRTA2Q96SC8 542 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 SIN3AQ96ST3 1273 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 MYL10Q9BUA6 226 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 GPR63Q9BZJ6 419 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 OR10A4Q9H209 315 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 SEMA6BQ9H3T3 888 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 XAB2Q9HCS7 855 aaKnown RBP4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 SAYSD1Q9NPB0 183 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 TM7SF3Q9NS93 570 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 PNPOQ9NVS9 261 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 WDR35Q9P2L0 1181 aa4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 EIF2B4Q9UI10 523 aaKnown RBP4.76□□□□□ -1.65
HMGB1P21-201ENST00000502313 SPATA31A6Q5VVP1 1343 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 ZC3H12DA2A288 527 aaKnown RBP4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 NUDT19A8MXV4 375 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 SLC16A6O15403 523 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 SLC7A4O43246 635 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 SRGAP3O43295 1099 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 ASNA1O43681 348 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 PSPNO60542 156 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 MLYCDO95822 493 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 PRNPP04156 253 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 KRT1P04264 644 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 ITGA5P08648 1049 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 DBHP09172 617 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 GLI4P10075 376 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 TYRP14679 529 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 IL11P20809 199 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 FGFR4P22455 802 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 SDHAP31040 664 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 SSTR4P31391 388 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 ACSL1P33121 698 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 PNLIPRP1P54315 467 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 EPHA5P54756 1037 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 EFR3AQ14156 821 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 SPIDRQ14159 915 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 WTAPQ15007 396 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 RAB3GAP1Q15042 981 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 ADRM1Q16186 407 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 CTXN3Q4LDR2 81 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 KHDC1Q4VXA5 237 aaKnown RBP4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 ADGRF1Q5T601 910 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 GALNT17Q6IS24 598 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 KLHL17Q6TDP4 642 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 USP49Q70CQ1 688 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 BEND5Q7L4P6 421 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 SPRED2Q7Z698 418 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 SDCCAG8Q86SQ7 713 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 TTC7BQ86TV6 843 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 ZC3H18Q86VM9 953 aaKnown RBP4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 CCDC117Q8IWD4 279 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 FANCBQ8NB91 859 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 C3orf20Q8ND61 904 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 TTLL11Q8NHH1 800 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 ABHD4Q8TB40 342 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 MAML3Q96JK9 1138 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 IWS1Q96ST2 819 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 P2RX7Q99572 595 aaKnown RBP4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 VRK1Q99986 396 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 WNT8AQ9H1J5 351 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 RC3H2Q9HBD1 1191 aaKnown RBP4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 RXFP1Q9HBX9 757 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 TBC1D23Q9NUY8 699 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 SIT1Q9Y3P8 196 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 ASB1Q9Y576 335 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 PCDHA1Q9Y5I3 950 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 POLR3AO14802 1390 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 TRPM1Q7Z4N2 1603 aa4.75□□□□□ -1.65
HMGB1P21-201ENST00000502313 TULP4Q9NRJ4 1543 aa4.74□□□□□ -1.65
HMGB1P21-201ENST00000502313 TCRBV5S2A0A599 114 aa4.74□□□□□ -1.65
HMGB1P21-201ENST00000502313 PRAMEF22A3QJZ6 481 aa4.74□□□□□ -1.65
HMGB1P21-201ENST00000502313 FAM90A27PA6NNH2 459 aa4.74□□□□□ -1.65
HMGB1P21-201ENST00000502313 H0Y3Z8 333 aa4.74□□□□□ -1.65
HMGB1P21-201ENST00000502313 ERAL1O75616 437 aaKnown RBP4.74□□□□□ -1.65
HMGB1P21-201ENST00000502313 B3GALNT1O75752 331 aa4.74□□□□□ -1.65
HMGB1P21-201ENST00000502313 PRPF6O94906 941 aaKnown RBP4.74□□□□□ -1.65
HMGB1P21-201ENST00000502313 GOSR1O95249 250 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms