RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 BRD9Q9H8M2 597 aa19.66■□□□□ 0.74
HOXD11-202ENST00000498438 MAGEC2Q9UBF1 373 aaPredicted RBP19.66■□□□□ 0.74
HOXD11-202ENST00000498438 MAGED2Q9UNF1 606 aaPredicted RBP19.66■□□□□ 0.74
HOXD11-202ENST00000498438 MIA3Q5JRA6 1907 aa19.66■□□□□ 0.74
HOXD11-202ENST00000498438 TICRRQ7Z2Z1 1910 aa19.66■□□□□ 0.74
HOXD11-202ENST00000498438 HEPACAM2A8MVW5 462 aa19.65■□□□□ 0.74
HOXD11-202ENST00000498438 SMC2O95347 1197 aa19.65■□□□□ 0.74
HOXD11-202ENST00000498438 FAM163BP0C2L3 166 aa19.65■□□□□ 0.74
HOXD11-202ENST00000498438 RPL13P26373 211 aaKnown RBP19.65■□□□□ 0.74
HOXD11-202ENST00000498438 MAGEA11P43364 429 aa19.65■□□□□ 0.74
HOXD11-202ENST00000498438 VAMP7P51809 220 aa19.65■□□□□ 0.74
HOXD11-202ENST00000498438 CYP27A1Q02318 531 aa19.65■□□□□ 0.74
HOXD11-202ENST00000498438 PRKCQQ04759 706 aa19.65■□□□□ 0.74
HOXD11-202ENST00000498438 ADAM9Q13443 819 aa19.65■□□□□ 0.74
HOXD11-202ENST00000498438 MAPRE1Q15691 268 aaKnown RBP19.65■□□□□ 0.74
HOXD11-202ENST00000498438 ZACNQ401N2 412 aa19.65■□□□□ 0.74
HOXD11-202ENST00000498438 ZNF667Q5HYK9 610 aa19.65■□□□□ 0.74
HOXD11-202ENST00000498438 MDH1BQ5I0G3 518 aa19.65■□□□□ 0.74
HOXD11-202ENST00000498438 INTS8Q75QN2 995 aaKnown RBP19.65■□□□□ 0.74
HOXD11-202ENST00000498438 TMEM150AQ86TG1 271 aa19.65■□□□□ 0.74
HOXD11-202ENST00000498438 GPIHBP1Q8IV16 184 aa19.65■□□□□ 0.74
HOXD11-202ENST00000498438 ARID3BQ8IVW6 561 aaPredicted RBP19.65■□□□□ 0.74
HOXD11-202ENST00000498438 SCN4BQ8IWT1 228 aa19.65■□□□□ 0.74
HOXD11-202ENST00000498438 CCDC105Q8IYK2 499 aa19.65■□□□□ 0.74
HOXD11-202ENST00000498438 FAM186BQ8IYM0 893 aa19.65■□□□□ 0.74
HOXD11-202ENST00000498438 DNASE1L2Q92874 299 aa19.65■□□□□ 0.74
HOXD11-202ENST00000498438 E2F7Q96AV8 911 aa19.65■□□□□ 0.74
HOXD11-202ENST00000498438 DPEP3Q9H4B8 488 aa19.65■□□□□ 0.74
HOXD11-202ENST00000498438 TASP1Q9H6P5 420 aa19.65■□□□□ 0.74
HOXD11-202ENST00000498438 PCDHA5Q9Y5H7 936 aa19.65■□□□□ 0.74
HOXD11-202ENST00000498438 GREB1Q4ZG55 1949 aa19.64■□□□□ 0.74
HOXD11-202ENST00000498438 SLC38A8A6NNN8 435 aa19.64■□□□□ 0.73
HOXD11-202ENST00000498438 IKBKBO14920 756 aa19.64■□□□□ 0.73
HOXD11-202ENST00000498438 NOL4O94818 638 aa19.64■□□□□ 0.73
HOXD11-202ENST00000498438 TRIM49P0CI25 452 aa19.64■□□□□ 0.73
HOXD11-202ENST00000498438 TRIM49CP0CI26 452 aa19.64■□□□□ 0.73
HOXD11-202ENST00000498438 BDNFP23560 247 aa19.64■□□□□ 0.73
HOXD11-202ENST00000498438 GDI1P31150 447 aa19.64■□□□□ 0.73
HOXD11-202ENST00000498438 PIK3CAP42336 1068 aa19.64■□□□□ 0.73
HOXD11-202ENST00000498438 PRCPP42785 496 aa19.64■□□□□ 0.73
HOXD11-202ENST00000498438 RAP1GAPP47736 663 aa19.64■□□□□ 0.73
HOXD11-202ENST00000498438 NLRP12P59046 1061 aa19.64■□□□□ 0.73
HOXD11-202ENST00000498438 EDRF1Q3B7T1 1238 aa19.64■□□□□ 0.73
HOXD11-202ENST00000498438 ZNF658Q5TYW1 1059 aaPredicted RBP19.64■□□□□ 0.73
HOXD11-202ENST00000498438 TPRG1Q6ZUI0 275 aa19.64■□□□□ 0.73
HOXD11-202ENST00000498438 SV2AQ7L0J3 742 aa19.64■□□□□ 0.73
HOXD11-202ENST00000498438 MFSD6LQ8IWD5 586 aa19.64■□□□□ 0.73
HOXD11-202ENST00000498438 PJA1Q8NG27 643 aa19.64■□□□□ 0.73
HOXD11-202ENST00000498438 SPATA20Q8TB22 786 aa19.64■□□□□ 0.73
HOXD11-202ENST00000498438 MYCBPAPQ8TBZ2 947 aa19.64■□□□□ 0.73
HOXD11-202ENST00000498438 SMARCE1Q969G3 411 aa19.64■□□□□ 0.73
HOXD11-202ENST00000498438 PCED1BQ96HM7 432 aa19.64■□□□□ 0.73
HOXD11-202ENST00000498438 DDX23Q9BUQ8 820 aaKnown RBP19.64■□□□□ 0.73
HOXD11-202ENST00000498438 HEBP1Q9NRV9 189 aa19.64■□□□□ 0.73
HOXD11-202ENST00000498438 HOOK1Q9UJC3 728 aaKnown RBP19.64■□□□□ 0.73
HOXD11-202ENST00000498438 F5P12259 2224 aa19.64■□□□□ 0.73
HOXD11-202ENST00000498438 ZNF638Q14966 1978 aaKnown RBP19.63■□□□□ 0.73
HOXD11-202ENST00000498438 KANSL1LA0AUZ9 987 aa19.63■□□□□ 0.73
HOXD11-202ENST00000498438 A8MXQ7 604 aa19.63■□□□□ 0.73
HOXD11-202ENST00000498438 H0Y858 1186 aa19.63■□□□□ 0.73
HOXD11-202ENST00000498438 PRAMEF12O95522 483 aa19.63■□□□□ 0.73
HOXD11-202ENST00000498438 F11P03951 625 aa19.63■□□□□ 0.73
HOXD11-202ENST00000498438 DCNP07585 359 aaKnown RBP19.63■□□□□ 0.73
HOXD11-202ENST00000498438 KRT13P13646 458 aa19.63■□□□□ 0.73
HOXD11-202ENST00000498438 PSMC2P35998 433 aaKnown RBP19.63■□□□□ 0.73
HOXD11-202ENST00000498438 CDH8P55286 799 aa19.63■□□□□ 0.73
HOXD11-202ENST00000498438 VSTM1Q6UX27 236 aa19.63■□□□□ 0.73
HOXD11-202ENST00000498438 DTWD2Q8NBA8 298 aa19.63■□□□□ 0.73
HOXD11-202ENST00000498438 IRF7Q92985 503 aa19.63■□□□□ 0.73
HOXD11-202ENST00000498438 EEF2KMTQ96G04 330 aa19.63■□□□□ 0.73
HOXD11-202ENST00000498438 TRMT2BQ96GJ1 504 aaKnown RBP19.63■□□□□ 0.73
HOXD11-202ENST00000498438 UXTQ9UBK9 157 aaPredicted RBP19.63■□□□□ 0.73
HOXD11-202ENST00000498438 SIT1Q9Y3P8 196 aa19.63■□□□□ 0.73
HOXD11-202ENST00000498438 DPYSL4O14531 572 aa19.62■□□□□ 0.73
HOXD11-202ENST00000498438 ZNF263O14978 683 aa19.62■□□□□ 0.73
HOXD11-202ENST00000498438 KINO60870 393 aaKnown RBP19.62■□□□□ 0.73
HOXD11-202ENST00000498438 GADD45BO75293 160 aaPredicted RBP19.62■□□□□ 0.73
HOXD11-202ENST00000498438 TADA3O75528 432 aa19.62■□□□□ 0.73
HOXD11-202ENST00000498438 HLA-DRAP01903 254 aa19.62■□□□□ 0.73
HOXD11-202ENST00000498438 PTPN1P18031 435 aaKnown RBP19.62■□□□□ 0.73
HOXD11-202ENST00000498438 CD72P21854 359 aa19.62■□□□□ 0.73
HOXD11-202ENST00000498438 WEE1P30291 646 aa19.62■□□□□ 0.73
HOXD11-202ENST00000498438 GCLMP48507 274 aa19.62■□□□□ 0.73
HOXD11-202ENST00000498438 PPP3CAQ08209 521 aa19.62■□□□□ 0.73
HOXD11-202ENST00000498438 SGSM1Q2NKQ1 1148 aa19.62■□□□□ 0.73
HOXD11-202ENST00000498438 COBLL1Q53SF7 1204 aa19.62■□□□□ 0.73
HOXD11-202ENST00000498438 YAF2Q8IY57 180 aa19.62■□□□□ 0.73
HOXD11-202ENST00000498438 B3GALNT2Q8NCR0 500 aa19.62■□□□□ 0.73
HOXD11-202ENST00000498438 MYRFLQ96LU7 910 aa19.62■□□□□ 0.73
HOXD11-202ENST00000498438 SLC46A2Q9BY10 475 aa19.62■□□□□ 0.73
HOXD11-202ENST00000498438 SMG9Q9H0W8 520 aaKnown RBP19.62■□□□□ 0.73
HOXD11-202ENST00000498438 SDCBP2Q9H190 292 aa19.62■□□□□ 0.73
HOXD11-202ENST00000498438 FAM86C1Q9NVL1 165 aa19.62■□□□□ 0.73
HOXD11-202ENST00000498438 ZMYM5Q9UJ78 669 aa19.62■□□□□ 0.73
HOXD11-202ENST00000498438 LRRN2O75325 713 aa19.61■□□□□ 0.73
HOXD11-202ENST00000498438 ASS1P00966 412 aaKnown RBP19.61■□□□□ 0.73
HOXD11-202ENST00000498438 P4HA1P13674 534 aa19.61■□□□□ 0.73
HOXD11-202ENST00000498438 DDX6P26196 483 aaKnown RBP eCLIP19.61■□□□□ 0.73
HOXD11-202ENST00000498438 GRIK1P39086 918 aa19.61■□□□□ 0.73
HOXD11-202ENST00000498438 ENPEPQ07075 957 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms