RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 CDH9Q9ULB4 789 aa9.08□□□□□ -0.96
HMGXB4-207ENST00000498212 MAGED2Q9UNF1 606 aaPredicted RBP9.08□□□□□ -0.96
HMGXB4-207ENST00000498212 MYO16Q9Y6X6 1858 aa9.08□□□□□ -0.96
HMGXB4-207ENST00000498212 FAM237AA0A1B0GTK4 181 aa9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 A0A1W2PQ27 194 aa9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 A0A1W2PQ64 194 aa9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 A0A1W2PQD8 194 aa9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 MYBPHLA2RUH7 354 aa9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 PRR23AA6NEV1 266 aa9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 SHISA7A6NL88 538 aa9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 ARNTLO00327 626 aa9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 LAMTOR5O43504 91 aa9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 PHACTR2O75167 634 aa9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 ATP2C2O75185 946 aa9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 PRAMEF12O95522 483 aa9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 F11P03951 625 aa9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 PDGFRBP09619 1106 aa9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 HMGA1P17096 107 aaKnown RBP9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 WARSP23381 471 aaKnown RBP9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 LMO2P25791 158 aa9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 WEE1P30291 646 aa9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 RPS9P46781 194 aaKnown RBP9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 NLRP12P59046 1061 aa9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 PSMC1P62191 440 aaKnown RBP9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 TRPC3Q13507 836 aa9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 BECN1Q14457 450 aa9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 DDR2Q16832 855 aa9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 CCDC142Q17RM4 750 aa9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 ARHGAP29Q52LW3 1261 aa9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 SDHAF4Q5VUM1 108 aa9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 FAM171BQ6P995 826 aa9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 C4orf50Q6ZRC1 276 aa9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 ASCL5Q7RTU5 278 aa9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 TMEM150AQ86TG1 271 aa9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 SLC9A9Q8IVB4 645 aa9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 SCN4BQ8IWT1 228 aa9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 STKLD1Q8NE28 680 aa9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 BPIFB1Q8TDL5 484 aa9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 FAM3CQ92520 227 aa9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 ZNF516Q92618 1163 aa9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 CCDC47Q96A33 483 aaKnown RBP9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 SYAP1Q96A49 352 aaPredicted RBP9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 CLDN23Q96B33 292 aa9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 SLC46A2Q9BY10 475 aa9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 SNX25Q9H3E2 840 aa9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 KCTD10Q9H3F6 313 aa9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 SPATA6Q9NWH7 488 aaPredicted RBP9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 UXTQ9UBK9 157 aaPredicted RBP9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 NDRG2Q9UN36 371 aaKnown RBP9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 PIAS3Q9Y6X2 628 aa9.07□□□□□ -0.96
HMGXB4-207ENST00000498212 KIAA1549LQ6ZVL6 1849 aa9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 SLC38A8A6NNN8 435 aa9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 SOBPA7XYQ1 873 aa9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 PDXKO00764 312 aa9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 CALUO43852 315 aaPredicted RBP9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 TACC1O75410 805 aa9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 NOL4O94818 638 aa9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 RHOBTB3O94955 611 aa9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 KIF20AO95235 890 aa9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 STAU1O95793 577 aaKnown RBP9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 NR3C1P04150 777 aa9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 FAM163BP0C2L3 166 aa9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 SP9P0CG40 484 aa9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 CCNE1P24864 410 aa9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 DDX6P26196 483 aaKnown RBP eCLIP9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 ATICP31939 592 aa9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 GNL1P36915 607 aaPredicted RBP9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 AVPR1AP37288 418 aa9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 MAGEA11P43364 429 aa9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 CASP4P49662 377 aa9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 KPNA1P52294 538 aaPredicted RBP9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 AP3M2P53677 418 aa9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 MLLT6P55198 1093 aaPredicted RBP9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 MYL6P60660 151 aa9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 CYP27A1Q02318 531 aa9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 FZD5Q13467 585 aa9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 BIRC3Q13489 604 aa9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 WDR72Q3MJ13 1102 aa9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 C1orf228Q6PIY5 440 aa9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 ZC3H14Q6PJT7 736 aaKnown RBP9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 VSTM1Q6UX27 236 aa9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 KRBA2Q6ZNG9 492 aa9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 CMTM8Q8IZV2 173 aa9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 CELF5Q8N6W0 485 aaKnown RBP9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 MAB21L3Q8N8X9 362 aa9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 FSIP1Q8NA03 581 aa9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 OR6B3Q8NGW1 331 aa9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 PLEKHO2Q8TD55 490 aa9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 PARD3BQ8TEW8 1205 aa9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 TMEM174Q8WUU8 243 aa9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 MRPS31Q92665 395 aaKnown RBP9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 MYLPFQ96A32 169 aa9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 TRMT2BQ96GJ1 504 aaKnown RBP9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 MSANTD3Q96H12 275 aa9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 ZFYVE19Q96K21 471 aa9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 LRRC3BQ96PB8 259 aa9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 SMG9Q9H0W8 520 aaKnown RBP9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 GZF1Q9H116 711 aaPredicted RBP9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 GOLPH3LQ9H4A5 285 aa9.06□□□□□ -0.96
HMGXB4-207ENST00000498212 GDPD2Q9HCC8 539 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms