RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 KIAA0319LQ8IZA0 1049 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 ANKRD35Q8N283 1001 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 PCDH19Q8TAB3 1148 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 RNF141Q8WVD5 230 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 HDAC2Q92769 488 aaKnown RBP6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 ZBTB10Q96DT7 871 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 MVB12AQ96EY5 273 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 TOX2Q96NM4 488 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 IWS1Q96ST2 819 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 LZTS2Q9BRK4 669 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 AMNQ9BXJ7 453 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 LRRC27Q9C0I9 530 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 ALDH8A1Q9H2A2 487 aaPredicted RBP6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 BHMT2Q9H2M3 363 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 NOL6Q9H6R4 1146 aaKnown RBP6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 TOPORSQ9NS56 1045 aaPredicted RBP6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 TBC1D22BQ9NU19 505 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 GPRC5BQ9NZH0 403 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 FBXL21Q9UKT6 434 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 VAV3Q9UKW4 847 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 FAM184BQ9ULE4 1060 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 PADI4Q9UM07 663 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 L1RE1Q9UN81 338 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 GPR55Q9Y2T6 319 aaPredicted RBP6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 CTDP1Q9Y5B0 961 aaPredicted RBP6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 FAM170AA1A519 330 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 ERICH2A1L162 156 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 KBTBD13C9JR72 458 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 IFIT3O14879 490 aaKnown RBP6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 TGM5O43548 720 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 B3GALT2O43825 422 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 CABYRO75952 493 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 REC8O95072 547 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 CAPN3P20807 821 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 KIF5BP33176 963 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 PRIM2P49643 509 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 GNAQP50148 359 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 CDK7P50613 346 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 CLCN7P51798 805 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 MPP1Q00013 466 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 PRKCQQ04759 706 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 IKQ13123 557 aaPredicted RBP6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 LRRC26Q2I0M4 334 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 ADCK5Q3MIX3 580 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 DUSP28Q4G0W2 176 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 C1QTNF12Q5T7M4 302 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 IZUMO3Q5VZ72 239 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 PGBD2Q6P3X8 592 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 CCDC62Q6P9F0 684 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 APOA5Q6Q788 366 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 SLC30A10Q6XR72 485 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 RNF207Q6ZRF8 634 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 GET4Q7L5D6 327 aaPredicted RBP6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 VSIG10LQ86VR7 867 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 PLD6Q8N2A8 252 aaKnown RBP6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 MFSD4AQ8N468 514 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 TTC30BQ8N4P2 665 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 FIBCD1Q8N539 461 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 ZNF713Q8N859 430 aaPredicted RBP6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 PPP1R35Q8TAP8 253 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 PIWIL2Q8TC59 973 aaKnown RBP6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 NUP133Q8WUM0 1156 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 USP13Q92995 863 aaPredicted RBP6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 ARL8AQ96BM9 186 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 FBXL18Q96ME1 805 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 ACAP3Q96P50 834 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 APOL5Q9BWW9 433 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 ASPNQ9BXN1 380 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 SLC26A6Q9BXS9 759 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 XPNPEP3Q9NQH7 507 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 PRR13Q9NZ81 148 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 H2AFY2Q9P0M6 372 aaPredicted RBP6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 CCDC39Q9UFE4 941 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 PLAGL2Q9UPG8 496 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 MRPL11Q9Y3B7 192 aaKnown RBP6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 U3KQE9 123 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 TTC3P53804 2025 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 TRANK1O15050 2925 aa6.53□□□□□ -1.36
TMEM39A-212ENST00000497993 MROH7Q68CQ1 1323 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 NLRC5Q86WI3 1866 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 A0A087WV62 115 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 A0A1W2PQ45 241 aaPredicted RBP6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 A0A1W2PQY0 241 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 CCDC66A2RUB6 948 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 B4DLN1 442 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 H0YGN5 161 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 KIAA0355O15063 1070 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 STAM2O75886 525 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 UBXN7O94888 489 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 CBX7O95931 251 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 WNT11O96014 354 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 PYGLP06737 847 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 GOLGA8HP0CJ92 632 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 ABCB4P21439 1286 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 TNFSF4P23510 183 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 TECP42680 631 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 DNM2P50570 870 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 MRPL12P52815 198 aaKnown RBP6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 BAATQ14032 418 aaPredicted RBP6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 ZNF174Q15697 407 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms