RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 COL22A1Q8NFW1 1626 aaPredicted RBP2.11□□□□□ -2.07
UBR4-217ENST00000497018 A0A087WWL8 130 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 A0A1W2PR48 441 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 CCDC78A2IDD5 438 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 VWA3AA6NCI4 1184 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 OR2W5A6NFC9 320 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 PRSS29PA6NIE9 313 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 FAM90A20PA6NIJ5 464 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 C1QTNF9BB2RNN3 333 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 C22orf46C9J442 243 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 F2RL2O00254 374 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 BTN3A1O00481 513 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 FCHO1O14526 889 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 CLGNO14967 610 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 SLC27A2O14975 620 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 GAS2O43903 313 aaKnown RBP2.11□□□□□ -2.07
UBR4-217ENST00000497018 SRGAP2O75044 1071 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 TBX10O75333 385 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 LEFTY1O75610 366 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 PCDH8O95206 1070 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 GLP2RO95838 553 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 SLC4A1P02730 911 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 AHSGP02765 367 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 RPLP2P05387 115 aaKnown RBP2.11□□□□□ -2.07
UBR4-217ENST00000497018 QDPRP09417 244 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 CKBP12277 381 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 SCG2P13521 617 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 PECAM1P16284 738 aaPredicted RBP2.11□□□□□ -2.07
UBR4-217ENST00000497018 IFNAR1P17181 557 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 HDCP19113 662 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 RXRAP19793 462 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 RAB6AP20340 208 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 TBXAS1P24557 533 aaPredicted RBP2.11□□□□□ -2.07
UBR4-217ENST00000497018 PSMA4P25789 261 aaKnown RBP2.11□□□□□ -2.07
UBR4-217ENST00000497018 KLRC1P26715 233 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 MST1P26927 711 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 EPHA8P29322 1005 aaPredicted RBP2.11□□□□□ -2.07
UBR4-217ENST00000497018 ATP5DP30049 168 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 CIITAP33076 1130 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 KIF5BP33176 963 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 NNMTP40261 264 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 HADHAP40939 763 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 HNF4AP41235 474 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 DPP6P42658 865 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 PHKA1P46020 1223 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 SLC6A11P48066 632 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 ALDH3A2P51648 485 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 RAD23AP54725 363 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 MLLT6P55198 1093 aaPredicted RBP2.11□□□□□ -2.07
UBR4-217ENST00000497018 HSD17B7P56937 341 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 SOX8P57073 446 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 PSMC6P62333 389 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 TMF1P82094 1093 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 RBP5P82980 135 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 PPARDQ03181 441 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 ROM1Q03395 351 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 EXOSC9Q06265 439 aaKnown RBP2.11□□□□□ -2.07
UBR4-217ENST00000497018 DDR1Q08345 913 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 SCAPQ12770 1279 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 TFCP2Q12800 502 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 TRIM28Q13263 835 aaKnown RBP2.11□□□□□ -2.07
UBR4-217ENST00000497018 CDK5R2Q13319 367 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 PUM1Q14671 1186 aaKnown RBP eCLIP2.11□□□□□ -2.07
UBR4-217ENST00000497018 ADIPOQQ15848 244 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 SLC5A9Q2M3M2 681 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 SETMARQ53H47 684 aaPredicted RBP2.11□□□□□ -2.07
UBR4-217ENST00000497018 PRRT3Q5FWE3 981 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 KHDC1LQ5JSQ8 128 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 C1orf141Q5JVX7 400 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 ANKRD45Q5TZF3 282 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 RRAGBQ5VZM2 374 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 BTBD8Q5XKL5 378 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 RAP1GAP2Q684P5 730 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 GALNT17Q6IS24 598 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 CDPF1Q6NVV7 123 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 INO80CQ6PI98 192 aaPredicted RBP2.11□□□□□ -2.07
UBR4-217ENST00000497018 DCLRE1AQ6PJP8 1040 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 USP17L6PQ6QN14 398 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 SLC22A25Q6T423 547 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 RNF111Q6ZNA4 994 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 C1orf229Q6ZS94 237 aaPredicted RBP2.11□□□□□ -2.07
UBR4-217ENST00000497018 EP400NLQ6ZTU2 488 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 Q6ZVL8 140 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 MCM10Q7L590 875 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 SLFN11Q7Z7L1 901 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 SDCCAG8Q86SQ7 713 aaPredicted RBP2.11□□□□□ -2.07
UBR4-217ENST00000497018 TTC30AQ86WT1 665 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 FBXO11Q86XK2 927 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 ANKRD13BQ86YJ7 626 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 WFDC3Q8IUB2 231 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 ARMC8Q8IUR7 673 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 CEP97Q8IW35 865 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 RHOT1Q8IXI2 618 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 DIS3L2Q8IYB7 885 aaKnown RBP2.11□□□□□ -2.07
UBR4-217ENST00000497018 OR8H3Q8N146 312 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 ZGPATQ8N5A5 531 aaKnown RBP2.11□□□□□ -2.07
UBR4-217ENST00000497018 Q8NFD4 153 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 GPR156Q8NFN8 814 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 TOR1AIP2Q8NFQ8 470 aa2.11□□□□□ -2.07
UBR4-217ENST00000497018 OR6B3Q8NGW1 331 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms