RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 CELF5Q8N6W0 485 aaKnown RBP6.71□□□□□ -1.34
MDM2-220ENST00000496959 ZIM2Q9NZV7 527 aa6.71□□□□□ -1.34
MDM2-220ENST00000496959 GABBR1Q9UBS5 961 aa6.71□□□□□ -1.34
MDM2-220ENST00000496959 SERTAD3Q9UJW9 196 aa6.71□□□□□ -1.34
MDM2-220ENST00000496959 PRKCGP05129 697 aa6.7□□□□□ -1.34
MDM2-220ENST00000496959 HNRNPCP07910 306 aaKnown RBP eCLIP6.7□□□□□ -1.343e-7■■■■□ 20.8
MDM2-220ENST00000496959 CYP2C9P11712 490 aa6.7□□□□□ -1.34
MDM2-220ENST00000496959 XRCC6P12956 609 aaKnown RBP eCLIP6.7□□□□□ -1.344e-12■□□□□ 9.3
MDM2-220ENST00000496959 LMO1P25800 156 aa6.7□□□□□ -1.34
MDM2-220ENST00000496959 LRPAP1P30533 357 aa6.7□□□□□ -1.34
MDM2-220ENST00000496959 CEP85Q6P2H3 762 aa6.7□□□□□ -1.34
MDM2-220ENST00000496959 ANKRD16Q6P6B7 361 aa6.7□□□□□ -1.34
MDM2-220ENST00000496959 B3GNT9Q6UX72 402 aa6.7□□□□□ -1.34
MDM2-220ENST00000496959 WDR53Q7Z5U6 358 aaPredicted RBP6.7□□□□□ -1.34
MDM2-220ENST00000496959 SRRM1Q8IYB3 904 aaKnown RBP6.7□□□□□ -1.34
MDM2-220ENST00000496959 MRGPRX1Q96LB2 322 aa6.7□□□□□ -1.34
MDM2-220ENST00000496959 ACO2Q99798 780 aaKnown RBP6.7□□□□□ -1.34
MDM2-220ENST00000496959 A0A1W2PPL8 197 aa6.69□□□□□ -1.34
MDM2-220ENST00000496959 MANSC4A6NHS7 340 aaPredicted RBP6.69□□□□□ -1.34
MDM2-220ENST00000496959 QSOX1O00391 747 aa6.69□□□□□ -1.34
MDM2-220ENST00000496959 U2AF1L5P0DN76 240 aaPredicted RBP6.69□□□□□ -1.34
MDM2-220ENST00000496959 JUPP14923 745 aa6.69□□□□□ -1.34
MDM2-220ENST00000496959 UCP3P55916 312 aa6.69□□□□□ -1.34
MDM2-220ENST00000496959 U2AF1Q01081 240 aaKnown RBP eCLIP6.69□□□□□ -1.346e-7■□□□□ 8.9
MDM2-220ENST00000496959 SRSF4Q08170 494 aaKnown RBP6.69□□□□□ -1.34
MDM2-220ENST00000496959 FOXF2Q12947 444 aa6.69□□□□□ -1.34
MDM2-220ENST00000496959 TREML2Q5T2D2 321 aa6.69□□□□□ -1.34
MDM2-220ENST00000496959 KIAA1614Q5VZ46 1190 aa6.69□□□□□ -1.34
MDM2-220ENST00000496959 RGS7BPQ6MZT1 257 aaPredicted RBP6.69□□□□□ -1.34
MDM2-220ENST00000496959 MAVSQ7Z434 540 aa6.69□□□□□ -1.34
MDM2-220ENST00000496959 TBC1D5Q92609 795 aa6.69□□□□□ -1.34
MDM2-220ENST00000496959 TAAR9Q96RI9 348 aa6.69□□□□□ -1.34
MDM2-220ENST00000496959 GLOD4Q9HC38 313 aa6.69□□□□□ -1.34
MDM2-220ENST00000496959 NDRG4Q9ULP0 352 aaKnown RBP6.69□□□□□ -1.34
MDM2-220ENST00000496959 SH2B3Q9UQQ2 575 aa6.69□□□□□ -1.34
MDM2-220ENST00000496959 SSX2IPQ9Y2D8 614 aa6.69□□□□□ -1.34
MDM2-220ENST00000496959 AOX1Q06278 1338 aa6.69□□□□□ -1.34
MDM2-220ENST00000496959 KAT6AQ92794 2004 aa6.68□□□□□ -1.34
MDM2-220ENST00000496959 TARM1B6A8C7 271 aa6.68□□□□□ -1.34
MDM2-220ENST00000496959 PCSK6P29122 969 aa6.68□□□□□ -1.34
MDM2-220ENST00000496959 SLC11A2P49281 568 aa6.68□□□□□ -1.34
MDM2-220ENST00000496959 GPSM2P81274 684 aa6.68□□□□□ -1.34
MDM2-220ENST00000496959 AARS2Q5JTZ9 985 aaKnown RBP6.68□□□□□ -1.34
MDM2-220ENST00000496959 ODR4Q5SWX8 454 aa6.68□□□□□ -1.34
MDM2-220ENST00000496959 LMBRD2Q68DH5 695 aaPredicted RBP6.68□□□□□ -1.34
MDM2-220ENST00000496959 ZNF783Q6ZMS7 281 aa6.68□□□□□ -1.34
MDM2-220ENST00000496959 EPM2AIP1Q7L775 607 aaPredicted RBP6.68□□□□□ -1.34
MDM2-220ENST00000496959 SLC29A4Q7RTT9 530 aa6.68□□□□□ -1.34
MDM2-220ENST00000496959 ZNF804AQ7Z570 1209 aa6.68□□□□□ -1.34
MDM2-220ENST00000496959 PPP1R35Q8TAP8 253 aa6.68□□□□□ -1.34
MDM2-220ENST00000496959 ATG4AQ8WYN0 398 aa6.68□□□□□ -1.34
MDM2-220ENST00000496959 P2RX7Q99572 595 aaKnown RBP6.68□□□□□ -1.34
MDM2-220ENST00000496959 SMARCA4P51532 1647 aa6.68□□□□□ -1.34
MDM2-220ENST00000496959 ATAD2BQ9ULI0 1458 aa6.67□□□□□ -1.34
MDM2-220ENST00000496959 LAMC3Q9Y6N6 1575 aa6.67□□□□□ -1.34
MDM2-220ENST00000496959 MARCH6O60337 910 aa6.67□□□□□ -1.34
MDM2-220ENST00000496959 CTNND1O60716 968 aaKnown RBP6.67□□□□□ -1.34
MDM2-220ENST00000496959 JTBO76095 146 aa6.67□□□□□ -1.34
MDM2-220ENST00000496959 CYP2C18P33260 490 aa6.67□□□□□ -1.34
MDM2-220ENST00000496959 LIPAP38571 399 aa6.67□□□□□ -1.34
MDM2-220ENST00000496959 CLCN2P51788 898 aa6.67□□□□□ -1.34
MDM2-220ENST00000496959 PDE1AP54750 535 aa6.67□□□□□ -1.34
MDM2-220ENST00000496959 WNT3P56703 355 aa6.67□□□□□ -1.34
MDM2-220ENST00000496959 EEFSECP57772 596 aaKnown RBP6.67□□□□□ -1.34
MDM2-220ENST00000496959 ANO6Q4KMQ2 910 aa6.67□□□□□ -1.34
MDM2-220ENST00000496959 LRRC71Q8N4P6 559 aa6.67□□□□□ -1.34
MDM2-220ENST00000496959 SLC15A4Q8N697 577 aa6.67□□□□□ -1.34
MDM2-220ENST00000496959 DNAJC5GQ8N7S2 189 aa6.67□□□□□ -1.34
MDM2-220ENST00000496959 FANCBQ8NB91 859 aa6.67□□□□□ -1.34
MDM2-220ENST00000496959 OR6B3Q8NGW1 331 aa6.67□□□□□ -1.34
MDM2-220ENST00000496959 KBTBD7Q8WVZ9 684 aa6.67□□□□□ -1.34
MDM2-220ENST00000496959 H0YIZ8 118 aa6.66□□□□□ -1.34
MDM2-220ENST00000496959 PHGDHO43175 533 aaKnown RBP6.66□□□□□ -1.34
MDM2-220ENST00000496959 IL6RP08887 468 aaPredicted RBP6.66□□□□□ -1.34
MDM2-220ENST00000496959 ABCG1P45844 678 aa6.66□□□□□ -1.34
MDM2-220ENST00000496959 SP2Q02086 613 aa6.66□□□□□ -1.34
MDM2-220ENST00000496959 KRT17Q04695 432 aa6.66□□□□□ -1.34
MDM2-220ENST00000496959 SLC10A2Q12908 348 aaPredicted RBP6.66□□□□□ -1.34
MDM2-220ENST00000496959 MGAT5BQ3V5L5 792 aa6.66□□□□□ -1.34
MDM2-220ENST00000496959 ZBTB34Q8NCN2 500 aa6.66□□□□□ -1.34
MDM2-220ENST00000496959 SEMA6DQ8NFY4 1073 aa6.66□□□□□ -1.34
MDM2-220ENST00000496959 GLG1Q92896 1179 aa6.66□□□□□ -1.34
MDM2-220ENST00000496959 TRIM54Q9BYV2 358 aa6.66□□□□□ -1.34
MDM2-220ENST00000496959 ANLNQ9NQW6 1124 aa6.66□□□□□ -1.34
MDM2-220ENST00000496959 ZSCAN32Q9NX65 697 aa6.66□□□□□ -1.34
MDM2-220ENST00000496959 DLL3Q9NYJ7 618 aa6.66□□□□□ -1.34
MDM2-220ENST00000496959 SH3BP4Q9P0V3 963 aa6.66□□□□□ -1.34
MDM2-220ENST00000496959 ARHGEF17Q96PE2 2063 aaPredicted RBP6.65□□□□□ -1.34
MDM2-220ENST00000496959 THOC2Q8NI27 1593 aaKnown RBP6.65□□□□□ -1.34
MDM2-220ENST00000496959 BAZ1AQ9NRL2 1556 aaPredicted RBP6.65□□□□□ -1.34
MDM2-220ENST00000496959 A1L4Q6 167 aa6.65□□□□□ -1.34
MDM2-220ENST00000496959 WIPF3A6NGB9 483 aa6.65□□□□□ -1.34
MDM2-220ENST00000496959 LINC01548A6NM66 108 aa6.65□□□□□ -1.34
MDM2-220ENST00000496959 hCG_1984214I3L0E3 225 aa6.65□□□□□ -1.34
MDM2-220ENST00000496959 BTN3A1O00481 513 aa6.65□□□□□ -1.34
MDM2-220ENST00000496959 TBC1D4O60343 1298 aa6.65□□□□□ -1.34
MDM2-220ENST00000496959 TUSC2O75896 110 aa6.65□□□□□ -1.34
MDM2-220ENST00000496959 FESP07332 822 aa6.65□□□□□ -1.34
MDM2-220ENST00000496959 KITP10721 976 aa6.65□□□□□ -1.34
MDM2-220ENST00000496959 NPR1P16066 1061 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms