RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 DPH6Q7L8W6 267 aa16.16■□□□□ 0.18
NEK4-206ENST00000496822 SPATA2LQ8IUW3 424 aaPredicted RBP16.16■□□□□ 0.18
NEK4-206ENST00000496822 BPIFB1Q8TDL5 484 aa16.16■□□□□ 0.18
NEK4-206ENST00000496822 CSGALNACT1Q8TDX6 532 aa16.16■□□□□ 0.18
NEK4-206ENST00000496822 MYLPFQ96A32 169 aa16.16■□□□□ 0.18
NEK4-206ENST00000496822 SPATA32Q96LK8 384 aa16.16■□□□□ 0.18
NEK4-206ENST00000496822 FNBP1Q96RU3 617 aa16.16■□□□□ 0.18
NEK4-206ENST00000496822 MRPL45Q9BRJ2 306 aaKnown RBP16.16■□□□□ 0.18
NEK4-206ENST00000496822 EXOC1Q9NV70 894 aa16.16■□□□□ 0.18
NEK4-206ENST00000496822 OBP2AQ9NY56 170 aa16.16■□□□□ 0.18
NEK4-206ENST00000496822 GTSE1Q9NYZ3 720 aa16.16■□□□□ 0.18
NEK4-206ENST00000496822 FBXO4Q9UKT5 387 aa16.16■□□□□ 0.18
NEK4-206ENST00000496822 R3HCC1Q9Y3T6 440 aaKnown RBP16.16■□□□□ 0.18
NEK4-206ENST00000496822 CACNA1IQ9P0X4 2223 aa16.16■□□□□ 0.18
NEK4-206ENST00000496822 NCAM2O15394 837 aa16.15■□□□□ 0.18
NEK4-206ENST00000496822 NOL4O94818 638 aa16.15■□□□□ 0.18
NEK4-206ENST00000496822 PDGFRBP09619 1106 aa16.15■□□□□ 0.18
NEK4-206ENST00000496822 PRR29P0C7W0 189 aa16.15■□□□□ 0.18
NEK4-206ENST00000496822 WARSP23381 471 aaKnown RBP16.15■□□□□ 0.18
NEK4-206ENST00000496822 CMA1P23946 247 aa16.15■□□□□ 0.18
NEK4-206ENST00000496822 RPL10AP62906 217 aaKnown RBP16.15■□□□□ 0.18
NEK4-206ENST00000496822 KRT85P78386 507 aa16.15■□□□□ 0.18
NEK4-206ENST00000496822 ARHGAP29Q52LW3 1261 aa16.15■□□□□ 0.18
NEK4-206ENST00000496822 SCN4BQ8IWT1 228 aa16.15■□□□□ 0.18
NEK4-206ENST00000496822 CMTM8Q8IZV2 173 aa16.15■□□□□ 0.18
NEK4-206ENST00000496822 MAB21L3Q8N8X9 362 aa16.15■□□□□ 0.18
NEK4-206ENST00000496822 MMS19Q96T76 1030 aa16.15■□□□□ 0.18
NEK4-206ENST00000496822 CHRDQ9H2X0 955 aa16.15■□□□□ 0.18
NEK4-206ENST00000496822 PRMT8Q9NR22 394 aaPredicted RBP16.15■□□□□ 0.18
NEK4-206ENST00000496822 CDH9Q9ULB4 789 aa16.15■□□□□ 0.18
NEK4-206ENST00000496822 OBSL1O75147 1896 aa16.14■□□□□ 0.17
NEK4-206ENST00000496822 KIF26AQ9ULI4 1882 aaPredicted RBP16.14■□□□□ 0.17
NEK4-206ENST00000496822 F5P12259 2224 aa16.14■□□□□ 0.17
NEK4-206ENST00000496822 SPECC1L-ADORA2AF8WAN1 911 aa16.14■□□□□ 0.17
NEK4-206ENST00000496822 EXOC3O60645 756 aa16.14■□□□□ 0.17
NEK4-206ENST00000496822 LMNAP02545 664 aaKnown RBP16.14■□□□□ 0.17
NEK4-206ENST00000496822 CHRNB1P11230 501 aa16.14■□□□□ 0.17
NEK4-206ENST00000496822 CTHP32929 405 aa16.14■□□□□ 0.17
NEK4-206ENST00000496822 NDUFA8P51970 172 aa16.14■□□□□ 0.17
NEK4-206ENST00000496822 KPNA1P52294 538 aaPredicted RBP16.14■□□□□ 0.17
NEK4-206ENST00000496822 MYL6P60660 151 aa16.14■□□□□ 0.17
NEK4-206ENST00000496822 ZNF528Q3MIS6 628 aa16.14■□□□□ 0.17
NEK4-206ENST00000496822 ZC3H14Q6PJT7 736 aaKnown RBP16.14■□□□□ 0.17
NEK4-206ENST00000496822 USP13Q92995 863 aaPredicted RBP16.14■□□□□ 0.17
NEK4-206ENST00000496822 ELMO3Q96BJ8 720 aa16.14■□□□□ 0.17
NEK4-206ENST00000496822 FUBP3Q96I24 572 aaKnown RBP eCLIP16.14■□□□□ 0.17
NEK4-206ENST00000496822 XYLT2Q9H1B5 865 aa16.14■□□□□ 0.17
NEK4-206ENST00000496822 KCTD10Q9H3F6 313 aa16.14■□□□□ 0.17
NEK4-206ENST00000496822 LMAN1LQ9HAT1 526 aa16.14■□□□□ 0.17
NEK4-206ENST00000496822 RBM12Q9NTZ6 932 aaKnown RBP16.14■□□□□ 0.17
NEK4-206ENST00000496822 CGNQ9P2M7 1197 aaKnown RBP16.14■□□□□ 0.17
NEK4-206ENST00000496822 RIF1Q5UIP0 2472 aaKnown RBP16.13■□□□□ 0.17
NEK4-206ENST00000496822 LRRIQ3A6PVS8 624 aaPredicted RBP16.13■□□□□ 0.17
NEK4-206ENST00000496822 AVPR1AP37288 418 aa16.13■□□□□ 0.17
NEK4-206ENST00000496822 MAGEA11P43364 429 aa16.13■□□□□ 0.17
NEK4-206ENST00000496822 GAS6Q14393 721 aa16.13■□□□□ 0.17
NEK4-206ENST00000496822 MDH1BQ5I0G3 518 aa16.13■□□□□ 0.17
NEK4-206ENST00000496822 TDRD10Q5VZ19 366 aaKnown RBP16.13■□□□□ 0.17
NEK4-206ENST00000496822 C4orf50Q6ZRC1 276 aa16.13■□□□□ 0.17
NEK4-206ENST00000496822 MON1AQ86VX9 555 aa16.13■□□□□ 0.17
NEK4-206ENST00000496822 CELF5Q8N6W0 485 aaKnown RBP16.13■□□□□ 0.17
NEK4-206ENST00000496822 MRPS31Q92665 395 aaKnown RBP16.13■□□□□ 0.17
NEK4-206ENST00000496822 TRMT2BQ96GJ1 504 aaKnown RBP16.13■□□□□ 0.17
NEK4-206ENST00000496822 MYRFLQ96LU7 910 aa16.13■□□□□ 0.17
NEK4-206ENST00000496822 SEMA4AQ9H3S1 761 aa16.13■□□□□ 0.17
NEK4-206ENST00000496822 GOLPH3LQ9H4A5 285 aa16.13■□□□□ 0.17
NEK4-206ENST00000496822 DPEP3Q9H4B8 488 aa16.13■□□□□ 0.17
NEK4-206ENST00000496822 C8orf33Q9H7E9 229 aaPredicted RBP16.13■□□□□ 0.17
NEK4-206ENST00000496822 DMAC2Q9NW81 257 aa16.13■□□□□ 0.17
NEK4-206ENST00000496822 GVINP1Q7Z2Y8 2422 aa16.13■□□□□ 0.17
NEK4-206ENST00000496822 FANCMQ8IYD8 2048 aa16.12■□□□□ 0.17
NEK4-206ENST00000496822 FAM186AA6NE01 2351 aa16.12■□□□□ 0.17
NEK4-206ENST00000496822 FAM237AA0A1B0GTK4 181 aa16.12■□□□□ 0.17
NEK4-206ENST00000496822 TACC1O75410 805 aa16.12■□□□□ 0.17
NEK4-206ENST00000496822 TDGF1P13385 188 aa16.12■□□□□ 0.17
NEK4-206ENST00000496822 BDNFP23560 247 aa16.12■□□□□ 0.17
NEK4-206ENST00000496822 DDX6P26196 483 aaKnown RBP eCLIP16.12■□□□□ 0.17
NEK4-206ENST00000496822 SYKP43405 635 aa16.12■□□□□ 0.17
NEK4-206ENST00000496822 MLLT6P55198 1093 aaPredicted RBP16.12■□□□□ 0.17
NEK4-206ENST00000496822 TNNC1P63316 161 aa16.12■□□□□ 0.17
NEK4-206ENST00000496822 PLCB2Q00722 1185 aa16.12■□□□□ 0.17
NEK4-206ENST00000496822 CYP27A1Q02318 531 aa16.12■□□□□ 0.17
NEK4-206ENST00000496822 WDR72Q3MJ13 1102 aa16.12■□□□□ 0.17
NEK4-206ENST00000496822 TRIM68Q6AZZ1 485 aa16.12■□□□□ 0.17
NEK4-206ENST00000496822 Q6ZS52 159 aa16.12■□□□□ 0.17
NEK4-206ENST00000496822 OR6B3Q8NGW1 331 aa16.12■□□□□ 0.17
NEK4-206ENST00000496822 GOLGA5Q8TBA6 731 aa16.12■□□□□ 0.17
NEK4-206ENST00000496822 NELL1Q92832 810 aa16.12■□□□□ 0.17
NEK4-206ENST00000496822 MSANTD3Q96H12 275 aa16.12■□□□□ 0.17
NEK4-206ENST00000496822 PCED1BQ96HM7 432 aa16.12■□□□□ 0.17
NEK4-206ENST00000496822 SLC22A12Q96S37 553 aa16.12■□□□□ 0.17
NEK4-206ENST00000496822 SMYD3Q9H7B4 428 aa16.12■□□□□ 0.17
NEK4-206ENST00000496822 TRPC7Q9HCX4 862 aa16.12■□□□□ 0.17
NEK4-206ENST00000496822 HPS4Q9NQG7 708 aa16.12■□□□□ 0.17
NEK4-206ENST00000496822 GKN1Q9NS71 199 aa16.12■□□□□ 0.17
NEK4-206ENST00000496822 TDP1Q9NUW8 608 aa16.12■□□□□ 0.17
NEK4-206ENST00000496822 MAGEC2Q9UBF1 373 aaPredicted RBP16.12■□□□□ 0.17
NEK4-206ENST00000496822 UXTQ9UBK9 157 aaPredicted RBP16.12■□□□□ 0.17
NEK4-206ENST00000496822 NXF1Q9UBU9 619 aaKnown RBP16.12■□□□□ 0.17
NEK4-206ENST00000496822 USP25Q9UHP3 1055 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms