RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 HIBCHQ6NVY1 386 aaPredicted RBP13.74□□□□□ -0.21
GARNL3-220ENST00000496711 PLEKHH3Q7Z736 793 aa13.74□□□□□ -0.21
GARNL3-220ENST00000496711 ALLCQ8N6M5 410 aa13.74□□□□□ -0.21
GARNL3-220ENST00000496711 IPO4Q8TEX9 1081 aaKnown RBP13.74□□□□□ -0.21
GARNL3-220ENST00000496711 CENPTQ96BT3 561 aa13.74□□□□□ -0.21
GARNL3-220ENST00000496711 FOXP3Q9BZS1 431 aa13.74□□□□□ -0.21
GARNL3-220ENST00000496711 DNAJC17Q9NVM6 304 aaKnown RBP13.74□□□□□ -0.21
GARNL3-220ENST00000496711 NINJ2Q9NZG7 142 aa13.74□□□□□ -0.21
GARNL3-220ENST00000496711 BARX2Q9UMQ3 279 aaPredicted RBP13.74□□□□□ -0.21
GARNL3-220ENST00000496711 DRG1Q9Y295 367 aaKnown RBP13.74□□□□□ -0.21
GARNL3-220ENST00000496711 FAM169AQ9Y6X4 670 aa13.74□□□□□ -0.21
GARNL3-220ENST00000496711 C3orf70A6NLC5 250 aaPredicted RBP13.74□□□□□ -0.21
GARNL3-220ENST00000496711 DNALI1O14645 258 aaPredicted RBP13.74□□□□□ -0.21
GARNL3-220ENST00000496711 IFI35P80217 286 aaPredicted RBP13.74□□□□□ -0.21
GARNL3-220ENST00000496711 PPARDQ03181 441 aa13.74□□□□□ -0.21
GARNL3-220ENST00000496711 OASLQ15646 514 aaKnown RBP13.74□□□□□ -0.21
GARNL3-220ENST00000496711 CNGA2Q16280 664 aa13.74□□□□□ -0.21
GARNL3-220ENST00000496711 IQSEC1Q6DN90 963 aa13.74□□□□□ -0.21
GARNL3-220ENST00000496711 TAOK1Q7L7X3 1001 aa13.74□□□□□ -0.21
GARNL3-220ENST00000496711 APBB1IPQ7Z5R6 666 aaPredicted RBP13.74□□□□□ -0.21
GARNL3-220ENST00000496711 RELL1Q8IUW5 271 aa13.74□□□□□ -0.21
GARNL3-220ENST00000496711 NKD2Q969F2 451 aaPredicted RBP13.74□□□□□ -0.21
GARNL3-220ENST00000496711 MCRS1Q96EZ8 462 aa13.74□□□□□ -0.21
GARNL3-220ENST00000496711 KIF12Q96FN5 646 aa13.74□□□□□ -0.21
GARNL3-220ENST00000496711 SERPINB12Q96P63 405 aa13.74□□□□□ -0.21
GARNL3-220ENST00000496711 ZWILCHQ9H900 591 aa13.74□□□□□ -0.21
GARNL3-220ENST00000496711 EFR3BQ9Y2G0 817 aa13.74□□□□□ -0.21
GARNL3-220ENST00000496711 RRN3P2A6NIE6 340 aa13.73□□□□□ -0.21
GARNL3-220ENST00000496711 ITGAVP06756 1048 aa13.73□□□□□ -0.21
GARNL3-220ENST00000496711 CHN1P15882 459 aa13.73□□□□□ -0.21
GARNL3-220ENST00000496711 ATP5DP30049 168 aa13.73□□□□□ -0.21
GARNL3-220ENST00000496711 GPD2P43304 727 aa13.73□□□□□ -0.21
GARNL3-220ENST00000496711 NDST1P52848 882 aa13.73□□□□□ -0.21
GARNL3-220ENST00000496711 KYNUQ16719 465 aa13.73□□□□□ -0.21
GARNL3-220ENST00000496711 LONRF1Q17RB8 773 aa13.73□□□□□ -0.21
GARNL3-220ENST00000496711 SMTNL2Q2TAL5 461 aa13.73□□□□□ -0.21
GARNL3-220ENST00000496711 ERMARDQ5T6L9 678 aa13.73□□□□□ -0.21
GARNL3-220ENST00000496711 MICALCLQ6ZW33 695 aa13.73□□□□□ -0.21
GARNL3-220ENST00000496711 PRUNE1Q86TP1 453 aa13.73□□□□□ -0.21
GARNL3-220ENST00000496711 ZCCHC9Q8N567 271 aaKnown RBP13.73□□□□□ -0.21
GARNL3-220ENST00000496711 ARFGAP1Q8N6T3 406 aa13.73□□□□□ -0.21
GARNL3-220ENST00000496711 EMC1Q8N766 993 aa13.73□□□□□ -0.21
GARNL3-220ENST00000496711 MDM1Q8TC05 714 aa13.73□□□□□ -0.21
GARNL3-220ENST00000496711 HAUS1Q96CS2 278 aa13.73□□□□□ -0.21
GARNL3-220ENST00000496711 HEXIM2Q96MH2 286 aaKnown RBP13.73□□□□□ -0.21
GARNL3-220ENST00000496711 XPO6Q96QU8 1125 aaKnown RBP13.73□□□□□ -0.21
GARNL3-220ENST00000496711 ADAM7Q9H2U9 754 aa13.73□□□□□ -0.21
GARNL3-220ENST00000496711 GBA2Q9HCG7 927 aaPredicted RBP13.73□□□□□ -0.21
GARNL3-220ENST00000496711 NDC80O14777 642 aa13.72□□□□□ -0.21
GARNL3-220ENST00000496711 ADCY6O43306 1168 aa13.72□□□□□ -0.21
GARNL3-220ENST00000496711 NPTXRO95502 500 aa13.72□□□□□ -0.21
GARNL3-220ENST00000496711 ITGBL1O95965 494 aaPredicted RBP13.72□□□□□ -0.21
GARNL3-220ENST00000496711 IL1R2P27930 398 aa13.72□□□□□ -0.21
GARNL3-220ENST00000496711 ARSEP51690 589 aa13.72□□□□□ -0.21
GARNL3-220ENST00000496711 MYO1EQ12965 1108 aa13.72□□□□□ -0.21
GARNL3-220ENST00000496711 ACAP1Q15027 740 aa13.72□□□□□ -0.21
GARNL3-220ENST00000496711 KIZQ2M2Z5 673 aa13.72□□□□□ -0.21
GARNL3-220ENST00000496711 FAM102AQ5T9C2 384 aaPredicted RBP13.72□□□□□ -0.21
GARNL3-220ENST00000496711 NPLOC4Q8TAT6 608 aa13.72□□□□□ -0.21
GARNL3-220ENST00000496711 PWWP2AQ96N64 755 aa13.72□□□□□ -0.21
GARNL3-220ENST00000496711 NT5C1AQ9BXI3 368 aa13.72□□□□□ -0.21
GARNL3-220ENST00000496711 FRMD8P1Q9BZ68 369 aaPredicted RBP13.72□□□□□ -0.21
GARNL3-220ENST00000496711 PLEKHA5Q9HAU0 1116 aa13.72□□□□□ -0.21
GARNL3-220ENST00000496711 SETD4Q9NVD3 440 aa13.72□□□□□ -0.21
GARNL3-220ENST00000496711 KIAA1257Q9ULG3 409 aa13.72□□□□□ -0.21
GARNL3-220ENST00000496711 DERAQ9Y315 318 aa13.72□□□□□ -0.21
GARNL3-220ENST00000496711 DOCK3Q8IZD9 2030 aa13.72□□□□□ -0.21
GARNL3-220ENST00000496711 SLC15A5A6NIM6 579 aa13.72□□□□□ -0.21
GARNL3-220ENST00000496711 RNF8O76064 485 aa13.72□□□□□ -0.21
GARNL3-220ENST00000496711 STILQ15468 1287 aa13.72□□□□□ -0.21
GARNL3-220ENST00000496711 TAZQ16635 292 aa13.72□□□□□ -0.21
GARNL3-220ENST00000496711 SPRYD7Q5W111 196 aa13.72□□□□□ -0.21
GARNL3-220ENST00000496711 SLC27A1Q6PCB7 646 aa13.72□□□□□ -0.21
GARNL3-220ENST00000496711 LCLAT1Q6UWP7 414 aa13.72□□□□□ -0.21
GARNL3-220ENST00000496711 BBS12Q6ZW61 710 aa13.72□□□□□ -0.21
GARNL3-220ENST00000496711 DPH6Q7L8W6 267 aa13.72□□□□□ -0.21
GARNL3-220ENST00000496711 GLIS1Q8NBF1 620 aa13.72□□□□□ -0.21
GARNL3-220ENST00000496711 TTC13Q8NBP0 860 aa13.72□□□□□ -0.21
GARNL3-220ENST00000496711 SLC35B2Q8TB61 432 aa13.72□□□□□ -0.21
GARNL3-220ENST00000496711 SNX27Q96L92 541 aa13.72□□□□□ -0.21
GARNL3-220ENST00000496711 GCOM2Q9BZD3 368 aaPredicted RBP13.72□□□□□ -0.21
GARNL3-220ENST00000496711 MIS12Q9H081 205 aa13.72□□□□□ -0.21
GARNL3-220ENST00000496711 ADAMTS10Q9H324 1103 aa13.72□□□□□ -0.21
GARNL3-220ENST00000496711 PCDH9Q9HC56 1237 aa13.72□□□□□ -0.21
GARNL3-220ENST00000496711 SLC5A4Q9NY91 659 aa13.72□□□□□ -0.21
GARNL3-220ENST00000496711 TSPAN16Q9UKR8 245 aa13.72□□□□□ -0.21
GARNL3-220ENST00000496711 TRIP12Q14669 1992 aaPredicted RBP13.71□□□□□ -0.21
GARNL3-220ENST00000496711 C5orf60A6NFR6 353 aa13.71□□□□□ -0.21
GARNL3-220ENST00000496711 ANKRD65E5RJM6 399 aa13.71□□□□□ -0.21
GARNL3-220ENST00000496711 TCEA3O75764 348 aa13.71□□□□□ -0.21
GARNL3-220ENST00000496711 KDELR1P24390 212 aa13.71□□□□□ -0.21
GARNL3-220ENST00000496711 DYNLT1P63172 113 aa13.71□□□□□ -0.21
GARNL3-220ENST00000496711 CDC42EP1Q00587 391 aa13.71□□□□□ -0.21
GARNL3-220ENST00000496711 GPS1Q13098 491 aa13.71□□□□□ -0.21
GARNL3-220ENST00000496711 MORF4L2Q15014 288 aa13.71□□□□□ -0.21
GARNL3-220ENST00000496711 KCNT1Q5JUK3 1230 aa13.71□□□□□ -0.21
GARNL3-220ENST00000496711 CATSPER4Q7RTX7 472 aa13.71□□□□□ -0.21
GARNL3-220ENST00000496711 C10orf67Q8IYJ2 551 aa13.71□□□□□ -0.21
GARNL3-220ENST00000496711 UBA3Q8TBC4 463 aa13.71□□□□□ -0.21
GARNL3-220ENST00000496711 ATXN2LQ8WWM7 1075 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms