RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 TIGD2Q4W5G0 525 aa8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 PPM1LQ5SGD2 360 aa8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 ELMSAN1Q6PJG2 1045 aa8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 PQLC1Q8N2U9 271 aa8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 DUSP9Q99956 384 aaKnown RBP8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 UQCC2Q9BRT2 126 aa8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 TRIM9Q9C026 710 aa8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 PVALEFA0A1B0GWK0 134 aa8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 H7C0C1 242 aa8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 IFNB1P01574 187 aa8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 CDH2P19022 906 aaPredicted RBP8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 CCNA2P20248 432 aa8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 EIF4A1P60842 406 aaKnown RBP8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 MGAT5Q09328 741 aa8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 CAMK2BQ13554 666 aa8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 KCNJ8Q15842 424 aa8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 ITIH5Q86UX2 942 aa8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 FNIP1Q8TF40 1166 aa8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 C2orf49Q9BVC5 232 aaPredicted RBP8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 IRF2BPLQ9H1B7 796 aa8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 ZDHHC7Q9NXF8 308 aa8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 CRB1P82279 1406 aa8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 RNF103-CHMP3A0A140T963 221 aa8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 M0R3G1 203 aa8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 EYA2O00167 538 aa8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 VILLO15195 856 aa8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 TOM1L1O75674 476 aa8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 TMEM253P0C7T8 217 aa8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 DLATP10515 647 aaKnown RBP8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 MARVELD2Q8N4S9 558 aa8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 ADCY4Q8NFM4 1077 aa8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 S100ZQ8WXG8 99 aa8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 C8orf48Q96LL4 319 aa8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 CITED4Q96RK1 184 aa8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 LIN28AQ9H9Z2 209 aaKnown RBP8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 GPR108Q9NPR9 543 aa8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 VPS51Q9UID3 782 aa8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 PADI4Q9UM07 663 aa8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 PSMD13Q9UNM6 376 aa8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 SIGLEC16A6NMB1 481 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 SNPHO15079 494 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 MZF1P28698 734 aaPredicted RBP8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 HOXA10P31260 410 aaPredicted RBP8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 KRT20P35900 424 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 HSD17B4P51659 736 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 RCAN1P53805 252 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 LRRC41Q15345 812 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 CAVIN4Q5BKX8 364 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 OGFOD2Q6N063 350 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 C16orf89Q6UX73 402 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 STXBP4Q6ZWJ1 553 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 CCDC33Q8N5R6 958 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 C1orf54Q8WWF1 131 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 SPOCK2Q92563 424 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 LARP4BQ92615 738 aaKnown RBP8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 ART4Q93070 314 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 VMP1Q96GC9 406 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 MIPEPQ99797 713 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 KIFC3Q9BVG8 833 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 MRPL9Q9BYD2 267 aaKnown RBP8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 FRMD8Q9BZ67 464 aaPredicted RBP8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 SHCBP1LQ9BZQ2 653 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 VPS11Q9H270 941 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 PSTPIP2Q9H939 334 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 ZDHHC18Q9NUE0 388 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 KCNK4Q9NYG8 393 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 ZSWIM5Q9P217 1185 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 COPG2Q9UBF2 871 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 PCYOX1Q9UHG3 505 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 MST1RQ04912 1400 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 LINC00854A0A1B0GVQ3 168 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 FAM205CA6NFA0 338 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 CENPXA8MT69 81 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 TNPO2O14787 897 aaKnown RBP8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 PEX1O43933 1283 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 CCNT1O60563 726 aaKnown RBP8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 COL6A2P12110 1019 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 ZNF23P17027 643 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 RPA3P35244 121 aaPredicted RBP8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 COPZ1P61923 177 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 KCNH2Q12809 1159 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 TGFBIQ15582 683 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 MAPK11Q15759 364 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 IL23RQ5VWK5 629 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 RINT1Q6NUQ1 792 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 CDH24Q86UP0 819 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 CDR2LQ86X02 465 aaPredicted RBP8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 TTC13Q8NBP0 860 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 PDPRQ8NCN5 879 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 ATL1Q8WXF7 558 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 BAP1Q92560 729 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 SGF29Q96ES7 293 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 TSNARE1Q96NA8 513 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 CCSER1Q9C0I3 900 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 ING2Q9H160 280 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 HIPK3Q9H422 1215 aa8.52□□□□□ -1.05
CRNKL1-205ENST00000496549 NINJ2Q9NZG7 142 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms