RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 GDPD5Q8WTR4 605 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 RRN3Q9NYV6 651 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 A0A1W2PQJ5 194 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 ANO9A1A5B4 782 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 KRT86O43790 486 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 SLC2A3P11169 496 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 ATP1A3P13637 1013 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 CDC25BP30305 580 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 ADCY1Q08828 1119 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 RAB33AQ14088 237 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 GRIN2CQ14957 1233 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 DNTTIP2Q5QJE6 756 aaKnown RBP9.12□□□□□ -0.95
U2AF1-212ENST00000496462 ZC3H3Q8IXZ2 948 aaKnown RBP9.12□□□□□ -0.95
U2AF1-212ENST00000496462 PLCD3Q8N3E9 789 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 MRPL43Q8N983 215 aaKnown RBP9.12□□□□□ -0.95
U2AF1-212ENST00000496462 SPPL3Q8TCT6 385 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 SYN2Q92777 582 aaPredicted RBP9.12□□□□□ -0.95
U2AF1-212ENST00000496462 ZNF689Q96CS4 500 aaPredicted RBP9.12□□□□□ -0.95
U2AF1-212ENST00000496462 RBSNQ9H1K0 784 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 TRPC7Q9HCX4 862 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 ADAM22Q9P0K1 906 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 CTTNBP2NLQ9P2B4 639 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 L1RE1Q9UN81 338 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 NCOR1O75376 2440 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 LCTP09848 1927 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 TTLL13PA6NNM8 815 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 M0QZQ0 153 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 ITGB1P05556 798 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 ACAT1P24752 427 aaKnown RBP9.12□□□□□ -0.95
U2AF1-212ENST00000496462 MAGEA1P43355 309 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 PSMC1P62191 440 aaKnown RBP9.12□□□□□ -0.95
U2AF1-212ENST00000496462 DLG4P78352 724 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 CNGA2Q16280 664 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 ZDHHC17Q8IUH5 632 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 VSTM4Q8IW00 320 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 E2F7Q96AV8 911 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 LRRC45Q96CN5 670 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 C18orf8Q96DM3 657 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 HSFY1Q96LI6 401 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 PGLYRP2Q96PD5 576 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 KLHL5Q96PQ7 755 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 BAG1Q99933 345 aaPredicted RBP9.12□□□□□ -0.95
U2AF1-212ENST00000496462 ATXN3LQ9H3M9 355 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 ZDHHC7Q9NXF8 308 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 GTF3C4Q9UKN8 822 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 LRRC10BA6NIK2 292 aa9.11□□□□□ -0.95
U2AF1-212ENST00000496462 CYP26A1O43174 497 aa9.11□□□□□ -0.95
U2AF1-212ENST00000496462 OAZ2O95190 189 aa9.11□□□□□ -0.95
U2AF1-212ENST00000496462 CYP11A1P05108 521 aa9.11□□□□□ -0.95
U2AF1-212ENST00000496462 FGFR3P22607 806 aa9.11□□□□□ -0.95
U2AF1-212ENST00000496462 DDX6P26196 483 aaKnown RBP eCLIP9.11□□□□□ -0.95
U2AF1-212ENST00000496462 PBX3P40426 434 aa9.11□□□□□ -0.95
U2AF1-212ENST00000496462 PRSS55Q6UWB4 352 aaPredicted RBP9.11□□□□□ -0.95
U2AF1-212ENST00000496462 ALKAL1Q6UXT8 129 aa9.11□□□□□ -0.95
U2AF1-212ENST00000496462 UBE2Q2Q8WVN8 375 aa9.11□□□□□ -0.95
U2AF1-212ENST00000496462 MYLPFQ96A32 169 aa9.11□□□□□ -0.95
U2AF1-212ENST00000496462 ZMAT2Q96NC0 199 aaKnown RBP9.11□□□□□ -0.95
U2AF1-212ENST00000496462 SMYD3Q9H7B4 428 aa9.11□□□□□ -0.95
U2AF1-212ENST00000496462 STXBP5LQ9Y2K9 1186 aa9.11□□□□□ -0.95
U2AF1-212ENST00000496462 TRIP12Q14669 1992 aaPredicted RBP9.11□□□□□ -0.95
U2AF1-212ENST00000496462 CKMP06732 381 aa9.11□□□□□ -0.95
U2AF1-212ENST00000496462 MAGEA11P43364 429 aa9.11□□□□□ -0.95
U2AF1-212ENST00000496462 CBWD6Q4V339 395 aa9.11□□□□□ -0.95
U2AF1-212ENST00000496462 CBWD3Q5JTY5 395 aa9.11□□□□□ -0.95
U2AF1-212ENST00000496462 CBWD5Q5RIA9 395 aa9.11□□□□□ -0.95
U2AF1-212ENST00000496462 CCDC170Q8IYT3 715 aa9.11□□□□□ -0.95
U2AF1-212ENST00000496462 NUP93Q8N1F7 819 aa9.11□□□□□ -0.95
U2AF1-212ENST00000496462 SLC7A14Q8TBB6 771 aa9.11□□□□□ -0.95
U2AF1-212ENST00000496462 DCLK3Q9C098 648 aa9.11□□□□□ -0.95
U2AF1-212ENST00000496462 TTYH1Q9H313 450 aaPredicted RBP9.11□□□□□ -0.95
U2AF1-212ENST00000496462 HSFX1Q9UBD0 423 aa9.11□□□□□ -0.95
U2AF1-212ENST00000496462 PRRC2BQ5JSZ5 2229 aaKnown RBP9.11□□□□□ -0.95
U2AF1-212ENST00000496462 TRAV19A0A0A6YYK7 116 aa9.11□□□□□ -0.95
U2AF1-212ENST00000496462 ACO1P21399 889 aaKnown RBP9.11□□□□□ -0.95
U2AF1-212ENST00000496462 BMP6P22004 513 aa9.11□□□□□ -0.95
U2AF1-212ENST00000496462 SSTR3P32745 418 aaPredicted RBP9.11□□□□□ -0.95
U2AF1-212ENST00000496462 HOXD13P35453 343 aa9.11□□□□□ -0.95
U2AF1-212ENST00000496462 RARS2Q5T160 578 aaKnown RBP9.11□□□□□ -0.95
U2AF1-212ENST00000496462 SPOPLQ6IQ16 392 aa9.11□□□□□ -0.95
U2AF1-212ENST00000496462 ZNF557Q8N988 423 aaPredicted RBP9.11□□□□□ -0.95
U2AF1-212ENST00000496462 ANKRD52Q8NB46 1076 aa9.11□□□□□ -0.95
U2AF1-212ENST00000496462 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.11□□□□□ -0.95
U2AF1-212ENST00000496462 TATDN2Q93075 761 aa9.11□□□□□ -0.95
U2AF1-212ENST00000496462 CORO1BQ9BR76 489 aa9.11□□□□□ -0.95
U2AF1-212ENST00000496462 CWH43Q9H720 699 aa9.11□□□□□ -0.95
U2AF1-212ENST00000496462 CD207Q9UJ71 328 aa9.11□□□□□ -0.95
U2AF1-212ENST00000496462 NAGPAQ9UK23 515 aa9.11□□□□□ -0.95
U2AF1-212ENST00000496462 TET1Q8NFU7 2136 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 DAPK3O43293 454 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 NPR3P17342 541 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 BDNFP23560 247 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 RAP1GAPP47736 663 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 ZBTB6Q15916 424 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 SLC2A14Q8TDB8 520 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 HLA-CQ95604 372 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 AGPAT1Q99943 283 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 GPR62Q9BZJ7 368 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 MAN1C1Q9NR34 630 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 SLC8A2Q9UPR5 921 aa9.1□□□□□ -0.95
U2AF1-212ENST00000496462 MEIS3P2A8K0S8 358 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms