RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 ANAPC1Q9H1A4 1944 aa16.82■□□□□ 0.28
HDAC4-213ENST00000496347 MAN2B1O00754 1011 aa16.82■□□□□ 0.28
HDAC4-213ENST00000496347 ZNF263O14978 683 aa16.82■□□□□ 0.28
HDAC4-213ENST00000496347 CALUO43852 315 aaPredicted RBP16.82■□□□□ 0.28
HDAC4-213ENST00000496347 NOL4O94818 638 aa16.82■□□□□ 0.28
HDAC4-213ENST00000496347 DCNP07585 359 aaKnown RBP16.82■□□□□ 0.28
HDAC4-213ENST00000496347 PRR29P0C7W0 189 aa16.82■□□□□ 0.28
HDAC4-213ENST00000496347 GLULP15104 373 aa16.82■□□□□ 0.28
HDAC4-213ENST00000496347 HMGA1P17096 107 aaKnown RBP16.82■□□□□ 0.28
HDAC4-213ENST00000496347 MLLT6P55198 1093 aaPredicted RBP16.82■□□□□ 0.28
HDAC4-213ENST00000496347 NLRP12P59046 1061 aa16.82■□□□□ 0.28
HDAC4-213ENST00000496347 UBXN2BQ14CS0 331 aa16.82■□□□□ 0.28
HDAC4-213ENST00000496347 NFIL3Q16649 462 aa16.82■□□□□ 0.28
HDAC4-213ENST00000496347 VSTM1Q6UX27 236 aa16.82■□□□□ 0.28
HDAC4-213ENST00000496347 YAF2Q8IY57 180 aa16.82■□□□□ 0.28
HDAC4-213ENST00000496347 GIPC2Q8TF65 315 aa16.82■□□□□ 0.28
HDAC4-213ENST00000496347 MYLPFQ96A32 169 aa16.82■□□□□ 0.28
HDAC4-213ENST00000496347 XYLT2Q9H1B5 865 aa16.82■□□□□ 0.28
HDAC4-213ENST00000496347 GTF3C4Q9UKN8 822 aa16.82■□□□□ 0.28
HDAC4-213ENST00000496347 TRAF3IP3Q9Y228 551 aa16.82■□□□□ 0.28
HDAC4-213ENST00000496347 PTPRZ1P23471 2315 aaPredicted RBP16.82■□□□□ 0.28
HDAC4-213ENST00000496347 ZNF292O60281 2723 aa16.82■□□□□ 0.28
HDAC4-213ENST00000496347 LRRIQ3A6PVS8 624 aaPredicted RBP16.81■□□□□ 0.28
HDAC4-213ENST00000496347 DPYSL4O14531 572 aa16.81■□□□□ 0.28
HDAC4-213ENST00000496347 MAPK13O15264 365 aa16.81■□□□□ 0.28
HDAC4-213ENST00000496347 CHADO15335 359 aa16.81■□□□□ 0.28
HDAC4-213ENST00000496347 NCAM2O15394 837 aa16.81■□□□□ 0.28
HDAC4-213ENST00000496347 ZNF202O95125 648 aa16.81■□□□□ 0.28
HDAC4-213ENST00000496347 PRAMEF12O95522 483 aa16.81■□□□□ 0.28
HDAC4-213ENST00000496347 CYP2F1P24903 491 aa16.81■□□□□ 0.28
HDAC4-213ENST00000496347 CDR1P51861 262 aa16.81■□□□□ 0.28
HDAC4-213ENST00000496347 PSMC1P62191 440 aaKnown RBP16.81■□□□□ 0.28
HDAC4-213ENST00000496347 CYP4F8P98187 520 aa16.81■□□□□ 0.28
HDAC4-213ENST00000496347 BIRC3Q13489 604 aa16.81■□□□□ 0.28
HDAC4-213ENST00000496347 CCDC142Q17RM4 750 aa16.81■□□□□ 0.28
HDAC4-213ENST00000496347 ZNF699Q32M78 642 aa16.81■□□□□ 0.28
HDAC4-213ENST00000496347 WDR72Q3MJ13 1102 aa16.81■□□□□ 0.28
HDAC4-213ENST00000496347 TDRD10Q5VZ19 366 aaKnown RBP16.81■□□□□ 0.28
HDAC4-213ENST00000496347 TMEM150AQ86TG1 271 aa16.81■□□□□ 0.28
HDAC4-213ENST00000496347 PARD3BQ8TEW8 1205 aa16.81■□□□□ 0.28
HDAC4-213ENST00000496347 RSPRY1Q96DX4 576 aa16.81■□□□□ 0.28
HDAC4-213ENST00000496347 MYRFLQ96LU7 910 aa16.81■□□□□ 0.28
HDAC4-213ENST00000496347 SNX25Q9H3E2 840 aa16.81■□□□□ 0.28
HDAC4-213ENST00000496347 GDPD2Q9HCC8 539 aa16.81■□□□□ 0.28
HDAC4-213ENST00000496347 FRMD4BQ9Y2L6 1034 aa16.81■□□□□ 0.28
HDAC4-213ENST00000496347 PIAS3Q9Y6X2 628 aa16.81■□□□□ 0.28
HDAC4-213ENST00000496347 MYBPHLA2RUH7 354 aa16.8■□□□□ 0.28
HDAC4-213ENST00000496347 HCRTO43612 131 aa16.8■□□□□ 0.28
HDAC4-213ENST00000496347 PHACTR2O75167 634 aa16.8■□□□□ 0.28
HDAC4-213ENST00000496347 TARSP26639 723 aaKnown RBP16.8■□□□□ 0.28
HDAC4-213ENST00000496347 RPS9P46781 194 aaKnown RBP16.8■□□□□ 0.28
HDAC4-213ENST00000496347 CASP4P49662 377 aa16.8■□□□□ 0.28
HDAC4-213ENST00000496347 GPR15P49685 360 aa16.8■□□□□ 0.28
HDAC4-213ENST00000496347 MYL6P60660 151 aa16.8■□□□□ 0.28
HDAC4-213ENST00000496347 PLCB2Q00722 1185 aa16.8■□□□□ 0.28
HDAC4-213ENST00000496347 ENPEPQ07075 957 aa16.8■□□□□ 0.28
HDAC4-213ENST00000496347 NCOA4Q13772 614 aa16.8■□□□□ 0.28
HDAC4-213ENST00000496347 ARHGAP29Q52LW3 1261 aa16.8■□□□□ 0.28
HDAC4-213ENST00000496347 C1orf210Q8IVY1 113 aa16.8■□□□□ 0.28
HDAC4-213ENST00000496347 CMTM8Q8IZV2 173 aa16.8■□□□□ 0.28
HDAC4-213ENST00000496347 GUF1Q8N442 669 aaKnown RBP16.8■□□□□ 0.28
HDAC4-213ENST00000496347 MYCBPAPQ8TBZ2 947 aa16.8■□□□□ 0.28
HDAC4-213ENST00000496347 PLEKHO2Q8TD55 490 aa16.8■□□□□ 0.28
HDAC4-213ENST00000496347 TMC2Q8TDI7 906 aa16.8■□□□□ 0.28
HDAC4-213ENST00000496347 ZNF516Q92618 1163 aa16.8■□□□□ 0.28
HDAC4-213ENST00000496347 MRPS31Q92665 395 aaKnown RBP16.8■□□□□ 0.28
HDAC4-213ENST00000496347 CLDN23Q96B33 292 aa16.8■□□□□ 0.28
HDAC4-213ENST00000496347 IER2Q9BTL4 223 aa16.8■□□□□ 0.28
HDAC4-213ENST00000496347 KIF9Q9HAQ2 790 aa16.8■□□□□ 0.28
HDAC4-213ENST00000496347 CRTAC1Q9NQ79 661 aa16.8■□□□□ 0.28
HDAC4-213ENST00000496347 EP300Q09472 2414 aaPredicted RBP16.8■□□□□ 0.28
HDAC4-213ENST00000496347 OTOGLQ3ZCN5 2332 aa16.79■□□□□ 0.28
HDAC4-213ENST00000496347 FAM170BA6NMN3 283 aa16.79■□□□□ 0.28
HDAC4-213ENST00000496347 TRIM66O15016 1216 aa16.79■□□□□ 0.28
HDAC4-213ENST00000496347 GFRA3O60609 400 aa16.79■□□□□ 0.28
HDAC4-213ENST00000496347 TADA3O75528 432 aa16.79■□□□□ 0.28
HDAC4-213ENST00000496347 CST3P01034 146 aaPredicted RBP16.79■□□□□ 0.28
HDAC4-213ENST00000496347 F11P03951 625 aa16.79■□□□□ 0.28
HDAC4-213ENST00000496347 LMO2P25791 158 aa16.79■□□□□ 0.28
HDAC4-213ENST00000496347 GNL1P36915 607 aaPredicted RBP16.79■□□□□ 0.28
HDAC4-213ENST00000496347 AVPR1AP37288 418 aa16.79■□□□□ 0.28
HDAC4-213ENST00000496347 DDR2Q16832 855 aa16.79■□□□□ 0.28
HDAC4-213ENST00000496347 ZACNQ401N2 412 aa16.79■□□□□ 0.28
HDAC4-213ENST00000496347 CEP135Q66GS9 1140 aa16.79■□□□□ 0.28
HDAC4-213ENST00000496347 ZC3H14Q6PJT7 736 aaKnown RBP16.79■□□□□ 0.28
HDAC4-213ENST00000496347 CELF5Q8N6W0 485 aaKnown RBP16.79■□□□□ 0.28
HDAC4-213ENST00000496347 BPIFB1Q8TDL5 484 aa16.79■□□□□ 0.28
HDAC4-213ENST00000496347 CSGALNACT1Q8TDX6 532 aa16.79■□□□□ 0.28
HDAC4-213ENST00000496347 PCED1BQ96HM7 432 aa16.79■□□□□ 0.28
HDAC4-213ENST00000496347 SPATA17Q96L03 361 aa16.79■□□□□ 0.28
HDAC4-213ENST00000496347 MRPL45Q9BRJ2 306 aaKnown RBP16.79■□□□□ 0.28
HDAC4-213ENST00000496347 ELOVL4Q9GZR5 314 aa16.79■□□□□ 0.28
HDAC4-213ENST00000496347 EHD2Q9NZN4 543 aa16.79■□□□□ 0.28
HDAC4-213ENST00000496347 MAGED2Q9UNF1 606 aaPredicted RBP16.79■□□□□ 0.28
HDAC4-213ENST00000496347 GOLGA6L4A6NEF3 574 aa16.78■□□□□ 0.28
HDAC4-213ENST00000496347 SHISA7A6NL88 538 aa16.78■□□□□ 0.28
HDAC4-213ENST00000496347 SLC38A8A6NNN8 435 aa16.78■□□□□ 0.28
HDAC4-213ENST00000496347 IKBKBO14920 756 aa16.78■□□□□ 0.28
HDAC4-213ENST00000496347 ATP2C2O75185 946 aa16.78■□□□□ 0.28
HDAC4-213ENST00000496347 P4HA1P13674 534 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms