RNA–Protein interactions for RNA: ENST00000496049.1

GAPDH-210, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 2

Gene GAPDH, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-210ENST00000496049 CTNNB1P35222 781 aa15.92■□□□□ 0.14
GAPDH-210ENST00000496049 EIF4A3P38919 411 aaKnown RBP15.92■□□□□ 0.14
GAPDH-210ENST00000496049 KIF11P52732 1056 aa15.92■□□□□ 0.14
GAPDH-210ENST00000496049 CCZ1BP86790 482 aa15.92■□□□□ 0.14
GAPDH-210ENST00000496049 CCZ1P86791 482 aaPredicted RBP15.92■□□□□ 0.14
GAPDH-210ENST00000496049 MAPRE1Q15691 268 aaKnown RBP15.92■□□□□ 0.14
GAPDH-210ENST00000496049 USP41Q3LFD5 358 aa15.92■□□□□ 0.14
GAPDH-210ENST00000496049 PPP1R2P3Q6NXS1 205 aa15.92■□□□□ 0.14
GAPDH-210ENST00000496049 ANKS3Q6ZW76 656 aa15.92■□□□□ 0.14
GAPDH-210ENST00000496049 ACOT1Q86TX2 421 aa15.92■□□□□ 0.14
GAPDH-210ENST00000496049 NOP9Q86U38 636 aaKnown RBP15.92■□□□□ 0.14
GAPDH-210ENST00000496049 TMEM139Q8IV31 216 aa15.92■□□□□ 0.14
GAPDH-210ENST00000496049 TXLNBQ8N3L3 684 aa15.92■□□□□ 0.14
GAPDH-210ENST00000496049 SLC4A11Q8NBS3 891 aa15.92■□□□□ 0.14
GAPDH-210ENST00000496049 B3GALNT2Q8NCR0 500 aa15.92■□□□□ 0.14
GAPDH-210ENST00000496049 WHAMMQ8TF30 809 aa15.92■□□□□ 0.14
GAPDH-210ENST00000496049 SAMD11Q96NU1 681 aa15.92■□□□□ 0.14
GAPDH-210ENST00000496049 ACBD6Q9BR61 282 aa15.92■□□□□ 0.14
GAPDH-210ENST00000496049 TTPALQ9BTX7 342 aa15.92■□□□□ 0.14
GAPDH-210ENST00000496049 HERC2P3Q9BVR0 1158 aa15.92■□□□□ 0.14
GAPDH-210ENST00000496049 PLVAPQ9BX97 442 aa15.92■□□□□ 0.14
GAPDH-210ENST00000496049 NOCTQ9UK39 431 aaKnown RBP15.92■□□□□ 0.14
GAPDH-210ENST00000496049 LCHNA4D1U4 455 aa15.91■□□□□ 0.14
GAPDH-210ENST00000496049 OR6C75A6NL08 312 aa15.91■□□□□ 0.14
GAPDH-210ENST00000496049 SOD2P04179 222 aa15.91■□□□□ 0.14
GAPDH-210ENST00000496049 URODP06132 367 aa15.91■□□□□ 0.14
GAPDH-210ENST00000496049 PLEKP08567 350 aaPredicted RBP15.91■□□□□ 0.14
GAPDH-210ENST00000496049 PDGFRBP09619 1106 aa15.91■□□□□ 0.14
GAPDH-210ENST00000496049 BRD2P25440 801 aaKnown RBP15.91■□□□□ 0.14
GAPDH-210ENST00000496049 CREMQ03060 361 aa15.91■□□□□ 0.14
GAPDH-210ENST00000496049 ORC1Q13415 861 aa15.91■□□□□ 0.14
GAPDH-210ENST00000496049 VARS2Q5ST30 1063 aaKnown RBP15.91■□□□□ 0.14
GAPDH-210ENST00000496049 TAF3Q5VWG9 929 aa15.91■□□□□ 0.14
GAPDH-210ENST00000496049 ZNF571Q7Z3V5 609 aaPredicted RBP15.91■□□□□ 0.14
GAPDH-210ENST00000496049 DDX53Q86TM3 631 aaKnown RBP15.91■□□□□ 0.14
GAPDH-210ENST00000496049 OSTM1Q86WC4 334 aa15.91■□□□□ 0.14
GAPDH-210ENST00000496049 TMEM173Q86WV6 379 aaPredicted RBP15.91■□□□□ 0.14
GAPDH-210ENST00000496049 TWNKQ96RR1 684 aa15.91■□□□□ 0.14
GAPDH-210ENST00000496049 CHP1Q99653 195 aa15.91■□□□□ 0.14
GAPDH-210ENST00000496049 GPR62Q9BZJ7 368 aa15.91■□□□□ 0.14
GAPDH-210ENST00000496049 KCNF1Q9H3M0 494 aa15.91■□□□□ 0.14
GAPDH-210ENST00000496049 HESX1Q9UBX0 185 aa15.91■□□□□ 0.14
GAPDH-210ENST00000496049 SSX2IPQ9Y2D8 614 aa15.91■□□□□ 0.14
GAPDH-210ENST00000496049 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.91■□□□□ 0.141e-323■■■□□ 15
GAPDH-210ENST00000496049 MYO7AQ13402 2215 aa15.9■□□□□ 0.14
GAPDH-210ENST00000496049 FGF18O76093 207 aa15.9■□□□□ 0.14
GAPDH-210ENST00000496049 OAZ2O95190 189 aa15.9■□□□□ 0.14
GAPDH-210ENST00000496049 NDUFA10O95299 355 aa15.9■□□□□ 0.14
GAPDH-210ENST00000496049 LSM8O95777 96 aaKnown RBP15.9■□□□□ 0.14
GAPDH-210ENST00000496049 IGFBP6P24592 240 aaPredicted RBP15.9■□□□□ 0.14
GAPDH-210ENST00000496049 ACAT1P24752 427 aaKnown RBP15.9■□□□□ 0.14
GAPDH-210ENST00000496049 IRS1P35568 1242 aa15.9■□□□□ 0.14
GAPDH-210ENST00000496049 GLUD2P49448 558 aa15.9■□□□□ 0.14
GAPDH-210ENST00000496049 SLC8A3P57103 927 aa15.9■□□□□ 0.14
GAPDH-210ENST00000496049 PSMC1P62191 440 aaKnown RBP15.9■□□□□ 0.14
GAPDH-210ENST00000496049 KRT83P78385 493 aa15.9■□□□□ 0.14
GAPDH-210ENST00000496049 SLC18A3Q16572 532 aa15.9■□□□□ 0.14
GAPDH-210ENST00000496049 CTXN3Q4LDR2 81 aa15.9■□□□□ 0.14
GAPDH-210ENST00000496049 INTS6LQ5JSJ4 861 aaKnown RBP15.9■□□□□ 0.14
GAPDH-210ENST00000496049 DCP1BQ8IZD4 617 aaKnown RBP15.9■□□□□ 0.14
GAPDH-210ENST00000496049 CRYBG2Q8N1P7 616 aa15.9■□□□□ 0.14
GAPDH-210ENST00000496049 MSANTD4Q8NCY6 345 aa15.9■□□□□ 0.14
GAPDH-210ENST00000496049 SLC20A1Q8WUM9 679 aa15.9■□□□□ 0.14
GAPDH-210ENST00000496049 BCL7CQ8WUZ0 217 aaPredicted RBP15.9■□□□□ 0.14
GAPDH-210ENST00000496049 ZNF606Q8WXB4 792 aa15.9■□□□□ 0.14
GAPDH-210ENST00000496049 ATOH1Q92858 354 aaPredicted RBP15.9■□□□□ 0.14
GAPDH-210ENST00000496049 ZNF830Q96NB3 372 aaPredicted RBP15.9■□□□□ 0.14
GAPDH-210ENST00000496049 PRRX2Q99811 253 aa15.9■□□□□ 0.14
GAPDH-210ENST00000496049 C11orf84Q9BUA3 381 aaPredicted RBP15.9■□□□□ 0.14
GAPDH-210ENST00000496049 DPEP3Q9H4B8 488 aa15.9■□□□□ 0.14
GAPDH-210ENST00000496049 LMCD1Q9NZU5 365 aa15.9■□□□□ 0.14
GAPDH-210ENST00000496049 LINC01553A4QN01 128 aa15.89■□□□□ 0.13
GAPDH-210ENST00000496049 EIF3CLB5ME19 914 aaKnown RBP15.89■□□□□ 0.13
GAPDH-210ENST00000496049 M0QYV0 167 aa15.89■□□□□ 0.13
GAPDH-210ENST00000496049 CCP110O43303 1012 aa15.89■□□□□ 0.13
GAPDH-210ENST00000496049 MMEP08473 750 aa15.89■□□□□ 0.13
GAPDH-210ENST00000496049 PTPN1P18031 435 aaKnown RBP15.89■□□□□ 0.13
GAPDH-210ENST00000496049 LMO2P25791 158 aa15.89■□□□□ 0.13
GAPDH-210ENST00000496049 BMPR1AP36894 532 aa15.89■□□□□ 0.13
GAPDH-210ENST00000496049 ID4P47928 161 aa15.89■□□□□ 0.13
GAPDH-210ENST00000496049 PLCB3Q01970 1234 aa15.89■□□□□ 0.13
GAPDH-210ENST00000496049 GOLGA7BQ2TAP0 167 aa15.89■□□□□ 0.13
GAPDH-210ENST00000496049 PUS10Q3MIT2 529 aaKnown RBP15.89■□□□□ 0.13
GAPDH-210ENST00000496049 MDH1BQ5I0G3 518 aa15.89■□□□□ 0.13
GAPDH-210ENST00000496049 C10orf76Q5T2E6 689 aa15.89■□□□□ 0.13
GAPDH-210ENST00000496049 ARHGAP17Q68EM7 881 aa15.89■□□□□ 0.13
GAPDH-210ENST00000496049 C4orf50Q6ZRC1 276 aa15.89■□□□□ 0.13
GAPDH-210ENST00000496049 EP400NLQ6ZTU2 488 aa15.89■□□□□ 0.13
GAPDH-210ENST00000496049 GLYCTKQ8IVS8 523 aa15.89■□□□□ 0.13
GAPDH-210ENST00000496049 SUGP1Q8IWZ8 645 aaKnown RBP15.89■□□□□ 0.13
GAPDH-210ENST00000496049 PBXIP1Q96AQ6 731 aa15.89■□□□□ 0.13
GAPDH-210ENST00000496049 NOX5Q96PH1 765 aa15.89■□□□□ 0.13
GAPDH-210ENST00000496049 EIF3CQ99613 913 aaKnown RBP15.89■□□□□ 0.13
GAPDH-210ENST00000496049 MED10Q9BTT4 135 aa15.89■□□□□ 0.13
GAPDH-210ENST00000496049 ACP6Q9NPH0 428 aa15.89■□□□□ 0.13
GAPDH-210ENST00000496049 FAM49BQ9NUQ9 324 aa15.89■□□□□ 0.13
GAPDH-210ENST00000496049 ADAMTS1Q9UHI8 967 aa15.89■□□□□ 0.13
GAPDH-210ENST00000496049 PCDHGC3Q9UN70 934 aa15.89■□□□□ 0.13
GAPDH-210ENST00000496049 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.89■□□□□ 0.13
GAPDH-210ENST00000496049 EPN1Q9Y6I3 576 aaPredicted RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms