RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 NIPA2Q8N8Q9 360 aa7.31□□□□□ -1.24
USP39-219ENST00000496047 CEP120Q8N960 986 aa7.31□□□□□ -1.24
USP39-219ENST00000496047 C1orf127Q8N9H9 656 aa7.31□□□□□ -1.24
USP39-219ENST00000496047 FNIP1Q8TF40 1166 aa7.31□□□□□ -1.24
USP39-219ENST00000496047 ALG3Q92685 438 aa7.31□□□□□ -1.24
USP39-219ENST00000496047 C18orf8Q96DM3 657 aa7.31□□□□□ -1.24
USP39-219ENST00000496047 TMEM176AQ96HP8 235 aa7.31□□□□□ -1.24
USP39-219ENST00000496047 SNX27Q96L92 541 aa7.31□□□□□ -1.24
USP39-219ENST00000496047 MCEEQ96PE7 176 aa7.31□□□□□ -1.24
USP39-219ENST00000496047 ERP44Q9BS26 406 aa7.31□□□□□ -1.24
USP39-219ENST00000496047 MTG1Q9BT17 334 aaPredicted RBP7.31□□□□□ -1.24
USP39-219ENST00000496047 NT5C1AQ9BXI3 368 aa7.31□□□□□ -1.24
USP39-219ENST00000496047 FRMD8P1Q9BZ68 369 aaPredicted RBP7.31□□□□□ -1.24
USP39-219ENST00000496047 UBXN6Q9BZV1 441 aa7.31□□□□□ -1.24
USP39-219ENST00000496047 DPH5Q9H2P9 285 aa7.31□□□□□ -1.24
USP39-219ENST00000496047 MINDY3Q9H8M7 445 aa7.31□□□□□ -1.24
USP39-219ENST00000496047 ACP6Q9NPH0 428 aa7.31□□□□□ -1.24
USP39-219ENST00000496047 SETD4Q9NVD3 440 aa7.31□□□□□ -1.24
USP39-219ENST00000496047 ASIC3Q9UHC3 531 aa7.31□□□□□ -1.24
USP39-219ENST00000496047 BARX2Q9UMQ3 279 aaPredicted RBP7.31□□□□□ -1.24
USP39-219ENST00000496047 GNEQ9Y223 722 aaKnown RBP7.31□□□□□ -1.24
USP39-219ENST00000496047 PIN4Q9Y237 131 aaKnown RBP7.31□□□□□ -1.24
USP39-219ENST00000496047 SHROOM3Q8TF72 1996 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 ESYT3A0FGR9 886 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 MBLAC1A4D2B0 266 aaPredicted RBP7.3□□□□□ -1.24
USP39-219ENST00000496047 HMGB1P1B2RPK0 211 aaPredicted RBP7.3□□□□□ -1.24
USP39-219ENST00000496047 CFAP99D6REC4 459 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 IGF2BP3O00425 579 aaKnown RBP eCLIP7.3□□□□□ -1.24
USP39-219ENST00000496047 FSCN2O14926 492 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 DUSP11O75319 330 aaKnown RBP7.3□□□□□ -1.24
USP39-219ENST00000496047 CILPO75339 1184 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 WEE2P0C1S8 567 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 MYBL2P10244 700 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 RARBP10826 455 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 PYGMP11217 842 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 KRT3P12035 628 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 ATF2P15336 505 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 PSMA2P25787 234 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 ATP5DP30049 168 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 COILP38432 576 aaPredicted RBP7.3□□□□□ -1.24
USP39-219ENST00000496047 LMAN1P49257 510 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 TAF6P49848 677 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 PEX5P50542 639 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 CRYBB1P53674 252 aaPredicted RBP7.3□□□□□ -1.24
USP39-219ENST00000496047 PSMC1P62191 440 aaKnown RBP7.3□□□□□ -1.24
USP39-219ENST00000496047 DMTNQ08495 405 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 INCA1Q0VD86 236 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 MAMLD1Q13495 774 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 FSCN1Q16658 493 aaKnown RBP7.3□□□□□ -1.24
USP39-219ENST00000496047 DENND2CQ68D51 928 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 BRICD5Q6PL45 260 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 BLOC1S3Q6QNY0 202 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 C17orf99Q6UX52 265 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 GSTA5Q7RTV2 222 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 POLNQ7Z5Q5 900 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 ADAT2Q7Z6V5 191 aaKnown RBP7.3□□□□□ -1.24
USP39-219ENST00000496047 UNC93AQ86WB7 457 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 CDR2LQ86X02 465 aaPredicted RBP7.3□□□□□ -1.24
USP39-219ENST00000496047 ZDHHC17Q8IUH5 632 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 KIAA0319LQ8IZA0 1049 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 CCDC89Q8N998 374 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 HDAC7Q8WUI4 952 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 KRT35Q92764 455 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 SLCO2A1Q92959 643 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 BTBD6Q96KE9 485 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 HEXIM2Q96MH2 286 aaKnown RBP7.3□□□□□ -1.24
USP39-219ENST00000496047 GDAP1L1Q96MZ0 367 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 OSMRQ99650 979 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 PTPN18Q99952 460 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 TRIM51Q9BSJ1 452 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 FOXP3Q9BZS1 431 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 XYLT2Q9H1B5 865 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 SNX25Q9H3E2 840 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 LRRC19Q9H756 370 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 SMYD3Q9H7B4 428 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 FAM204AQ9H8W3 233 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 SLC38A7Q9NVC3 462 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 ASNSD1Q9NWL6 643 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 ABT1Q9ULW3 272 aaKnown RBP7.3□□□□□ -1.24
USP39-219ENST00000496047 POLIQ9UNA4 740 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.3□□□□□ -1.24
USP39-219ENST00000496047 FAN1Q9Y2M0 1017 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 TRPV2Q9Y5S1 764 aa7.3□□□□□ -1.24
USP39-219ENST00000496047 FAM170AA1A519 330 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 ARHGEF37A1IGU5 675 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 TMEM88BA6NKF7 163 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 SIGLEC16A6NMB1 481 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 GOLGA8SH3BPF8 625 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 H3BQF6 201 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 HAS3O00219 553 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 DAPK3O43293 454 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 MICAL2O94851 1124 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 IVLP07476 585 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 C6orf222P0C671 652 aaPredicted RBP7.29□□□□□ -1.24
USP39-219ENST00000496047 ZNF865P0CJ78 1059 aaPredicted RBP7.29□□□□□ -1.24
USP39-219ENST00000496047 ITGA4P13612 1032 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 CYP3A5P20815 502 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 CYP2C19P33261 490 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 PTPN7P35236 360 aa7.29□□□□□ -1.24
USP39-219ENST00000496047 ABL2P42684 1182 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms