RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 ETNPPLQ8TBG4 499 aa10.48□□□□□ -0.73
SMARCAL1-213ENST00000496037 HMGB4Q8WW32 186 aa10.48□□□□□ -0.73
SMARCAL1-213ENST00000496037 SPIRE2Q8WWL2 714 aa10.48□□□□□ -0.73
SMARCAL1-213ENST00000496037 THAP11Q96EK4 314 aa10.48□□□□□ -0.73
SMARCAL1-213ENST00000496037 YTHDC1Q96MU7 727 aaKnown RBP10.48□□□□□ -0.73
SMARCAL1-213ENST00000496037 CDC6Q99741 560 aa10.48□□□□□ -0.73
SMARCAL1-213ENST00000496037 ECT2Q9H8V3 914 aa10.48□□□□□ -0.73
SMARCAL1-213ENST00000496037 PRDM16Q9HAZ2 1276 aa10.48□□□□□ -0.73
SMARCAL1-213ENST00000496037 SUSD2Q9UGT4 822 aa10.48□□□□□ -0.73
SMARCAL1-213ENST00000496037 CCL26Q9Y258 94 aa10.48□□□□□ -0.73
SMARCAL1-213ENST00000496037 MGAQ8IWI9 3026 aa10.47□□□□□ -0.73
SMARCAL1-213ENST00000496037 KIAA1549LQ6ZVL6 1849 aa10.47□□□□□ -0.73
SMARCAL1-213ENST00000496037 A0A1W2PQD8 194 aa10.47□□□□□ -0.73
SMARCAL1-213ENST00000496037 ATP9BO43861 1147 aa10.47□□□□□ -0.73
SMARCAL1-213ENST00000496037 DGAT1O75907 488 aa10.47□□□□□ -0.73
SMARCAL1-213ENST00000496037 OR4Q2P0C623 313 aa10.47□□□□□ -0.73
SMARCAL1-213ENST00000496037 GNSP15586 552 aa10.47□□□□□ -0.73
SMARCAL1-213ENST00000496037 IFNAR2P48551 515 aa10.47□□□□□ -0.73
SMARCAL1-213ENST00000496037 YARSP54577 528 aaKnown RBP10.47□□□□□ -0.73
SMARCAL1-213ENST00000496037 SEMG2Q02383 582 aa10.47□□□□□ -0.73
SMARCAL1-213ENST00000496037 YWHAHQ04917 246 aaPredicted RBP10.47□□□□□ -0.73
SMARCAL1-213ENST00000496037 SOX4Q06945 474 aaPredicted RBP10.47□□□□□ -0.73
SMARCAL1-213ENST00000496037 GRIK2Q13002 908 aa10.47□□□□□ -0.73
SMARCAL1-213ENST00000496037 NR1H3Q13133 447 aa10.47□□□□□ -0.73
SMARCAL1-213ENST00000496037 PPP2R5CQ13362 524 aa10.47□□□□□ -0.73
SMARCAL1-213ENST00000496037 PREPLQ4J6C6 727 aaPredicted RBP10.47□□□□□ -0.73
SMARCAL1-213ENST00000496037 APBB1IPQ7Z5R6 666 aaPredicted RBP10.47□□□□□ -0.73
SMARCAL1-213ENST00000496037 TBCKQ8TEA7 893 aa10.47□□□□□ -0.73
SMARCAL1-213ENST00000496037 ATP2A3Q93084 1043 aa10.47□□□□□ -0.73
SMARCAL1-213ENST00000496037 SUSD3Q96L08 255 aa10.47□□□□□ -0.73
SMARCAL1-213ENST00000496037 SLC46A2Q9BY10 475 aa10.47□□□□□ -0.73
SMARCAL1-213ENST00000496037 OXCT2Q9BYC2 517 aaPredicted RBP10.47□□□□□ -0.73
SMARCAL1-213ENST00000496037 C22orf23Q9BZE7 217 aa10.47□□□□□ -0.73
SMARCAL1-213ENST00000496037 ZDHHC5Q9C0B5 715 aa10.47□□□□□ -0.73
SMARCAL1-213ENST00000496037 POLR3FQ9H1D9 316 aaPredicted RBP10.47□□□□□ -0.73
SMARCAL1-213ENST00000496037 C2orf40Q9H1Z8 148 aa10.47□□□□□ -0.73
SMARCAL1-213ENST00000496037 FAM124BQ9H5Z6 455 aaPredicted RBP10.47□□□□□ -0.73
SMARCAL1-213ENST00000496037 ZSWIM4Q9H7M6 989 aa10.47□□□□□ -0.73
SMARCAL1-213ENST00000496037 TOPORSQ9NS56 1045 aaPredicted RBP10.47□□□□□ -0.73
SMARCAL1-213ENST00000496037 TDP1Q9NUW8 608 aa10.47□□□□□ -0.73
SMARCAL1-213ENST00000496037 RBM8AQ9Y5S9 174 aaKnown RBP10.47□□□□□ -0.73
SMARCAL1-213ENST00000496037 PI4KAP42356 2102 aa10.46□□□□□ -0.73
SMARCAL1-213ENST00000496037 MYO9AB2RTY4 2548 aa10.46□□□□□ -0.73
SMARCAL1-213ENST00000496037 SMIM28A0A1B0GU29 152 aa10.46□□□□□ -0.73
SMARCAL1-213ENST00000496037 PLK4O00444 970 aa10.46□□□□□ -0.73
SMARCAL1-213ENST00000496037 EDIL3O43854 480 aa10.46□□□□□ -0.73
SMARCAL1-213ENST00000496037 ATXN1LP0C7T5 689 aaKnown RBP10.46□□□□□ -0.73
SMARCAL1-213ENST00000496037 C6P13671 934 aa10.46□□□□□ -0.73
SMARCAL1-213ENST00000496037 LIG1P18858 919 aa10.46□□□□□ -0.73
SMARCAL1-213ENST00000496037 DDX6P26196 483 aaKnown RBP eCLIP10.46□□□□□ -0.73
SMARCAL1-213ENST00000496037 MRPS21P82921 87 aaKnown RBP10.46□□□□□ -0.73
SMARCAL1-213ENST00000496037 RHDQ02161 417 aa10.46□□□□□ -0.73
SMARCAL1-213ENST00000496037 MTF1Q14872 753 aa10.46□□□□□ -0.73
SMARCAL1-213ENST00000496037 FAM187BQ17R55 369 aa10.46□□□□□ -0.73
SMARCAL1-213ENST00000496037 C6orf118Q5T5N4 469 aa10.46□□□□□ -0.73
SMARCAL1-213ENST00000496037 BRICD5Q6PL45 260 aa10.46□□□□□ -0.73
SMARCAL1-213ENST00000496037 FMNL3Q8IVF7 1028 aa10.46□□□□□ -0.73
SMARCAL1-213ENST00000496037 RGL4Q8IZJ4 473 aa10.46□□□□□ -0.73
SMARCAL1-213ENST00000496037 MAB21L3Q8N8X9 362 aa10.46□□□□□ -0.73
SMARCAL1-213ENST00000496037 TXNDC5Q8NBS9 432 aaKnown RBP10.46□□□□□ -0.73
SMARCAL1-213ENST00000496037 TTC16Q8NEE8 873 aa10.46□□□□□ -0.73
SMARCAL1-213ENST00000496037 USP13Q92995 863 aaPredicted RBP10.46□□□□□ -0.73
SMARCAL1-213ENST00000496037 WBP1Q96G27 269 aa10.46□□□□□ -0.73
SMARCAL1-213ENST00000496037 HSPA12BQ96MM6 686 aa10.46□□□□□ -0.73
SMARCAL1-213ENST00000496037 CRISPLD1Q9H336 500 aa10.46□□□□□ -0.73
SMARCAL1-213ENST00000496037 FZD8Q9H461 694 aa10.46□□□□□ -0.73
SMARCAL1-213ENST00000496037 DUS2Q9NX74 493 aaKnown RBP10.46□□□□□ -0.73
SMARCAL1-213ENST00000496037 TOR4AQ9NXH8 423 aa10.46□□□□□ -0.73
SMARCAL1-213ENST00000496037 DDX25Q9UHL0 483 aaKnown RBP10.46□□□□□ -0.73
SMARCAL1-213ENST00000496037 VAV3Q9UKW4 847 aa10.46□□□□□ -0.73
SMARCAL1-213ENST00000496037 MYO16Q9Y6X6 1858 aa10.45□□□□□ -0.74
SMARCAL1-213ENST00000496037 CYP3A7-CYP3A51PA0A087WV96 503 aa10.45□□□□□ -0.74
SMARCAL1-213ENST00000496037 TCRBV21S2A2A0A5A6 115 aa10.45□□□□□ -0.74
SMARCAL1-213ENST00000496037 OR6C75A6NL08 312 aa10.45□□□□□ -0.74
SMARCAL1-213ENST00000496037 K7EQS6 105 aa10.45□□□□□ -0.74
SMARCAL1-213ENST00000496037 TLX3O43711 291 aaPredicted RBP10.45□□□□□ -0.74
SMARCAL1-213ENST00000496037 SOAT2O75908 522 aa10.45□□□□□ -0.74
SMARCAL1-213ENST00000496037 DKK1O94907 266 aa10.45□□□□□ -0.74
SMARCAL1-213ENST00000496037 VNN2O95498 520 aa10.45□□□□□ -0.74
SMARCAL1-213ENST00000496037 HNRNPLP14866 589 aaKnown RBP eCLIP10.45□□□□□ -0.74
SMARCAL1-213ENST00000496037 CYP3A7P24462 503 aa10.45□□□□□ -0.74
SMARCAL1-213ENST00000496037 RPL9P32969 192 aaKnown RBP10.45□□□□□ -0.74
SMARCAL1-213ENST00000496037 AKAP17AQ02040 695 aaKnown RBP10.45□□□□□ -0.74
SMARCAL1-213ENST00000496037 HDAC1Q13547 482 aaPredicted RBP10.45□□□□□ -0.74
SMARCAL1-213ENST00000496037 CTTNQ14247 550 aaKnown RBP10.45□□□□□ -0.74
SMARCAL1-213ENST00000496037 EPHA7Q15375 998 aa10.45□□□□□ -0.74
SMARCAL1-213ENST00000496037 SMAD1Q15797 465 aaKnown RBP10.45□□□□□ -0.74
SMARCAL1-213ENST00000496037 HSF5Q4G112 596 aaPredicted RBP10.45□□□□□ -0.74
SMARCAL1-213ENST00000496037 CCDC157Q569K6 752 aa10.45□□□□□ -0.74
SMARCAL1-213ENST00000496037 COLEC12Q5KU26 742 aa10.45□□□□□ -0.74
SMARCAL1-213ENST00000496037 EOGTQ5NDL2 527 aa10.45□□□□□ -0.74
SMARCAL1-213ENST00000496037 CDCA2Q69YH5 1023 aaPredicted RBP10.45□□□□□ -0.74
SMARCAL1-213ENST00000496037 CENPPQ6IPU0 288 aa10.45□□□□□ -0.74
SMARCAL1-213ENST00000496037 PRICKLE2Q7Z3G6 844 aa10.45□□□□□ -0.74
SMARCAL1-213ENST00000496037 USP37Q86T82 979 aa10.45□□□□□ -0.74
SMARCAL1-213ENST00000496037 ALLCQ8N6M5 410 aa10.45□□□□□ -0.74
SMARCAL1-213ENST00000496037 TRIML1Q8N9V2 468 aa10.45□□□□□ -0.74
SMARCAL1-213ENST00000496037 RHBDD1Q8TEB9 315 aa10.45□□□□□ -0.74
SMARCAL1-213ENST00000496037 OSCP1Q8WVF1 389 aa10.45□□□□□ -0.74
SMARCAL1-213ENST00000496037 IRX2Q9BZI1 471 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms