RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 PTPRAP18433 802 aa13.67□□□□□ -0.22
PTPN7-217ENST00000495688 RPL22P35268 128 aaKnown RBP13.67□□□□□ -0.22
PTPN7-217ENST00000495688 SLC25A11Q02978 314 aaKnown RBP13.67□□□□□ -0.22
PTPN7-217ENST00000495688 TNFAIP1Q13829 316 aa13.67□□□□□ -0.22
PTPN7-217ENST00000495688 PIGHQ14442 188 aaPredicted RBP13.67□□□□□ -0.22
PTPN7-217ENST00000495688 TAF1BQ53T94 588 aaPredicted RBP13.67□□□□□ -0.22
PTPN7-217ENST00000495688 EFHC2Q5JST6 749 aa13.67□□□□□ -0.22
PTPN7-217ENST00000495688 RGS9BPQ6ZS82 235 aa13.67□□□□□ -0.22
PTPN7-217ENST00000495688 CEP128Q6ZU80 1094 aa13.67□□□□□ -0.22
PTPN7-217ENST00000495688 CEP120Q8N960 986 aa13.67□□□□□ -0.22
PTPN7-217ENST00000495688 FBXO36Q8NEA4 188 aa13.67□□□□□ -0.22
PTPN7-217ENST00000495688 PTPRN2Q92932 1015 aa13.67□□□□□ -0.22
PTPN7-217ENST00000495688 PAFAH2Q99487 392 aa13.67□□□□□ -0.22
PTPN7-217ENST00000495688 TBC1D10AQ9BXI6 508 aa13.67□□□□□ -0.22
PTPN7-217ENST00000495688 TEX13BQ9BXU2 312 aa13.67□□□□□ -0.22
PTPN7-217ENST00000495688 NIF3L1Q9GZT8 377 aa13.67□□□□□ -0.22
PTPN7-217ENST00000495688 LRMDAQ9H2I8 198 aa13.67□□□□□ -0.22
PTPN7-217ENST00000495688 ACAD9Q9H845 621 aa13.67□□□□□ -0.22
PTPN7-217ENST00000495688 NXF1Q9UBU9 619 aaKnown RBP13.67□□□□□ -0.22
PTPN7-217ENST00000495688 ZMYND8Q9ULU4 1186 aaPredicted RBP13.67□□□□□ -0.22
PTPN7-217ENST00000495688 POLIQ9UNA4 740 aa13.67□□□□□ -0.22
PTPN7-217ENST00000495688 CEP83Q9Y592 693 aa13.67□□□□□ -0.22
PTPN7-217ENST00000495688 ATP2A1O14983 1001 aa13.67□□□□□ -0.22
PTPN7-217ENST00000495688 ADCY3O60266 1144 aa13.67□□□□□ -0.22
PTPN7-217ENST00000495688 CD19P15391 556 aa13.67□□□□□ -0.22
PTPN7-217ENST00000495688 ATP2A2P16615 1042 aaKnown RBP13.67□□□□□ -0.22
PTPN7-217ENST00000495688 EN1Q05925 392 aaPredicted RBP13.67□□□□□ -0.22
PTPN7-217ENST00000495688 ANKRD20A2Q5SQ80 823 aa13.67□□□□□ -0.22
PTPN7-217ENST00000495688 ANKRD20A1Q5TYW2 823 aa13.67□□□□□ -0.22
PTPN7-217ENST00000495688 ANKRD20A3Q5VUR7 823 aa13.67□□□□□ -0.22
PTPN7-217ENST00000495688 MTDHQ86UE4 582 aaKnown RBP13.67□□□□□ -0.22
PTPN7-217ENST00000495688 FAM13CQ8NE31 585 aa13.67□□□□□ -0.22
PTPN7-217ENST00000495688 TCP10LQ8TDR4 215 aa13.67□□□□□ -0.22
PTPN7-217ENST00000495688 SLC5A4Q9NY91 659 aa13.67□□□□□ -0.22
PTPN7-217ENST00000495688 SNCAIPQ9Y6H5 919 aa13.67□□□□□ -0.22
PTPN7-217ENST00000495688 MSCO60682 206 aa13.67□□□□□ -0.22
PTPN7-217ENST00000495688 LSM8O95777 96 aaKnown RBP13.67□□□□□ -0.22
PTPN7-217ENST00000495688 KRT3P12035 628 aa13.67□□□□□ -0.22
PTPN7-217ENST00000495688 MARK3P27448 753 aa13.67□□□□□ -0.22
PTPN7-217ENST00000495688 CDH8P55286 799 aa13.67□□□□□ -0.22
PTPN7-217ENST00000495688 BBS9Q3SYG4 887 aa13.67□□□□□ -0.22
PTPN7-217ENST00000495688 EEPD1Q7L9B9 569 aa13.67□□□□□ -0.22
PTPN7-217ENST00000495688 WDR49Q8IV35 697 aa13.67□□□□□ -0.22
PTPN7-217ENST00000495688 IGDCC3Q8IVU1 814 aa13.67□□□□□ -0.22
PTPN7-217ENST00000495688 ZNF276Q8N554 614 aa13.67□□□□□ -0.22
PTPN7-217ENST00000495688 NAT8LQ8N9F0 302 aa13.67□□□□□ -0.22
PTPN7-217ENST00000495688 FAM71DQ8N9W8 422 aa13.67□□□□□ -0.22
PTPN7-217ENST00000495688 RFWD2Q8NHY2 731 aa13.67□□□□□ -0.22
PTPN7-217ENST00000495688 SENP1Q9P0U3 644 aa13.67□□□□□ -0.22
PTPN7-217ENST00000495688 SLC24A2Q9UI40 661 aa13.67□□□□□ -0.22
PTPN7-217ENST00000495688 ADAMTS5Q9UNA0 930 aa13.67□□□□□ -0.22
PTPN7-217ENST00000495688 STAM2O75886 525 aa13.66□□□□□ -0.22
PTPN7-217ENST00000495688 ATG7O95352 703 aa13.66□□□□□ -0.22
PTPN7-217ENST00000495688 GJB1P08034 283 aa13.66□□□□□ -0.22
PTPN7-217ENST00000495688 ABCD1P33897 745 aa13.66□□□□□ -0.22
PTPN7-217ENST00000495688 ASPAP45381 313 aa13.66□□□□□ -0.22
PTPN7-217ENST00000495688 SLC18A1P54219 525 aa13.66□□□□□ -0.22
PTPN7-217ENST00000495688 STXBP2Q15833 593 aa13.66□□□□□ -0.22
PTPN7-217ENST00000495688 BZW1Q7L1Q6 419 aaKnown RBP13.66□□□□□ -0.22
PTPN7-217ENST00000495688 NLRP9Q7RTR0 991 aa13.66□□□□□ -0.22
PTPN7-217ENST00000495688 CCDC125Q86Z20 511 aa13.66□□□□□ -0.22
PTPN7-217ENST00000495688 PPIL6Q8IXY8 311 aa13.66□□□□□ -0.22
PTPN7-217ENST00000495688 THNSL1Q8IYQ7 743 aa13.66□□□□□ -0.22
PTPN7-217ENST00000495688 SCYL3Q8IZE3 742 aa13.66□□□□□ -0.22
PTPN7-217ENST00000495688 LRRC71Q8N4P6 559 aa13.66□□□□□ -0.22
PTPN7-217ENST00000495688 MZB1Q8WU39 189 aa13.66□□□□□ -0.22
PTPN7-217ENST00000495688 ZBTB10Q96DT7 871 aa13.66□□□□□ -0.22
PTPN7-217ENST00000495688 CYLDQ9NQC7 956 aa13.66□□□□□ -0.22
PTPN7-217ENST00000495688 KANSL3Q9P2N6 904 aa13.66□□□□□ -0.22
PTPN7-217ENST00000495688 LCTP09848 1927 aa13.66□□□□□ -0.22
PTPN7-217ENST00000495688 PHIPQ8WWQ0 1821 aa13.66□□□□□ -0.22
PTPN7-217ENST00000495688 UBA1P22314 1058 aaKnown RBP13.66□□□□□ -0.22
PTPN7-217ENST00000495688 PAX7P23759 505 aa13.66□□□□□ -0.22
PTPN7-217ENST00000495688 PTPN7P35236 360 aa13.66□□□□□ -0.22
PTPN7-217ENST00000495688 TRPC3Q13507 836 aa13.66□□□□□ -0.22
PTPN7-217ENST00000495688 ZNF699Q32M78 642 aa13.66□□□□□ -0.22
PTPN7-217ENST00000495688 LONP2Q86WA8 852 aa13.66□□□□□ -0.22
PTPN7-217ENST00000495688 TRIM50Q86XT4 487 aa13.66□□□□□ -0.22
PTPN7-217ENST00000495688 RSAD2Q8WXG1 361 aa13.66□□□□□ -0.22
PTPN7-217ENST00000495688 RAB3IPQ96QF0 476 aaPredicted RBP13.66□□□□□ -0.22
PTPN7-217ENST00000495688 CPXM1Q96SM3 734 aa13.66□□□□□ -0.22
PTPN7-217ENST00000495688 XYLT2Q9H1B5 865 aa13.66□□□□□ -0.22
PTPN7-217ENST00000495688 GINM1Q9NU53 330 aa13.66□□□□□ -0.22
PTPN7-217ENST00000495688 DDX56Q9NY93 547 aaKnown RBP13.66□□□□□ -0.22
PTPN7-217ENST00000495688 CHMP2BQ9UQN3 213 aa13.66□□□□□ -0.22
PTPN7-217ENST00000495688 SIP14410 1827 aa13.65□□□□□ -0.22
PTPN7-217ENST00000495688 H0Y3Z8 333 aa13.65□□□□□ -0.22
PTPN7-217ENST00000495688 ENTPD5O75356 428 aa13.65□□□□□ -0.22
PTPN7-217ENST00000495688 DCTN3O75935 186 aa13.65□□□□□ -0.22
PTPN7-217ENST00000495688 EIF4BP23588 611 aaKnown RBP13.65□□□□□ -0.22
PTPN7-217ENST00000495688 KDELR1P24390 212 aa13.65□□□□□ -0.22
PTPN7-217ENST00000495688 ALDH3A1P30838 453 aa13.65□□□□□ -0.22
PTPN7-217ENST00000495688 ARL4CP56559 192 aa13.65□□□□□ -0.22
PTPN7-217ENST00000495688 PSMC1P62191 440 aaKnown RBP13.65□□□□□ -0.22
PTPN7-217ENST00000495688 BASP1P80723 227 aaKnown RBP13.65□□□□□ -0.22
PTPN7-217ENST00000495688 TARBP2Q15633 366 aaKnown RBP13.65□□□□□ -0.22
PTPN7-217ENST00000495688 DUOXA2Q1HG44 320 aa13.65□□□□□ -0.22
PTPN7-217ENST00000495688 RAB6CQ53S08 254 aa13.65□□□□□ -0.22
PTPN7-217ENST00000495688 NIPA2Q8N8Q9 360 aa13.65□□□□□ -0.22
PTPN7-217ENST00000495688 ATP11CQ8NB49 1132 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms