RNA–Protein interactions for RNA: ENST00000495039.1

VPS50-219, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-219ENST00000495039 IARSP41252 1262 aaKnown RBP5.15□□□□□ -1.59
VPS50-219ENST00000495039 FXR1P51114 621 aaKnown RBP eCLIP5.15□□□□□ -1.59
VPS50-219ENST00000495039 INAVAQ3KP66 663 aa5.15□□□□□ -1.59
VPS50-219ENST00000495039 IRF2BP2Q7Z5L9 587 aa5.15□□□□□ -1.59
VPS50-219ENST00000495039 GALNT4Q8N4A0 578 aa5.15□□□□□ -1.59
VPS50-219ENST00000495039 CNTD1Q8N815 330 aa5.15□□□□□ -1.59
VPS50-219ENST00000495039 KLHL13Q9P2N7 655 aa5.15□□□□□ -1.59
VPS50-219ENST00000495039 ZDHHC8Q9ULC8 765 aa5.15□□□□□ -1.59
VPS50-219ENST00000495039 FAM90A10PA6NDY2 464 aa5.14□□□□□ -1.59
VPS50-219ENST00000495039 XPOTO43592 962 aaKnown RBP5.14□□□□□ -1.59
VPS50-219ENST00000495039 ARIH2O95376 493 aa5.14□□□□□ -1.59
VPS50-219ENST00000495039 FESP07332 822 aa5.14□□□□□ -1.59
VPS50-219ENST00000495039 CHRM5P08912 532 aaPredicted RBP5.14□□□□□ -1.59
VPS50-219ENST00000495039 HSD3B2P26439 372 aa5.14□□□□□ -1.59
VPS50-219ENST00000495039 IL1R2P27930 398 aa5.14□□□□□ -1.59
VPS50-219ENST00000495039 PRDX5P30044 214 aa5.14□□□□□ -1.59
VPS50-219ENST00000495039 PHKA1P46020 1223 aa5.14□□□□□ -1.59
VPS50-219ENST00000495039 LCE1EQ5T753 118 aa5.14□□□□□ -1.59
VPS50-219ENST00000495039 KIRREL2Q6UWL6 708 aa5.14□□□□□ -1.59
VPS50-219ENST00000495039 USP37Q86T82 979 aa5.14□□□□□ -1.59
VPS50-219ENST00000495039 FAM90A1Q86YD7 464 aa5.14□□□□□ -1.59
VPS50-219ENST00000495039 C16orf52Q8NHV5 167 aa5.14□□□□□ -1.59
VPS50-219ENST00000495039 COQ8BQ96D53 544 aa5.14□□□□□ -1.59
VPS50-219ENST00000495039 ZC3H10Q96K80 434 aaKnown RBP5.14□□□□□ -1.59
VPS50-219ENST00000495039 MARK4Q96L34 752 aa5.14□□□□□ -1.59
VPS50-219ENST00000495039 C1orf43Q9BWL3 253 aa5.14□□□□□ -1.59
VPS50-219ENST00000495039 PUS7LQ9H0K6 701 aaKnown RBP5.14□□□□□ -1.59
VPS50-219ENST00000495039 GLOD4Q9HC38 313 aa5.14□□□□□ -1.59
VPS50-219ENST00000495039 SERTAD3Q9UJW9 196 aa5.14□□□□□ -1.59
VPS50-219ENST00000495039 POLHQ9Y253 713 aa5.14□□□□□ -1.59
VPS50-219ENST00000495039 PHLDB1Q86UU1 1377 aa5.14□□□□□ -1.59
VPS50-219ENST00000495039 M0QYG6 137 aa5.13□□□□□ -1.59
VPS50-219ENST00000495039 IGSF3O75054 1194 aa5.13□□□□□ -1.59
VPS50-219ENST00000495039 TMEM191BP0C7N4 346 aa5.13□□□□□ -1.59
VPS50-219ENST00000495039 ATP5F1P24539 256 aaPredicted RBP5.13□□□□□ -1.59
VPS50-219ENST00000495039 PPIFP30405 207 aaKnown RBP5.13□□□□□ -1.59
VPS50-219ENST00000495039 TPTEP56180 551 aa5.13□□□□□ -1.59
VPS50-219ENST00000495039 LOXL3P58215 753 aa5.13□□□□□ -1.59
VPS50-219ENST00000495039 BOP1Q14137 746 aaKnown RBP5.13□□□□□ -1.59
VPS50-219ENST00000495039 TBC1D25Q3MII6 688 aa5.13□□□□□ -1.59
VPS50-219ENST00000495039 FAM160B1Q5W0V3 765 aa5.13□□□□□ -1.59
VPS50-219ENST00000495039 FCRL6Q6DN72 434 aa5.13□□□□□ -1.59
VPS50-219ENST00000495039 LAYNQ6UX15 382 aa5.13□□□□□ -1.59
VPS50-219ENST00000495039 CBARPQ8N350 705 aaPredicted RBP5.13□□□□□ -1.59
VPS50-219ENST00000495039 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.13□□□□□ -1.59
VPS50-219ENST00000495039 SMRP1Q8NCR6 262 aa5.13□□□□□ -1.59
VPS50-219ENST00000495039 C3orf20Q8ND61 904 aa5.13□□□□□ -1.59
VPS50-219ENST00000495039 CUL5Q93034 780 aa5.13□□□□□ -1.59
VPS50-219ENST00000495039 FAXDC2Q96IV6 333 aa5.13□□□□□ -1.59
VPS50-219ENST00000495039 CCNL1Q9UK58 526 aaPredicted RBP5.13□□□□□ -1.59
VPS50-219ENST00000495039 UBE2Q2LH0YL09 131 aa5.12□□□□□ -1.59
VPS50-219ENST00000495039 TJP3O95049 919 aa5.12□□□□□ -1.59
VPS50-219ENST00000495039 MT-CO1P00395 513 aa5.12□□□□□ -1.59
VPS50-219ENST00000495039 GPSM2P81274 684 aa5.12□□□□□ -1.59
VPS50-219ENST00000495039 HTRA4P83105 476 aaPredicted RBP5.12□□□□□ -1.59
VPS50-219ENST00000495039 DSC2Q02487 901 aa5.12□□□□□ -1.59
VPS50-219ENST00000495039 UAP1L1Q3KQV9 507 aa5.12□□□□□ -1.59
VPS50-219ENST00000495039 MEPCEQ7L2J0 689 aaKnown RBP5.12□□□□□ -1.59
VPS50-219ENST00000495039 FAM46DQ8NEK8 389 aa5.12□□□□□ -1.59
VPS50-219ENST00000495039 ABHD11Q8NFV4 315 aa5.12□□□□□ -1.59
VPS50-219ENST00000495039 ATG4AQ8WYN0 398 aa5.12□□□□□ -1.59
VPS50-219ENST00000495039 TNPO1Q92973 898 aaKnown RBP5.12□□□□□ -1.59
VPS50-219ENST00000495039 VCPIP1Q96JH7 1222 aa5.12□□□□□ -1.59
VPS50-219ENST00000495039 SLC46A1Q96NT5 459 aa5.12□□□□□ -1.59
VPS50-219ENST00000495039 WDCPQ9H6R7 721 aa5.12□□□□□ -1.59
VPS50-219ENST00000495039 SCAF8Q9UPN6 1271 aaKnown RBP5.12□□□□□ -1.59
VPS50-219ENST00000495039 MRFAP1Q9Y605 127 aa5.12□□□□□ -1.59
VPS50-219ENST00000495039 A1L4Q6 167 aa5.11□□□□□ -1.59
VPS50-219ENST00000495039 OAZ2O95190 189 aa5.11□□□□□ -1.59
VPS50-219ENST00000495039 ATXN1LP0C7T5 689 aaKnown RBP5.11□□□□□ -1.59
VPS50-219ENST00000495039 CYP2A6P11509 494 aaPredicted RBP5.11□□□□□ -1.59
VPS50-219ENST00000495039 SP2Q02086 613 aa5.11□□□□□ -1.59
VPS50-219ENST00000495039 ZNF268Q14587 947 aaPredicted RBP5.11□□□□□ -1.59
VPS50-219ENST00000495039 ARHGAP40Q5TG30 622 aa5.11□□□□□ -1.59
VPS50-219ENST00000495039 MTHFD1LQ6UB35 978 aa5.11□□□□□ -1.59
VPS50-219ENST00000495039 Q6ZWC4 215 aa5.11□□□□□ -1.59
VPS50-219ENST00000495039 XAGE5Q8WWM1 108 aa5.11□□□□□ -1.59
VPS50-219ENST00000495039 GLG1Q92896 1179 aa5.11□□□□□ -1.59
VPS50-219ENST00000495039 TEKT5Q96M29 485 aa5.11□□□□□ -1.59
VPS50-219ENST00000495039 SNX18Q96RF0 628 aa5.11□□□□□ -1.59
VPS50-219ENST00000495039 PTDSS2Q9BVG9 487 aa5.11□□□□□ -1.59
VPS50-219ENST00000495039 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.11□□□□□ -1.59
VPS50-219ENST00000495039 SLC5A4Q9NY91 659 aa5.11□□□□□ -1.59
VPS50-219ENST00000495039 HESX1Q9UBX0 185 aa5.11□□□□□ -1.59
VPS50-219ENST00000495039 SERPINB13Q9UIV8 391 aa5.11□□□□□ -1.59
VPS50-219ENST00000495039 SSX2IPQ9Y2D8 614 aa5.11□□□□□ -1.59
VPS50-219ENST00000495039 CACNA1IQ9P0X4 2223 aa5.11□□□□□ -1.59
VPS50-219ENST00000495039 LRRC14BA6NHZ5 514 aa5.1□□□□□ -1.59
VPS50-219ENST00000495039 FCHO1O14526 889 aa5.1□□□□□ -1.59
VPS50-219ENST00000495039 DSCR3O14972 297 aa5.1□□□□□ -1.59
VPS50-219ENST00000495039 PCDHGA12O60330 932 aa5.1□□□□□ -1.59
VPS50-219ENST00000495039 EXOC3O60645 756 aa5.1□□□□□ -1.59
VPS50-219ENST00000495039 PIM1P11309 404 aaPredicted RBP5.1□□□□□ -1.59
VPS50-219ENST00000495039 PXNP49023 591 aaPredicted RBP5.1□□□□□ -1.59
VPS50-219ENST00000495039 RBMS2Q15434 407 aaKnown RBP5.1□□□□□ -1.59
VPS50-219ENST00000495039 LONRF3Q496Y0 759 aa5.1□□□□□ -1.59
VPS50-219ENST00000495039 SERPINA13PQ6UXR4 307 aa5.1□□□□□ -1.59
VPS50-219ENST00000495039 ZNF813Q6ZN06 617 aa5.1□□□□□ -1.59
VPS50-219ENST00000495039 NECAB2Q7Z6G3 386 aa5.1□□□□□ -1.59
VPS50-219ENST00000495039 CPA6Q8N4T0 437 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms