RNA–Protein interactions for RNA: ENST00000494891.5

NEPRO-222, Transcript of nucleolus and neural progenitor protein, human

TSL 4

Gene NEPRO, Length 547 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-222	ENST00000494891	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	10.99	□□□□□ -0.65
NEPRO-222	ENST00000494891	MYBPHL	A2RUH7	354 aa		10.99	□□□□□ -0.65
NEPRO-222	ENST00000494891	HEPACAM2	A8MVW5	462 aa		10.99	□□□□□ -0.65
NEPRO-222	ENST00000494891	VNN1	O95497	513 aa		10.99	□□□□□ -0.65
NEPRO-222	ENST00000494891	PFKL	P17858	780 aa		10.99	□□□□□ -0.65
NEPRO-222	ENST00000494891	ACAT1	P24752	427 aa	Known RBP	10.99	□□□□□ -0.65
NEPRO-222	ENST00000494891	CYP2F1	P24903	491 aa		10.99	□□□□□ -0.65
NEPRO-222	ENST00000494891	LMO2	P25791	158 aa		10.99	□□□□□ -0.65
NEPRO-222	ENST00000494891	GNL1	P36915	607 aa	Predicted RBP	10.99	□□□□□ -0.65
NEPRO-222	ENST00000494891	NBL1	P41271	181 aa		10.99	□□□□□ -0.65
NEPRO-222	ENST00000494891	RPS9	P46781	194 aa	Known RBP	10.99	□□□□□ -0.65
NEPRO-222	ENST00000494891	CASP4	P49662	377 aa		10.99	□□□□□ -0.65
NEPRO-222	ENST00000494891	NLRP12	P59046	1061 aa		10.99	□□□□□ -0.65
NEPRO-222	ENST00000494891	MYL6	P60660	151 aa		10.99	□□□□□ -0.65
NEPRO-222	ENST00000494891	TRPC3	Q13507	836 aa		10.99	□□□□□ -0.65
NEPRO-222	ENST00000494891	NCOA4	Q13772	614 aa		10.99	□□□□□ -0.65
NEPRO-222	ENST00000494891	ZNF268	Q14587	947 aa	Predicted RBP	10.99	□□□□□ -0.65
NEPRO-222	ENST00000494891	SGSM1	Q2NKQ1	1148 aa		10.99	□□□□□ -0.65
NEPRO-222	ENST00000494891	C1orf220	Q5T0J3	134 aa		10.99	□□□□□ -0.65
NEPRO-222	ENST00000494891	MAMSTR	Q6ZN01	415 aa		10.99	□□□□□ -0.65
NEPRO-222	ENST00000494891	SPATA2L	Q8IUW3	424 aa	Predicted RBP	10.99	□□□□□ -0.65
NEPRO-222	ENST00000494891	ARID3B	Q8IVW6	561 aa	Predicted RBP	10.99	□□□□□ -0.65
NEPRO-222	ENST00000494891	ZNF687	Q8N1G0	1237 aa		10.99	□□□□□ -0.65
NEPRO-222	ENST00000494891	KIAA1958	Q8N8K9	716 aa		10.99	□□□□□ -0.65
NEPRO-222	ENST00000494891	PI4K2A	Q9BTU6	479 aa		10.99	□□□□□ -0.65
NEPRO-222	ENST00000494891	ATXN3L	Q9H3M9	355 aa		10.99	□□□□□ -0.65
NEPRO-222	ENST00000494891	CRTAC1	Q9NQ79	661 aa		10.99	□□□□□ -0.65
NEPRO-222	ENST00000494891	MYO15A	Q9UKN7	3530 aa		10.99	□□□□□ -0.65
NEPRO-222	ENST00000494891	MIA3	Q5JRA6	1907 aa		10.99	□□□□□ -0.65
NEPRO-222	ENST00000494891	DMD	P11532	3685 aa		10.98	□□□□□ -0.65
NEPRO-222	ENST00000494891	GOLGA6L4	A6NEF3	574 aa		10.98	□□□□□ -0.65
NEPRO-222	ENST00000494891	MAN2B1	O00754	1011 aa		10.98	□□□□□ -0.65
NEPRO-222	ENST00000494891	AKAP3	O75969	853 aa		10.98	□□□□□ -0.65
NEPRO-222	ENST00000494891	ASS1	P00966	412 aa	Known RBP	10.98	□□□□□ -0.65
NEPRO-222	ENST00000494891	TCF3	P15923	654 aa		10.98	□□□□□ -0.65
NEPRO-222	ENST00000494891	GJA1	P17302	382 aa		10.98	□□□□□ -0.65
NEPRO-222	ENST00000494891	NR2F2	P24468	414 aa		10.98	□□□□□ -0.65
NEPRO-222	ENST00000494891	GTF2H1	P32780	548 aa		10.98	□□□□□ -0.65
NEPRO-222	ENST00000494891	VIPR2	P41587	438 aa		10.98	□□□□□ -0.65
NEPRO-222	ENST00000494891	TNNC1	P63316	161 aa		10.98	□□□□□ -0.65
NEPRO-222	ENST00000494891	NOP14	P78316	857 aa	Known RBP	10.98	□□□□□ -0.65
NEPRO-222	ENST00000494891	PLCB2	Q00722	1185 aa		10.98	□□□□□ -0.65
NEPRO-222	ENST00000494891	ARHGAP29	Q52LW3	1261 aa		10.98	□□□□□ -0.65
NEPRO-222	ENST00000494891	STXBP5	Q5T5C0	1151 aa		10.98	□□□□□ -0.65
NEPRO-222	ENST00000494891	GPR158	Q5T848	1215 aa		10.98	□□□□□ -0.65
NEPRO-222	ENST00000494891	ZNF658	Q5TYW1	1059 aa	Predicted RBP	10.98	□□□□□ -0.65
NEPRO-222	ENST00000494891	FOXR2	Q6PJQ5	311 aa		10.98	□□□□□ -0.65
NEPRO-222	ENST00000494891	ZNF852	Q6ZMS4	543 aa		10.98	□□□□□ -0.65
NEPRO-222	ENST00000494891	SV2A	Q7L0J3	742 aa		10.98	□□□□□ -0.65
NEPRO-222	ENST00000494891	MON1A	Q86VX9	555 aa		10.98	□□□□□ -0.65
NEPRO-222	ENST00000494891	ZC3H3	Q8IXZ2	948 aa	Known RBP	10.98	□□□□□ -0.65
NEPRO-222	ENST00000494891	CMTM8	Q8IZV2	173 aa		10.98	□□□□□ -0.65
NEPRO-222	ENST00000494891	FAM200A	Q8TCP9	573 aa		10.98	□□□□□ -0.65
NEPRO-222	ENST00000494891	PCED1B	Q96HM7	432 aa		10.98	□□□□□ -0.65
NEPRO-222	ENST00000494891	C8orf48	Q96LL4	319 aa		10.98	□□□□□ -0.65
NEPRO-222	ENST00000494891	GCNA	Q96QF7	691 aa		10.98	□□□□□ -0.65
NEPRO-222	ENST00000494891	MMS19	Q96T76	1030 aa		10.98	□□□□□ -0.65
NEPRO-222	ENST00000494891	MRPL45	Q9BRJ2	306 aa	Known RBP	10.98	□□□□□ -0.65
NEPRO-222	ENST00000494891	IER2	Q9BTL4	223 aa		10.98	□□□□□ -0.65
NEPRO-222	ENST00000494891	TTLL2	Q9BWV7	592 aa		10.98	□□□□□ -0.65
NEPRO-222	ENST00000494891	SLC46A2	Q9BY10	475 aa		10.98	□□□□□ -0.65
NEPRO-222	ENST00000494891	SLITRK6	Q9H5Y7	841 aa		10.98	□□□□□ -0.65
NEPRO-222	ENST00000494891	FAM124B	Q9H5Z6	455 aa	Predicted RBP	10.98	□□□□□ -0.65
NEPRO-222	ENST00000494891	BRD9	Q9H8M2	597 aa		10.98	□□□□□ -0.65
NEPRO-222	ENST00000494891	KIF9	Q9HAQ2	790 aa		10.98	□□□□□ -0.65
NEPRO-222	ENST00000494891	LTB4R2	Q9NPC1	389 aa		10.98	□□□□□ -0.65
NEPRO-222	ENST00000494891	EHD2	Q9NZN4	543 aa		10.98	□□□□□ -0.65
NEPRO-222	ENST00000494891	MAGEC2	Q9UBF1	373 aa	Predicted RBP	10.98	□□□□□ -0.65
NEPRO-222	ENST00000494891	MRPS17	Q9Y2R5	130 aa	Known RBP	10.98	□□□□□ -0.65
NEPRO-222	ENST00000494891	NME7	Q9Y5B8	376 aa		10.98	□□□□□ -0.65
NEPRO-222	ENST00000494891	NCAN	O14594	1321 aa		10.98	□□□□□ -0.65
NEPRO-222	ENST00000494891	SLC38A8	A6NNN8	435 aa		10.97	□□□□□ -0.65
NEPRO-222	ENST00000494891	ZNF263	O14978	683 aa		10.97	□□□□□ -0.65
NEPRO-222	ENST00000494891	TRIM66	O15016	1216 aa		10.97	□□□□□ -0.65
NEPRO-222	ENST00000494891	NCAM2	O15394	837 aa		10.97	□□□□□ -0.65
NEPRO-222	ENST00000494891	HCRT	O43612	131 aa		10.97	□□□□□ -0.65
NEPRO-222	ENST00000494891	PHACTR2	O75167	634 aa		10.97	□□□□□ -0.65
NEPRO-222	ENST00000494891	ATP2C2	O75185	946 aa		10.97	□□□□□ -0.65
NEPRO-222	ENST00000494891	SMC2	O95347	1197 aa		10.97	□□□□□ -0.65
NEPRO-222	ENST00000494891	P4HA1	P13674	534 aa		10.97	□□□□□ -0.65
NEPRO-222	ENST00000494891	PTPN1	P18031	435 aa	Known RBP	10.97	□□□□□ -0.65
NEPRO-222	ENST00000494891	GDI1	P31150	447 aa		10.97	□□□□□ -0.65
NEPRO-222	ENST00000494891	PSMC2	P35998	433 aa	Known RBP	10.97	□□□□□ -0.65
NEPRO-222	ENST00000494891	PPP3CC	P48454	512 aa		10.97	□□□□□ -0.65
NEPRO-222	ENST00000494891	VAMP7	P51809	220 aa		10.97	□□□□□ -0.65
NEPRO-222	ENST00000494891	DLG4	P78352	724 aa		10.97	□□□□□ -0.65
NEPRO-222	ENST00000494891	FZD5	Q13467	585 aa		10.97	□□□□□ -0.65
NEPRO-222	ENST00000494891	PNOC	Q13519	176 aa		10.97	□□□□□ -0.65
NEPRO-222	ENST00000494891	TAF12	Q16514	161 aa		10.97	□□□□□ -0.65
NEPRO-222	ENST00000494891	DDR2	Q16832	855 aa		10.97	□□□□□ -0.65
NEPRO-222	ENST00000494891	ZNF699	Q32M78	642 aa		10.97	□□□□□ -0.65
NEPRO-222	ENST00000494891	ZNF667	Q5HYK9	610 aa		10.97	□□□□□ -0.65
NEPRO-222	ENST00000494891	UNC93A	Q86WB7	457 aa		10.97	□□□□□ -0.65
NEPRO-222	ENST00000494891	CELF5	Q8N6W0	485 aa	Known RBP	10.97	□□□□□ -0.65
NEPRO-222	ENST00000494891	B3GALNT2	Q8NCR0	500 aa		10.97	□□□□□ -0.65
NEPRO-222	ENST00000494891	ST13P5	Q8NFI4	369 aa	Predicted RBP	10.97	□□□□□ -0.65
NEPRO-222	ENST00000494891	GIPC2	Q8TF65	315 aa		10.97	□□□□□ -0.65
NEPRO-222	ENST00000494891	MYLPF	Q96A32	169 aa		10.97	□□□□□ -0.65
NEPRO-222	ENST00000494891	RSPRY1	Q96DX4	576 aa		10.97	□□□□□ -0.65
NEPRO-222	ENST00000494891	ELOVL4	Q9GZR5	314 aa		10.97	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms