RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 TNIP3Q96KP6 325 aa18.83■□□□□ 0.6
HDAC4-211ENST00000494800 CEP295NLQ96MC4 621 aa18.83■□□□□ 0.6
HDAC4-211ENST00000494800 ZSWIM3Q96MP5 696 aa18.83■□□□□ 0.6
HDAC4-211ENST00000494800 TRMT61BQ9BVS5 477 aaKnown RBP18.83■□□□□ 0.6
HDAC4-211ENST00000494800 MAGED2Q9UNF1 606 aaPredicted RBP18.83■□□□□ 0.6
HDAC4-211ENST00000494800 MYO10Q9HD67 2058 aa18.83■□□□□ 0.6
HDAC4-211ENST00000494800 ATP8B3O60423 1300 aa18.82■□□□□ 0.6
HDAC4-211ENST00000494800 TRIM66O15016 1216 aa18.82■□□□□ 0.6
HDAC4-211ENST00000494800 HLA-DRAP01903 254 aa18.82■□□□□ 0.6
HDAC4-211ENST00000494800 TRIM49P0CI25 452 aa18.82■□□□□ 0.6
HDAC4-211ENST00000494800 TRIM49CP0CI26 452 aa18.82■□□□□ 0.6
HDAC4-211ENST00000494800 PSMC3P17980 439 aa18.82■□□□□ 0.6
HDAC4-211ENST00000494800 PTPN1P18031 435 aaKnown RBP18.82■□□□□ 0.6
HDAC4-211ENST00000494800 DDX6P26196 483 aaKnown RBP eCLIP18.82■□□□□ 0.6
HDAC4-211ENST00000494800 GRIK1P39086 918 aa18.82■□□□□ 0.6
HDAC4-211ENST00000494800 GCLMP48507 274 aa18.82■□□□□ 0.6
HDAC4-211ENST00000494800 DDR2Q16832 855 aa18.82■□□□□ 0.6
HDAC4-211ENST00000494800 MDH1BQ5I0G3 518 aa18.82■□□□□ 0.6
HDAC4-211ENST00000494800 KRT39Q6A163 491 aa18.82■□□□□ 0.6
HDAC4-211ENST00000494800 SCARA5Q6ZMJ2 495 aa18.82■□□□□ 0.6
HDAC4-211ENST00000494800 YAF2Q8IY57 180 aa18.82■□□□□ 0.6
HDAC4-211ENST00000494800 FAM122AQ96E09 287 aa18.82■□□□□ 0.6
HDAC4-211ENST00000494800 PCED1BQ96HM7 432 aa18.82■□□□□ 0.6
HDAC4-211ENST00000494800 TASP1Q9H6P5 420 aa18.82■□□□□ 0.6
HDAC4-211ENST00000494800 SMYD3Q9H7B4 428 aa18.82■□□□□ 0.6
HDAC4-211ENST00000494800 MMRN2Q9H8L6 949 aa18.82■□□□□ 0.6
HDAC4-211ENST00000494800 BRD9Q9H8M2 597 aa18.82■□□□□ 0.6
HDAC4-211ENST00000494800 TMEM8AQ9HCN3 771 aa18.82■□□□□ 0.6
HDAC4-211ENST00000494800 CRTAC1Q9NQ79 661 aa18.82■□□□□ 0.6
HDAC4-211ENST00000494800 MAN1B1Q9UKM7 699 aa18.82■□□□□ 0.6
HDAC4-211ENST00000494800 NOTCH4Q99466 2003 aa18.81■□□□□ 0.6
HDAC4-211ENST00000494800 ASS1P00966 412 aaKnown RBP18.81■□□□□ 0.6
HDAC4-211ENST00000494800 AOC1P19801 751 aa18.81■□□□□ 0.6
HDAC4-211ENST00000494800 BDNFP23560 247 aa18.81■□□□□ 0.6
HDAC4-211ENST00000494800 FCARP24071 287 aa18.81■□□□□ 0.6
HDAC4-211ENST00000494800 GPR15P49685 360 aa18.81■□□□□ 0.6
HDAC4-211ENST00000494800 VCPP55072 806 aaKnown RBP18.81■□□□□ 0.6
HDAC4-211ENST00000494800 PRKCQQ04759 706 aa18.81■□□□□ 0.6
HDAC4-211ENST00000494800 ISM2Q6H9L7 571 aa18.81■□□□□ 0.6
HDAC4-211ENST00000494800 PHLDB3Q6NSJ2 640 aa18.81■□□□□ 0.6
HDAC4-211ENST00000494800 B3GALNT2Q8NCR0 500 aa18.81■□□□□ 0.6
HDAC4-211ENST00000494800 MRPS31Q92665 395 aaKnown RBP18.81■□□□□ 0.6
HDAC4-211ENST00000494800 DNASE1L2Q92874 299 aa18.81■□□□□ 0.6
HDAC4-211ENST00000494800 IRF7Q92985 503 aa18.81■□□□□ 0.6
HDAC4-211ENST00000494800 EEF2KMTQ96G04 330 aa18.81■□□□□ 0.6
HDAC4-211ENST00000494800 TRMT2BQ96GJ1 504 aaKnown RBP18.81■□□□□ 0.6
HDAC4-211ENST00000494800 ELOVL4Q9GZR5 314 aa18.81■□□□□ 0.6
HDAC4-211ENST00000494800 BICDL2A1A5D9 508 aa18.8■□□□□ 0.6
HDAC4-211ENST00000494800 KRBA1A5PL33 1030 aa18.8■□□□□ 0.6
HDAC4-211ENST00000494800 SLC38A8A6NNN8 435 aa18.8■□□□□ 0.6
HDAC4-211ENST00000494800 SOBPA7XYQ1 873 aa18.8■□□□□ 0.6
HDAC4-211ENST00000494800 ZNF263O14978 683 aa18.8■□□□□ 0.6
HDAC4-211ENST00000494800 NOL4O94818 638 aa18.8■□□□□ 0.6
HDAC4-211ENST00000494800 HMGA1P17096 107 aaKnown RBP18.8■□□□□ 0.6
HDAC4-211ENST00000494800 CCNE1P24864 410 aa18.8■□□□□ 0.6
HDAC4-211ENST00000494800 AVPR1AP37288 418 aa18.8■□□□□ 0.6
HDAC4-211ENST00000494800 VIPR2P41587 438 aa18.8■□□□□ 0.6
HDAC4-211ENST00000494800 CDH8P55286 799 aa18.8■□□□□ 0.6
HDAC4-211ENST00000494800 NLRP12P59046 1061 aa18.8■□□□□ 0.6
HDAC4-211ENST00000494800 GRM2Q14416 872 aa18.8■□□□□ 0.6
HDAC4-211ENST00000494800 SLC44A4Q53GD3 710 aa18.8■□□□□ 0.6
HDAC4-211ENST00000494800 C1orf220Q5T0J3 134 aa18.8■□□□□ 0.6
HDAC4-211ENST00000494800 SDHAF4Q5VUM1 108 aa18.8■□□□□ 0.6
HDAC4-211ENST00000494800 TCERG1LQ5VWI1 586 aa18.8■□□□□ 0.6
HDAC4-211ENST00000494800 ANKRD40Q6AI12 368 aa18.8■□□□□ 0.6
HDAC4-211ENST00000494800 ARID3BQ8IVW6 561 aaPredicted RBP18.8■□□□□ 0.6
HDAC4-211ENST00000494800 MFSD6LQ8IWD5 586 aa18.8■□□□□ 0.6
HDAC4-211ENST00000494800 SPATA17Q96L03 361 aa18.8■□□□□ 0.6
HDAC4-211ENST00000494800 PLA2G2FQ9BZM2 168 aa18.8■□□□□ 0.6
HDAC4-211ENST00000494800 IRF2BPLQ9H1B7 796 aa18.8■□□□□ 0.6
HDAC4-211ENST00000494800 TBC1D17Q9HA65 648 aa18.8■□□□□ 0.6
HDAC4-211ENST00000494800 IL21Q9HBE4 155 aa18.8■□□□□ 0.6
HDAC4-211ENST00000494800 DOCK6Q96HP0 2047 aa18.79■□□□□ 0.6
HDAC4-211ENST00000494800 HEPACAM2A8MVW5 462 aa18.79■□□□□ 0.6
HDAC4-211ENST00000494800 NRG2O14511 850 aaPredicted RBP18.79■□□□□ 0.6
HDAC4-211ENST00000494800 NPR3P17342 541 aa18.79■□□□□ 0.6
HDAC4-211ENST00000494800 WEE1P30291 646 aa18.79■□□□□ 0.6
HDAC4-211ENST00000494800 GDI1P31150 447 aa18.79■□□□□ 0.6
HDAC4-211ENST00000494800 RAP1GAPP47736 663 aa18.79■□□□□ 0.6
HDAC4-211ENST00000494800 MXI1P50539 228 aa18.79■□□□□ 0.6
HDAC4-211ENST00000494800 PTPN5P54829 565 aa18.79■□□□□ 0.6
HDAC4-211ENST00000494800 NOP14P78316 857 aaKnown RBP18.79■□□□□ 0.6
HDAC4-211ENST00000494800 CYP4F8P98187 520 aa18.79■□□□□ 0.6
HDAC4-211ENST00000494800 PPP3CAQ08209 521 aa18.79■□□□□ 0.6
HDAC4-211ENST00000494800 MLF2Q15773 248 aaPredicted RBP18.79■□□□□ 0.6
HDAC4-211ENST00000494800 CCDC142Q17RM4 750 aa18.79■□□□□ 0.6
HDAC4-211ENST00000494800 DCAF17Q5H9S7 520 aaPredicted RBP18.79■□□□□ 0.6
HDAC4-211ENST00000494800 STXBP5Q5T5C0 1151 aa18.79■□□□□ 0.6
HDAC4-211ENST00000494800 CWF19L1Q69YN2 538 aaKnown RBP18.79■□□□□ 0.6
HDAC4-211ENST00000494800 POTEHQ6S545 545 aa18.79■□□□□ 0.6
HDAC4-211ENST00000494800 VITQ6UXI7 678 aa18.79■□□□□ 0.6
HDAC4-211ENST00000494800 UNC93AQ86WB7 457 aa18.79■□□□□ 0.6
HDAC4-211ENST00000494800 TAS1R2Q8TE23 839 aa18.79■□□□□ 0.6
HDAC4-211ENST00000494800 MYRFLQ96LU7 910 aa18.79■□□□□ 0.6
HDAC4-211ENST00000494800 MED10Q9BTT4 135 aa18.79■□□□□ 0.6
HDAC4-211ENST00000494800 DPEP3Q9H4B8 488 aa18.79■□□□□ 0.6
HDAC4-211ENST00000494800 METTL14Q9HCE5 456 aaKnown RBP18.79■□□□□ 0.6
HDAC4-211ENST00000494800 OBP2AQ9NY56 170 aa18.79■□□□□ 0.6
HDAC4-211ENST00000494800 ARMCX3Q9UH62 379 aaPredicted RBP18.79■□□□□ 0.6
HDAC4-211ENST00000494800 STARD6P59095 220 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms