RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 ELMO3Q96BJ8 720 aa10.29□□□□□ -0.76
MSH5-218ENST00000494646 SPATA32Q96LK8 384 aa10.29□□□□□ -0.76
MSH5-218ENST00000494646 GCNAQ96QF7 691 aa10.29□□□□□ -0.76
MSH5-218ENST00000494646 GTSE1Q9NYZ3 720 aa10.29□□□□□ -0.76
MSH5-218ENST00000494646 COL4A2P08572 1712 aa10.28□□□□□ -0.76
MSH5-218ENST00000494646 ARNTLO00327 626 aa10.28□□□□□ -0.76
MSH5-218ENST00000494646 GABRDO14764 452 aa10.28□□□□□ -0.76
MSH5-218ENST00000494646 ACTN4O43707 911 aaKnown RBP10.28□□□□□ -0.76
MSH5-218ENST00000494646 EXOC3O60645 756 aa10.28□□□□□ -0.76
MSH5-218ENST00000494646 LMNAP02545 664 aaKnown RBP10.28□□□□□ -0.76
MSH5-218ENST00000494646 CSH1P0DML2 217 aa10.28□□□□□ -0.76
MSH5-218ENST00000494646 CSH2P0DML3 217 aa10.28□□□□□ -0.76
MSH5-218ENST00000494646 PFKFB1P16118 471 aa10.28□□□□□ -0.76
MSH5-218ENST00000494646 GNL1P36915 607 aaPredicted RBP10.28□□□□□ -0.76
MSH5-218ENST00000494646 NLRP12P59046 1061 aa10.28□□□□□ -0.76
MSH5-218ENST00000494646 TNK2Q07912 1038 aa10.28□□□□□ -0.76
MSH5-218ENST00000494646 CYP24A1Q07973 514 aa10.28□□□□□ -0.76
MSH5-218ENST00000494646 FCHO2Q0JRZ9 810 aa10.28□□□□□ -0.76
MSH5-218ENST00000494646 MTAPQ13126 283 aa10.28□□□□□ -0.76
MSH5-218ENST00000494646 TRPC3Q13507 836 aa10.28□□□□□ -0.76
MSH5-218ENST00000494646 PSMD6Q15008 389 aa10.28□□□□□ -0.76
MSH5-218ENST00000494646 KNOP1Q1ED39 458 aaKnown RBP10.28□□□□□ -0.76
MSH5-218ENST00000494646 KMT5BQ4FZB7 885 aa10.28□□□□□ -0.76
MSH5-218ENST00000494646 DPH6Q7L8W6 267 aa10.28□□□□□ -0.76
MSH5-218ENST00000494646 TMEM150AQ86TG1 271 aa10.28□□□□□ -0.76
MSH5-218ENST00000494646 OR6B3Q8NGW1 331 aa10.28□□□□□ -0.76
MSH5-218ENST00000494646 BPIFB1Q8TDL5 484 aa10.28□□□□□ -0.76
MSH5-218ENST00000494646 KBTBD7Q8WVZ9 684 aa10.28□□□□□ -0.76
MSH5-218ENST00000494646 CYP2S1Q96SQ9 504 aa10.28□□□□□ -0.76
MSH5-218ENST00000494646 PKMYT1Q99640 499 aa10.28□□□□□ -0.76
MSH5-218ENST00000494646 CGRRF1Q99675 332 aa10.28□□□□□ -0.76
MSH5-218ENST00000494646 SYT15Q9BQS2 421 aa10.28□□□□□ -0.76
MSH5-218ENST00000494646 MRPL45Q9BRJ2 306 aaKnown RBP10.28□□□□□ -0.76
MSH5-218ENST00000494646 TRPV5Q9NQA5 729 aa10.28□□□□□ -0.76
MSH5-218ENST00000494646 GKN1Q9NS71 199 aa10.28□□□□□ -0.76
MSH5-218ENST00000494646 MAGEC2Q9UBF1 373 aaPredicted RBP10.28□□□□□ -0.76
MSH5-218ENST00000494646 CCL26Q9Y258 94 aa10.28□□□□□ -0.76
MSH5-218ENST00000494646 NME7Q9Y5B8 376 aa10.28□□□□□ -0.76
MSH5-218ENST00000494646 EP300Q09472 2414 aaPredicted RBP10.28□□□□□ -0.76
MSH5-218ENST00000494646 PTPRDP23468 1912 aa10.27□□□□□ -0.76
MSH5-218ENST00000494646 PHACTR2O75167 634 aa10.27□□□□□ -0.77
MSH5-218ENST00000494646 CLSTN1O94985 981 aa10.27□□□□□ -0.77
MSH5-218ENST00000494646 CHRM1P11229 460 aaPredicted RBP10.27□□□□□ -0.77
MSH5-218ENST00000494646 CHRNB1P11230 501 aa10.27□□□□□ -0.77
MSH5-218ENST00000494646 BDNFP23560 247 aa10.27□□□□□ -0.77
MSH5-218ENST00000494646 CMA1P23946 247 aa10.27□□□□□ -0.77
MSH5-218ENST00000494646 PCSK1P29120 753 aa10.27□□□□□ -0.77
MSH5-218ENST00000494646 AVPR1AP37288 418 aa10.27□□□□□ -0.77
MSH5-218ENST00000494646 GRIK1P39086 918 aa10.27□□□□□ -0.77
MSH5-218ENST00000494646 MYL6P60660 151 aa10.27□□□□□ -0.77
MSH5-218ENST00000494646 SNRPFP62306 86 aaKnown RBP10.27□□□□□ -0.77
MSH5-218ENST00000494646 RPL10AP62906 217 aaKnown RBP10.27□□□□□ -0.77
MSH5-218ENST00000494646 KRT85P78386 507 aa10.27□□□□□ -0.77
MSH5-218ENST00000494646 CYP27A1Q02318 531 aa10.27□□□□□ -0.77
MSH5-218ENST00000494646 BMT2Q1RMZ1 405 aa10.27□□□□□ -0.77
MSH5-218ENST00000494646 WDR72Q3MJ13 1102 aa10.27□□□□□ -0.77
MSH5-218ENST00000494646 ARHGAP29Q52LW3 1261 aa10.27□□□□□ -0.77
MSH5-218ENST00000494646 TRIM68Q6AZZ1 485 aa10.27□□□□□ -0.77
MSH5-218ENST00000494646 FAM171BQ6P995 826 aa10.27□□□□□ -0.77
MSH5-218ENST00000494646 TXNDC11Q6PKC3 985 aa10.27□□□□□ -0.77
MSH5-218ENST00000494646 CMTM8Q8IZV2 173 aa10.27□□□□□ -0.77
MSH5-218ENST00000494646 ZNF687Q8N1G0 1237 aa10.27□□□□□ -0.77
MSH5-218ENST00000494646 DCLK2Q8N568 766 aa10.27□□□□□ -0.77
MSH5-218ENST00000494646 CELF5Q8N6W0 485 aaKnown RBP10.27□□□□□ -0.77
MSH5-218ENST00000494646 KIAA0895Q8NCT3 520 aa10.27□□□□□ -0.77
MSH5-218ENST00000494646 PLEKHO2Q8TD55 490 aa10.27□□□□□ -0.77
MSH5-218ENST00000494646 MRPS31Q92665 395 aaKnown RBP10.27□□□□□ -0.77
MSH5-218ENST00000494646 MYLPFQ96A32 169 aa10.27□□□□□ -0.77
MSH5-218ENST00000494646 ZMYND15Q9H091 742 aa10.27□□□□□ -0.77
MSH5-218ENST00000494646 GZF1Q9H116 711 aaPredicted RBP10.27□□□□□ -0.77
MSH5-218ENST00000494646 SNX25Q9H3E2 840 aa10.27□□□□□ -0.77
MSH5-218ENST00000494646 TRPC7Q9HCX4 862 aa10.27□□□□□ -0.77
MSH5-218ENST00000494646 CRTAC1Q9NQ79 661 aa10.27□□□□□ -0.77
MSH5-218ENST00000494646 RBM12Q9NTZ6 932 aaKnown RBP10.27□□□□□ -0.77
MSH5-218ENST00000494646 EXOC1Q9NV70 894 aa10.27□□□□□ -0.77
MSH5-218ENST00000494646 NXF1Q9UBU9 619 aaKnown RBP10.27□□□□□ -0.77
MSH5-218ENST00000494646 FBXO4Q9UKT5 387 aa10.27□□□□□ -0.77
MSH5-218ENST00000494646 CDH9Q9ULB4 789 aa10.27□□□□□ -0.77
MSH5-218ENST00000494646 MYOFQ9NZM1 2061 aa10.27□□□□□ -0.77
MSH5-218ENST00000494646 UBE4BO95155 1302 aa10.27□□□□□ -0.77
MSH5-218ENST00000494646 DNAH14Q0VDD8 3507 aa10.27□□□□□ -0.77
MSH5-218ENST00000494646 SPECC1L-ADORA2AF8WAN1 911 aa10.26□□□□□ -0.77
MSH5-218ENST00000494646 NOL4O94818 638 aa10.26□□□□□ -0.77
MSH5-218ENST00000494646 PRR29P0C7W0 189 aa10.26□□□□□ -0.77
MSH5-218ENST00000494646 WARSP23381 471 aaKnown RBP10.26□□□□□ -0.77
MSH5-218ENST00000494646 MAGEA9P43362 315 aa10.26□□□□□ -0.77
MSH5-218ENST00000494646 SYKP43405 635 aa10.26□□□□□ -0.77
MSH5-218ENST00000494646 RPS9P46781 194 aaKnown RBP10.26□□□□□ -0.77
MSH5-218ENST00000494646 NDUFA8P51970 172 aa10.26□□□□□ -0.77
MSH5-218ENST00000494646 CDH8P55286 799 aa10.26□□□□□ -0.77
MSH5-218ENST00000494646 TNNC1P63316 161 aa10.26□□□□□ -0.77
MSH5-218ENST00000494646 PSMD2Q13200 908 aa10.26□□□□□ -0.77
MSH5-218ENST00000494646 GAS6Q14393 721 aa10.26□□□□□ -0.77
MSH5-218ENST00000494646 PON2Q15165 354 aa10.26□□□□□ -0.77
MSH5-218ENST00000494646 MDH1BQ5I0G3 518 aa10.26□□□□□ -0.77
MSH5-218ENST00000494646 ZC3H14Q6PJT7 736 aaKnown RBP10.26□□□□□ -0.77
MSH5-218ENST00000494646 C4orf50Q6ZRC1 276 aa10.26□□□□□ -0.77
MSH5-218ENST00000494646 LIMS2Q7Z4I7 341 aa10.26□□□□□ -0.77
MSH5-218ENST00000494646 MON1AQ86VX9 555 aa10.26□□□□□ -0.77
MSH5-218ENST00000494646 ATRIPQ8WXE1 791 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms