RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 SPATA2LQ8IUW3 424 aaPredicted RBP14.1□□□□□ -0.15
ERCC3-209ENST00000494464 PJA1Q8NG27 643 aa14.1□□□□□ -0.15
ERCC3-209ENST00000494464 TMC2Q8TDI7 906 aa14.1□□□□□ -0.15
ERCC3-209ENST00000494464 GCNAQ96QF7 691 aa14.1□□□□□ -0.15
ERCC3-209ENST00000494464 MMS19Q96T76 1030 aa14.1□□□□□ -0.15
ERCC3-209ENST00000494464 PI4K2AQ9BTU6 479 aa14.1□□□□□ -0.15
ERCC3-209ENST00000494464 ATXN3LQ9H3M9 355 aa14.1□□□□□ -0.15
ERCC3-209ENST00000494464 TRPV5Q9NQA5 729 aa14.1□□□□□ -0.15
ERCC3-209ENST00000494464 GTF3C4Q9UKN8 822 aa14.1□□□□□ -0.15
ERCC3-209ENST00000494464 GREB1Q4ZG55 1949 aa14.1□□□□□ -0.15
ERCC3-209ENST00000494464 NCANO14594 1321 aa14.1□□□□□ -0.15
ERCC3-209ENST00000494464 PATJQ8NI35 1801 aa14.1□□□□□ -0.15
ERCC3-209ENST00000494464 MYBPHLA2RUH7 354 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 HCRTO43612 131 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 CSH1P0DML2 217 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 CSH2P0DML3 217 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 HMGA1P17096 107 aaKnown RBP14.09□□□□□ -0.15
ERCC3-209ENST00000494464 MAGEA11P43364 429 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 NLRP12P59046 1061 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 ENPEPQ07075 957 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 BIRC3Q13489 604 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 IQCB1Q15051 598 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 TAF12Q16514 161 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 CCDC142Q17RM4 750 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 WDR72Q3MJ13 1102 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 ZCWPW2Q504Y3 356 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 SLC44A4Q53GD3 710 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 STXBP5Q5T5C0 1151 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 C4orf50Q6ZRC1 276 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 C11orf57Q6ZUT1 292 aaPredicted RBP14.09□□□□□ -0.15
ERCC3-209ENST00000494464 MFSD6LQ8IWD5 586 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 GIPC2Q8TF65 315 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 IRF7Q92985 503 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 TRIM44Q96DX7 344 aaPredicted RBP14.09□□□□□ -0.15
ERCC3-209ENST00000494464 TRMT2BQ96GJ1 504 aaKnown RBP14.09□□□□□ -0.15
ERCC3-209ENST00000494464 TRMT61BQ9BVS5 477 aaKnown RBP14.09□□□□□ -0.15
ERCC3-209ENST00000494464 BRD9Q9H8M2 597 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 CRTAC1Q9NQ79 661 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 OBP2AQ9NY56 170 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 FRMD4BQ9Y2L6 1034 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 KANSL1LA0AUZ9 987 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 HEPACAM2A8MVW5 462 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 IKBKBO14920 756 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 PHACTR2O75167 634 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 NOL4O94818 638 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 C4BPAP04003 597 aaKnown RBP14.09□□□□□ -0.15
ERCC3-209ENST00000494464 NR2F2P24468 414 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 CYP2F1P24903 491 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 LMO2P25791 158 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 DDX6P26196 483 aaKnown RBP eCLIP14.09□□□□□ -0.15
ERCC3-209ENST00000494464 VIPR2P41587 438 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 CDR1P51861 262 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 MYL6P60660 151 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 PSMC1P62191 440 aaKnown RBP14.09□□□□□ -0.15
ERCC3-209ENST00000494464 FCHO2Q0JRZ9 810 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 NCOA4Q13772 614 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 GRM2Q14416 872 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 ZNF699Q32M78 642 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 ZACNQ401N2 412 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 GPR158Q5T848 1215 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 CEP135Q66GS9 1140 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 VSTM1Q6UX27 236 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 LUZP1Q86V48 1076 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 DTWD2Q8NBA8 298 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 MYCBPAPQ8TBZ2 947 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 MYLPFQ96A32 169 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 MYRFLQ96LU7 910 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 CEP295NLQ96MC4 621 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 MRPL45Q9BRJ2 306 aaKnown RBP14.09□□□□□ -0.15
ERCC3-209ENST00000494464 OSBPL6Q9BZF3 934 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 TASP1Q9H6P5 420 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 RMND1Q9NWS8 449 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 DLGAP2Q9P1A6 1054 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 UXTQ9UBK9 157 aaPredicted RBP14.09□□□□□ -0.15
ERCC3-209ENST00000494464 SIT1Q9Y3P8 196 aa14.09□□□□□ -0.15
ERCC3-209ENST00000494464 SOBPA7XYQ1 873 aa14.08□□□□□ -0.16
ERCC3-209ENST00000494464 ARNTLO00327 626 aa14.08□□□□□ -0.16
ERCC3-209ENST00000494464 STK25O00506 426 aa14.08□□□□□ -0.16
ERCC3-209ENST00000494464 ATP2C2O75185 946 aa14.08□□□□□ -0.16
ERCC3-209ENST00000494464 F11P03951 625 aa14.08□□□□□ -0.16
ERCC3-209ENST00000494464 RPL13P26373 211 aaKnown RBP14.08□□□□□ -0.16
ERCC3-209ENST00000494464 GDI1P31150 447 aa14.08□□□□□ -0.16
ERCC3-209ENST00000494464 GPR15P49685 360 aa14.08□□□□□ -0.16
ERCC3-209ENST00000494464 DLG4P78352 724 aa14.08□□□□□ -0.16
ERCC3-209ENST00000494464 CYP4F8P98187 520 aa14.08□□□□□ -0.16
ERCC3-209ENST00000494464 PNOCQ13519 176 aa14.08□□□□□ -0.16
ERCC3-209ENST00000494464 EDRF1Q3B7T1 1238 aa14.08□□□□□ -0.16
ERCC3-209ENST00000494464 COBLL1Q53SF7 1204 aa14.08□□□□□ -0.16
ERCC3-209ENST00000494464 INTS8Q75QN2 995 aaKnown RBP14.08□□□□□ -0.16
ERCC3-209ENST00000494464 TMEM150AQ86TG1 271 aa14.08□□□□□ -0.16
ERCC3-209ENST00000494464 ARID3BQ8IVW6 561 aaPredicted RBP14.08□□□□□ -0.16
ERCC3-209ENST00000494464 TRIML1Q8N9V2 468 aa14.08□□□□□ -0.16
ERCC3-209ENST00000494464 RSPRY1Q96DX4 576 aa14.08□□□□□ -0.16
ERCC3-209ENST00000494464 GSDMAQ96QA5 445 aa14.08□□□□□ -0.16
ERCC3-209ENST00000494464 FOXQ1Q9C009 403 aa14.08□□□□□ -0.16
ERCC3-209ENST00000494464 SNX25Q9H3E2 840 aa14.08□□□□□ -0.16
ERCC3-209ENST00000494464 LTB4R2Q9NPC1 389 aa14.08□□□□□ -0.16
ERCC3-209ENST00000494464 MAPK8IP1Q9UQF2 711 aa14.08□□□□□ -0.16
ERCC3-209ENST00000494464 NME7Q9Y5B8 376 aa14.08□□□□□ -0.16
ERCC3-209ENST00000494464 CACNA1HO95180 2353 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms