RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 MLST8Q9BVC4 326 aa2.9□□□□□ -1.95
LMNB1-207ENST00000494185 SARGQ9BW04 601 aa2.9□□□□□ -1.95
LMNB1-207ENST00000494185 TRIM54Q9BYV2 358 aa2.9□□□□□ -1.95
LMNB1-207ENST00000494185 UBA5Q9GZZ9 404 aa2.9□□□□□ -1.95
LMNB1-207ENST00000494185 BHMT2Q9H2M3 363 aa2.9□□□□□ -1.95
LMNB1-207ENST00000494185 UNKLQ9H9P5 680 aaKnown RBP2.9□□□□□ -1.95
LMNB1-207ENST00000494185 SERHLQ9NQF3 203 aa2.9□□□□□ -1.95
LMNB1-207ENST00000494185 CHST12Q9NRB3 414 aa2.9□□□□□ -1.95
LMNB1-207ENST00000494185 EHD3Q9NZN3 535 aa2.9□□□□□ -1.95
LMNB1-207ENST00000494185 CAMSAP3Q9P1Y5 1249 aaPredicted RBP2.9□□□□□ -1.95
LMNB1-207ENST00000494185 TLK1Q9UKI8 766 aa2.9□□□□□ -1.95
LMNB1-207ENST00000494185 AGAP1Q9UPQ3 857 aa2.9□□□□□ -1.95
LMNB1-207ENST00000494185 SH2B3Q9UQQ2 575 aa2.9□□□□□ -1.95
LMNB1-207ENST00000494185 FAM50BQ9Y247 325 aa2.9□□□□□ -1.95
LMNB1-207ENST00000494185 PCDHGB6Q9Y5F9 930 aa2.9□□□□□ -1.95
LMNB1-207ENST00000494185 MYO1FO00160 1098 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 BTN3A1O00481 513 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 TBX3O15119 743 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 VPS4BO75351 444 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 DNAJB5O75953 348 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 NUDT3O95989 172 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 NBPF7P0C2Y1 421 aaPredicted RBP2.89□□□□□ -1.95
LMNB1-207ENST00000494185 MYF5P13349 255 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 IDEP14735 1019 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 GPD1P21695 349 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 ZFP36P26651 326 aaKnown RBP2.89□□□□□ -1.95
LMNB1-207ENST00000494185 KLRC1P26715 233 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 CD38P28907 300 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 PRKAR1BP31321 381 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 GCLCP48506 637 aaPredicted RBP2.89□□□□□ -1.95
LMNB1-207ENST00000494185 ARFIP2P53365 341 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 SEC24CP53992 1094 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 PRKAG1P54619 331 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 TCF15Q12870 199 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 KLF10Q13118 480 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 SLC13A2Q13183 592 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 BMPR2Q13873 1038 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 DHX8Q14562 1220 aaKnown RBP2.89□□□□□ -1.95
LMNB1-207ENST00000494185 PTPRRQ15256 657 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 SUMO4Q6EEV6 95 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 MTHFD1LQ6UB35 978 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 SLC30A10Q6XR72 485 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 PPP1R32Q7Z5V6 425 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 LDLRAD3Q86YD5 345 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 FAM9AQ8IZU1 332 aaPredicted RBP2.89□□□□□ -1.95
LMNB1-207ENST00000494185 SPARTQ8N0X7 666 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 Q8N1X5 172 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 MPP5Q8N3R9 675 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 SDR16C5Q8N3Y7 309 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 PJA1Q8NG27 643 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 POC1BQ8TC44 478 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 ASB10Q8WXI3 467 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 LINC00476Q8WZB0 136 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 FKBP10Q96AY3 582 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 APIPQ96GX9 242 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 CRAMP1Q96RY5 1269 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 ADAM2Q99965 735 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 ACTRT3Q9BYD9 372 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 KRTAP9-3Q9BYQ3 159 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 ZNF518BQ9C0D4 1074 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 NUP62CLQ9H1M0 184 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 ZNF287Q9HBT7 754 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 PNPLA8Q9NP80 782 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 A1CFQ9NQ94 594 aaKnown RBP2.89□□□□□ -1.95
LMNB1-207ENST00000494185 KLC4Q9NSK0 619 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 ETAA1Q9NY74 926 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 CTTNBP2NLQ9P2B4 639 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 HESX1Q9UBX0 185 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 AFF4Q9UHB7 1163 aaKnown RBP2.89□□□□□ -1.95
LMNB1-207ENST00000494185 DMRT1Q9Y5R6 373 aa2.89□□□□□ -1.95
LMNB1-207ENST00000494185 MBD3L4A6NDZ8 208 aaPredicted RBP2.88□□□□□ -1.95
LMNB1-207ENST00000494185 MBD3L3A6NE82 208 aaPredicted RBP2.88□□□□□ -1.95
LMNB1-207ENST00000494185 AQP7P3A6NL99 342 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 SLC16A3O15427 465 aaKnown RBP2.88□□□□□ -1.95
LMNB1-207ENST00000494185 CCP110O43303 1012 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 LPXNO60711 386 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 PQBP1O60828 265 aaKnown RBP2.88□□□□□ -1.95
LMNB1-207ENST00000494185 SUN1O94901 812 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 ZFPL1O95159 310 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 LMNAP02545 664 aaKnown RBP2.88□□□□□ -1.95
LMNB1-207ENST00000494185 PRKCBP05771 671 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 ZKSCAN1P17029 563 aaPredicted RBP2.88□□□□□ -1.95
LMNB1-207ENST00000494185 CHRM3P20309 590 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 GRIA3P42263 894 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 HTR3AP46098 478 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 SLC11A2P49281 568 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 SUMO3P55854 103 aaPredicted RBP2.88□□□□□ -1.95
LMNB1-207ENST00000494185 UCP3P55916 312 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 TPTEP56180 551 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 SUMO2P61956 95 aaKnown RBP2.88□□□□□ -1.95
LMNB1-207ENST00000494185 MC2RQ01718 297 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 PICALMQ13492 652 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 SF3B3Q15393 1217 aaKnown RBP2.88□□□□□ -1.95
LMNB1-207ENST00000494185 CNGA2Q16280 664 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 TBC1D25Q3MII6 688 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 CD300EQ496F6 205 aaPredicted RBP2.88□□□□□ -1.95
LMNB1-207ENST00000494185 RBM20Q5T481 1227 aaKnown RBP2.88□□□□□ -1.95
LMNB1-207ENST00000494185 KIAA1614Q5VZ46 1190 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 TAF2Q6P1X5 1199 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 PTF1AQ7RTS3 328 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms