RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 NTRK3Q16288 839 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 MAPK6Q16659 721 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 NT5DC1Q5TFE4 455 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 AMIGO2Q86SJ2 522 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 SPARTQ8N0X7 666 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 SRBD1Q8N5C6 995 aaKnown RBP7.17□□□□□ -1.26
VPS13B-205ENST00000493587 LZTR1Q8N653 840 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 SPOCK2Q92563 424 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 MRRFQ96E11 262 aaKnown RBP7.17□□□□□ -1.26
VPS13B-205ENST00000493587 SNF8Q96H20 258 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 CIB1Q99828 191 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 FANCEQ9HB96 536 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 DDX28Q9NUL7 540 aaKnown RBP7.17□□□□□ -1.26
VPS13B-205ENST00000493587 ARL8BQ9NVJ2 186 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 ARHGAP20Q9P2F6 1191 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 KLF15Q9UIH9 416 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 SLC8A2Q9UPR5 921 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 DTNAQ9Y4J8 743 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 hCG_1642624A0A1W2PR95 340 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 E7EWF7 191 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 ZW10O43264 779 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 UGT1A9O60656 530 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 ZC3H11AO75152 810 aaKnown RBP eCLIP7.17□□□□□ -1.26
VPS13B-205ENST00000493587 NUDT17P0C025 328 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 CDH2P19022 906 aaPredicted RBP7.17□□□□□ -1.26
VPS13B-205ENST00000493587 UGT1A6P19224 532 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 UGT1A1P22309 533 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 UGT1A4P22310 534 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 PEX2P28328 305 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 RXRBP28702 533 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 UGT1A3P35503 534 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 UGT1A5P35504 534 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 ADD2P35612 726 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 ARHGAP4P98171 946 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 CDONQ4KMG0 1287 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 HGSNATQ68CP4 663 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 METTL25Q8N6Q8 603 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 PSD4Q8NDX1 1056 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 SGCDQ92629 289 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 SLITRK6Q9H5Y7 841 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 SP140LQ9H930 580 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 UGT1A7Q9HAW7 530 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 UGT1A10Q9HAW8 530 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 UGT1A8Q9HAW9 530 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 LRRC4BQ9NT99 713 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.17□□□□□ -1.26
VPS13B-205ENST00000493587 HEY2Q9UBP5 337 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 ZNF229Q9UJW7 825 aa7.17□□□□□ -1.26
VPS13B-205ENST00000493587 KRBA1A5PL33 1030 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 PABPN1LA6NDY0 278 aaKnown RBP7.16□□□□□ -1.26
VPS13B-205ENST00000493587 IRS4O14654 1257 aaPredicted RBP7.16□□□□□ -1.26
VPS13B-205ENST00000493587 ITM2AO43736 263 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 ARHGEF15O94989 841 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 KRT6AP02538 564 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 KRT6BP04259 564 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 KLRC1P26715 233 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 HADHAP40939 763 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 CENPAP49450 140 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 METAP2P50579 478 aaKnown RBP eCLIP7.16□□□□□ -1.26
VPS13B-205ENST00000493587 GNG2P59768 71 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 KDSRQ06136 332 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 OVGP1Q12889 678 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 TRMT5Q32P41 509 aaKnown RBP7.16□□□□□ -1.26
VPS13B-205ENST00000493587 TBC1D10BQ4KMP7 808 aaPredicted RBP7.16□□□□□ -1.26
VPS13B-205ENST00000493587 ELMSAN1Q6PJG2 1045 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 EPM2AIP1Q7L775 607 aaPredicted RBP7.16□□□□□ -1.26
VPS13B-205ENST00000493587 DHDDSQ86SQ9 333 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 ZNF410Q86VK4 478 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 SPATA5Q8NB90 893 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 NGLY1Q96IV0 654 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 ZFYVE19Q96K21 471 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 CLPTM1LQ96KA5 538 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 PHF20Q9BVI0 1012 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 SLC26A6Q9BXS9 759 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 ZNF717Q9BY31 904 aaPredicted RBP7.16□□□□□ -1.26
VPS13B-205ENST00000493587 IMPG2Q9BZV3 1241 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 EPB41L4AQ9HCS5 686 aaPredicted RBP7.16□□□□□ -1.26
VPS13B-205ENST00000493587 FARSBQ9NSD9 589 aaKnown RBP7.16□□□□□ -1.26
VPS13B-205ENST00000493587 SLC38A7Q9NVC3 462 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 AGO2Q9UKV8 859 aaKnown RBP7.16□□□□□ -1.26
VPS13B-205ENST00000493587 ROBO3Q96MS0 1386 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 BICDL2A1A5D9 508 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 CAPN8A6NHC0 703 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 BTBD18B2RXH4 712 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 MFN2O95140 757 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 BMP10O95393 424 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 FGGP02679 453 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 ENO1P06733 434 aaKnown RBP7.16□□□□□ -1.26
VPS13B-205ENST00000493587 PTPN2P17706 415 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 TAC1P20366 129 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 PTPREP23469 700 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 EEF1GP26641 437 aaKnown RBP7.16□□□□□ -1.26
VPS13B-205ENST00000493587 BTDP43251 543 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 NR4A2P43354 598 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 TMED2Q15363 201 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 ZNF829Q3KNS6 432 aaPredicted RBP7.16□□□□□ -1.26
VPS13B-205ENST00000493587 HABP4Q5JVS0 413 aaKnown RBP7.16□□□□□ -1.26
VPS13B-205ENST00000493587 SNAP47Q5SQN1 464 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 CLNKQ7Z7G1 428 aa7.16□□□□□ -1.26
VPS13B-205ENST00000493587 USP37Q86T82 979 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms