RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 LAMA3Q16787 3333 aa16.74■□□□□ 0.27
HPS4-216ENST00000493455 ATP8B3O60423 1300 aa16.73■□□□□ 0.27
HPS4-216ENST00000493455 PRRC2BQ5JSZ5 2229 aaKnown RBP16.73■□□□□ 0.27
HPS4-216ENST00000493455 PRRG1O14668 218 aa16.73■□□□□ 0.27
HPS4-216ENST00000493455 SOAT2O75908 522 aa16.73■□□□□ 0.27
HPS4-216ENST00000493455 PAEPP09466 180 aa16.73■□□□□ 0.27
HPS4-216ENST00000493455 VDRP11473 427 aa16.73■□□□□ 0.27
HPS4-216ENST00000493455 BDNFP23560 247 aa16.73■□□□□ 0.27
HPS4-216ENST00000493455 PDE6CP51160 858 aa16.73■□□□□ 0.27
HPS4-216ENST00000493455 ZNF132P52740 706 aa16.73■□□□□ 0.27
HPS4-216ENST00000493455 ZBED6P86452 979 aa16.73■□□□□ 0.27
HPS4-216ENST00000493455 RAB33AQ14088 237 aa16.73■□□□□ 0.27
HPS4-216ENST00000493455 MAPRE1Q15691 268 aaKnown RBP16.73■□□□□ 0.27
HPS4-216ENST00000493455 CCDC85BQ15834 202 aaPredicted RBP16.73■□□□□ 0.27
HPS4-216ENST00000493455 NFE2Q16621 373 aaPredicted RBP16.73■□□□□ 0.27
HPS4-216ENST00000493455 FAM171BQ6P995 826 aa16.73■□□□□ 0.27
HPS4-216ENST00000493455 FAM35AQ86V20 835 aa16.73■□□□□ 0.27
HPS4-216ENST00000493455 GPR65Q8IYL9 337 aa16.73■□□□□ 0.27
HPS4-216ENST00000493455 CRYBG2Q8N1P7 616 aa16.73■□□□□ 0.27
HPS4-216ENST00000493455 ZNF461Q8TAF7 563 aa16.73■□□□□ 0.27
HPS4-216ENST00000493455 TFAP2BQ92481 460 aa16.73■□□□□ 0.27
HPS4-216ENST00000493455 IQCDQ96DY2 449 aa16.73■□□□□ 0.27
HPS4-216ENST00000493455 PKMYT1Q99640 499 aa16.73■□□□□ 0.27
HPS4-216ENST00000493455 ZNF518BQ9C0D4 1074 aa16.73■□□□□ 0.27
HPS4-216ENST00000493455 FAM124BQ9H5Z6 455 aaPredicted RBP16.73■□□□□ 0.27
HPS4-216ENST00000493455 KRT82Q9NSB4 513 aa16.73■□□□□ 0.27
HPS4-216ENST00000493455 SEPT11Q9NVA2 429 aaKnown RBP16.73■□□□□ 0.27
HPS4-216ENST00000493455 A0A1W2PQJ5 194 aa16.72■□□□□ 0.27
HPS4-216ENST00000493455 GOLGA6L6A8MZA4 724 aa16.72■□□□□ 0.27
HPS4-216ENST00000493455 M0QYV0 167 aa16.72■□□□□ 0.27
HPS4-216ENST00000493455 SEC24AO95486 1093 aa16.72■□□□□ 0.27
HPS4-216ENST00000493455 FOSL2P15408 326 aa16.72■□□□□ 0.27
HPS4-216ENST00000493455 FERP16591 822 aa16.72■□□□□ 0.27
HPS4-216ENST00000493455 CYP2F1P24903 491 aa16.72■□□□□ 0.27
HPS4-216ENST00000493455 CDC25BP30305 580 aa16.72■□□□□ 0.27
HPS4-216ENST00000493455 CLCN4P51793 760 aa16.72■□□□□ 0.27
HPS4-216ENST00000493455 DUSP4Q13115 394 aa16.72■□□□□ 0.27
HPS4-216ENST00000493455 DUSP6Q16828 381 aa16.72■□□□□ 0.27
HPS4-216ENST00000493455 TDRD12Q587J7 1177 aaKnown RBP16.72■□□□□ 0.27
HPS4-216ENST00000493455 LIN9Q5TKA1 542 aa16.72■□□□□ 0.27
HPS4-216ENST00000493455 SDHAF4Q5VUM1 108 aa16.72■□□□□ 0.27
HPS4-216ENST00000493455 KREMEN2Q8NCW0 462 aa16.72■□□□□ 0.27
HPS4-216ENST00000493455 UBA3Q8TBC4 463 aa16.72■□□□□ 0.27
HPS4-216ENST00000493455 SLC20A1Q8WUM9 679 aa16.72■□□□□ 0.27
HPS4-216ENST00000493455 GUCD1Q96NT3 240 aa16.72■□□□□ 0.27
HPS4-216ENST00000493455 EDEM3Q9BZQ6 932 aa16.72■□□□□ 0.27
HPS4-216ENST00000493455 MAN1C1Q9NR34 630 aa16.72■□□□□ 0.27
HPS4-216ENST00000493455 AFF4Q9UHB7 1163 aaKnown RBP16.72■□□□□ 0.27
HPS4-216ENST00000493455 TSPAN16Q9UKR8 245 aa16.72■□□□□ 0.27
HPS4-216ENST00000493455 CNTN6Q9UQ52 1028 aa16.72■□□□□ 0.27
HPS4-216ENST00000493455 AKR1B15C9JRZ8 316 aaPredicted RBP16.71■□□□□ 0.27
HPS4-216ENST00000493455 LINC01565O15544 149 aa16.71■□□□□ 0.27
HPS4-216ENST00000493455 MED7O43513 233 aa16.71■□□□□ 0.27
HPS4-216ENST00000493455 MFAP3LO75121 409 aa16.71■□□□□ 0.27
HPS4-216ENST00000493455 AP1G2O75843 785 aa16.71■□□□□ 0.27
HPS4-216ENST00000493455 VNN2O95498 520 aa16.71■□□□□ 0.27
HPS4-216ENST00000493455 SKILP12757 684 aa16.71■□□□□ 0.27
HPS4-216ENST00000493455 CYP11B1P15538 503 aa16.71■□□□□ 0.27
HPS4-216ENST00000493455 GRIK1P39086 918 aa16.71■□□□□ 0.27
HPS4-216ENST00000493455 GPR15P49685 360 aa16.71■□□□□ 0.27
HPS4-216ENST00000493455 BPIFB4P59827 614 aa16.71■□□□□ 0.27
HPS4-216ENST00000493455 HYAL1Q12794 435 aa16.71■□□□□ 0.27
HPS4-216ENST00000493455 TSR1Q2NL82 804 aaKnown RBP16.71■□□□□ 0.27
HPS4-216ENST00000493455 E4F1Q66K89 784 aaPredicted RBP16.71■□□□□ 0.27
HPS4-216ENST00000493455 TPGS2Q68CL5 300 aa16.71■□□□□ 0.27
HPS4-216ENST00000493455 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.71■□□□□ 0.27
HPS4-216ENST00000493455 NOP9Q86U38 636 aaKnown RBP16.71■□□□□ 0.27
HPS4-216ENST00000493455 PASD1Q8IV76 773 aa16.71■□□□□ 0.27
HPS4-216ENST00000493455 FUKQ8N0W3 1084 aa16.71■□□□□ 0.27
HPS4-216ENST00000493455 STKLD1Q8NE28 680 aa16.71■□□□□ 0.27
HPS4-216ENST00000493455 SLC7A14Q8TBB6 771 aa16.71■□□□□ 0.27
HPS4-216ENST00000493455 SPPL2BQ8TCT7 592 aa16.71■□□□□ 0.27
HPS4-216ENST00000493455 ZSWIM1Q9BR11 485 aa16.71■□□□□ 0.27
HPS4-216ENST00000493455 CRISPLD1Q9H336 500 aa16.71■□□□□ 0.27
HPS4-216ENST00000493455 LMCD1Q9NZU5 365 aa16.71■□□□□ 0.27
HPS4-216ENST00000493455 HESX1Q9UBX0 185 aa16.71■□□□□ 0.27
HPS4-216ENST00000493455 HCFC2Q9Y5Z7 792 aa16.71■□□□□ 0.27
HPS4-216ENST00000493455 MICAL2O94851 1124 aa16.7■□□□□ 0.26
HPS4-216ENST00000493455 ABLIM3O94929 683 aa16.7■□□□□ 0.26
HPS4-216ENST00000493455 C8AP07357 584 aa16.7■□□□□ 0.26
HPS4-216ENST00000493455 CFHP08603 1231 aa16.7■□□□□ 0.26
HPS4-216ENST00000493455 CCDC172P0C7W6 258 aa16.7■□□□□ 0.26
HPS4-216ENST00000493455 FAM200BP0CF97 657 aa16.7■□□□□ 0.26
HPS4-216ENST00000493455 ATF2P15336 505 aa16.7■□□□□ 0.26
HPS4-216ENST00000493455 CACNA2D1P54289 1103 aa16.7■□□□□ 0.26
HPS4-216ENST00000493455 MAP3K7CLP57077 242 aa16.7■□□□□ 0.26
HPS4-216ENST00000493455 KLHL30Q0D2K2 578 aa16.7■□□□□ 0.26
HPS4-216ENST00000493455 IFRD2Q12894 506 aaPredicted RBP16.7■□□□□ 0.26
HPS4-216ENST00000493455 TBX2Q13207 712 aaPredicted RBP16.7■□□□□ 0.26
HPS4-216ENST00000493455 SKIV2LQ15477 1246 aaKnown RBP16.7■□□□□ 0.26
HPS4-216ENST00000493455 DDR2Q16832 855 aa16.7■□□□□ 0.26
HPS4-216ENST00000493455 GPR153Q6NV75 609 aa16.7■□□□□ 0.26
HPS4-216ENST00000493455 CNGA4Q8IV77 575 aa16.7■□□□□ 0.26
HPS4-216ENST00000493455 GPR152Q8TDT2 470 aa16.7■□□□□ 0.26
HPS4-216ENST00000493455 SLC22A17Q8WUG5 538 aa16.7■□□□□ 0.26
HPS4-216ENST00000493455 ZNF606Q8WXB4 792 aa16.7■□□□□ 0.26
HPS4-216ENST00000493455 SMARCD1Q96GM5 515 aa16.7■□□□□ 0.26
HPS4-216ENST00000493455 HNRNPABQ99729 332 aaKnown RBP16.7■□□□□ 0.26
HPS4-216ENST00000493455 APOL5Q9BWW9 433 aa16.7■□□□□ 0.26
HPS4-216ENST00000493455 FBXW11Q9UKB1 542 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms