RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 TAPT1Q6NXT6 567 aa4.2□□□□□ -1.74
PTCD3-218ENST00000493430 RASAL3Q86YV0 1011 aa4.2□□□□□ -1.74
PTCD3-218ENST00000493430 C1orf162Q8NEQ5 155 aaPredicted RBP4.2□□□□□ -1.74
PTCD3-218ENST00000493430 DDX17Q92841 729 aaKnown RBP4.2□□□□□ -1.74
PTCD3-218ENST00000493430 MRGPRX4Q96LA9 322 aa4.2□□□□□ -1.74
PTCD3-218ENST00000493430 MAN1C1Q9NR34 630 aa4.2□□□□□ -1.74
PTCD3-218ENST00000493430 USP35Q9P2H5 1018 aa4.2□□□□□ -1.74
PTCD3-218ENST00000493430 ZNF70Q9UC06 446 aaPredicted RBP4.2□□□□□ -1.74
PTCD3-218ENST00000493430 LIMCH1Q9UPQ0 1083 aa4.2□□□□□ -1.74
PTCD3-218ENST00000493430 IPPQ9Y573 584 aa4.2□□□□□ -1.74
PTCD3-218ENST00000493430 NR2E3Q9Y5X4 410 aa4.2□□□□□ -1.74
PTCD3-218ENST00000493430 NRAPQ86VF7 1730 aa4.2□□□□□ -1.74
PTCD3-218ENST00000493430 PHRF1Q9P1Y6 1649 aaKnown RBP4.2□□□□□ -1.74
PTCD3-218ENST00000493430 SPATA31A3Q5VYP0 1347 aa4.2□□□□□ -1.74
PTCD3-218ENST00000493430 TOPAZ1Q8N9V7 1692 aa4.19□□□□□ -1.74
PTCD3-218ENST00000493430 NKTRP30414 1462 aaKnown RBP4.19□□□□□ -1.74
PTCD3-218ENST00000493430 A0A0B4J269 797 aa4.19□□□□□ -1.74
PTCD3-218ENST00000493430 KRTAP29-1A8MX34 341 aaPredicted RBP4.19□□□□□ -1.74
PTCD3-218ENST00000493430 VWC2LB2RUY7 222 aa4.19□□□□□ -1.74
PTCD3-218ENST00000493430 F5H697 171 aa4.19□□□□□ -1.74
PTCD3-218ENST00000493430 POLRMTO00411 1230 aaKnown RBP4.19□□□□□ -1.74
PTCD3-218ENST00000493430 HTRA2O43464 458 aaPredicted RBP4.19□□□□□ -1.74
PTCD3-218ENST00000493430 TRIAP1O43715 76 aa4.19□□□□□ -1.74
PTCD3-218ENST00000493430 URI1O94763 535 aaPredicted RBP4.19□□□□□ -1.74
PTCD3-218ENST00000493430 TTLL1O95922 423 aa4.19□□□□□ -1.74
PTCD3-218ENST00000493430 POU3F3P20264 500 aaPredicted RBP4.19□□□□□ -1.74
PTCD3-218ENST00000493430 C5AR1P21730 350 aa4.19□□□□□ -1.74
PTCD3-218ENST00000493430 TLE1Q04724 770 aa4.19□□□□□ -1.74
PTCD3-218ENST00000493430 TUBB3Q13509 450 aa4.19□□□□□ -1.74
PTCD3-218ENST00000493430 IL10RAQ13651 578 aa4.19□□□□□ -1.74
PTCD3-218ENST00000493430 INAVAQ3KP66 663 aa4.19□□□□□ -1.74
PTCD3-218ENST00000493430 SEMA6DQ8NFY4 1073 aa4.19□□□□□ -1.74
PTCD3-218ENST00000493430 POC1BQ8TC44 478 aa4.19□□□□□ -1.74
PTCD3-218ENST00000493430 SCAMP4Q969E2 229 aa4.19□□□□□ -1.74
PTCD3-218ENST00000493430 FAXDC2Q96IV6 333 aa4.19□□□□□ -1.74
PTCD3-218ENST00000493430 PBKQ96KB5 322 aa4.19□□□□□ -1.74
PTCD3-218ENST00000493430 ALG8Q9BVK2 526 aa4.19□□□□□ -1.74
PTCD3-218ENST00000493430 FLRT1Q9NZU1 646 aa4.19□□□□□ -1.74
PTCD3-218ENST00000493430 ADAM21Q9UKJ8 722 aa4.19□□□□□ -1.74
PTCD3-218ENST00000493430 PADI4Q9UM07 663 aa4.19□□□□□ -1.74
PTCD3-218ENST00000493430 PCDHB1Q9Y5F3 818 aa4.19□□□□□ -1.74
PTCD3-218ENST00000493430 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.19□□□□□ -1.74
PTCD3-218ENST00000493430 LAMC1P11047 1609 aa4.19□□□□□ -1.74
PTCD3-218ENST00000493430 AHDC1Q5TGY3 1603 aaPredicted RBP4.19□□□□□ -1.74
PTCD3-218ENST00000493430 ADGRA2Q96PE1 1338 aa4.19□□□□□ -1.74
PTCD3-218ENST00000493430 VIRMAQ69YN4 1812 aaKnown RBP4.18□□□□□ -1.74
PTCD3-218ENST00000493430 ARHGEF17Q96PE2 2063 aaPredicted RBP4.18□□□□□ -1.74
PTCD3-218ENST00000493430 ROCK1Q13464 1354 aa4.18□□□□□ -1.74
PTCD3-218ENST00000493430 CCDC154A6NI56 674 aa4.18□□□□□ -1.74
PTCD3-218ENST00000493430 PROB1E7EW31 1015 aa4.18□□□□□ -1.74
PTCD3-218ENST00000493430 EDNRBP24530 442 aa4.18□□□□□ -1.74
PTCD3-218ENST00000493430 IARSP41252 1262 aaKnown RBP4.18□□□□□ -1.74
PTCD3-218ENST00000493430 GRM1Q13255 1194 aa4.18□□□□□ -1.74
PTCD3-218ENST00000493430 LLGL1Q15334 1064 aa4.18□□□□□ -1.74
PTCD3-218ENST00000493430 C3orf36Q3SXR2 165 aa4.18□□□□□ -1.74
PTCD3-218ENST00000493430 SUMO4Q6EEV6 95 aa4.18□□□□□ -1.74
PTCD3-218ENST00000493430 ZNF425Q6IV72 752 aa4.18□□□□□ -1.74
PTCD3-218ENST00000493430 BHLHA9Q7RTU4 235 aa4.18□□□□□ -1.74
PTCD3-218ENST00000493430 NECAB2Q7Z6G3 386 aa4.18□□□□□ -1.74
PTCD3-218ENST00000493430 PDSS2Q86YH6 399 aa4.18□□□□□ -1.74
PTCD3-218ENST00000493430 CBARPQ8N350 705 aaPredicted RBP4.18□□□□□ -1.74
PTCD3-218ENST00000493430 FAM126AQ9BYI3 521 aaPredicted RBP4.18□□□□□ -1.74
PTCD3-218ENST00000493430 TPSD1Q9BZJ3 242 aa4.18□□□□□ -1.74
PTCD3-218ENST00000493430 BRD9Q9H8M2 597 aa4.18□□□□□ -1.74
PTCD3-218ENST00000493430 GNL3LQ9NVN8 582 aaKnown RBP4.18□□□□□ -1.74
PTCD3-218ENST00000493430 SIDT1Q9NXL6 827 aaKnown RBP4.18□□□□□ -1.74
PTCD3-218ENST00000493430 MRFAP1Q9Y605 127 aa4.18□□□□□ -1.74
PTCD3-218ENST00000493430 ALS2Q96Q42 1657 aa4.18□□□□□ -1.74
PTCD3-218ENST00000493430 TRPM1Q7Z4N2 1603 aa4.17□□□□□ -1.74
PTCD3-218ENST00000493430 LTN1O94822 1766 aa4.17□□□□□ -1.74
PTCD3-218ENST00000493430 METP08581 1390 aa4.17□□□□□ -1.74
PTCD3-218ENST00000493430 E9PLN8 166 aa4.17□□□□□ -1.74
PTCD3-218ENST00000493430 XPOTO43592 962 aaKnown RBP4.17□□□□□ -1.74
PTCD3-218ENST00000493430 GNAI3P08754 354 aa4.17□□□□□ -1.74
PTCD3-218ENST00000493430 NR2F6P10588 404 aa4.17□□□□□ -1.74
PTCD3-218ENST00000493430 CYP2C19P33261 490 aa4.17□□□□□ -1.74
PTCD3-218ENST00000493430 CCT8P50990 548 aa4.17□□□□□ -1.74
PTCD3-218ENST00000493430 GNAI1P63096 354 aa4.17□□□□□ -1.74
PTCD3-218ENST00000493430 KIF23Q02241 960 aaPredicted RBP4.17□□□□□ -1.74
PTCD3-218ENST00000493430 SLC10A2Q12908 348 aaPredicted RBP4.17□□□□□ -1.74
PTCD3-218ENST00000493430 CCDC93Q567U6 631 aa4.17□□□□□ -1.74
PTCD3-218ENST00000493430 PLAC9Q5JTB6 97 aa4.17□□□□□ -1.74
PTCD3-218ENST00000493430 SLC30A10Q6XR72 485 aa4.17□□□□□ -1.74
PTCD3-218ENST00000493430 TTC7BQ86TV6 843 aa4.17□□□□□ -1.74
PTCD3-218ENST00000493430 DDX42Q86XP3 938 aaKnown RBP eCLIP4.17□□□□□ -1.74
PTCD3-218ENST00000493430 CAMKK1Q8N5S9 505 aa4.17□□□□□ -1.74
PTCD3-218ENST00000493430 KAT5Q92993 513 aa4.17□□□□□ -1.74
PTCD3-218ENST00000493430 RFKQ969G6 155 aa4.17□□□□□ -1.74
PTCD3-218ENST00000493430 COA7Q96BR5 231 aa4.17□□□□□ -1.74
PTCD3-218ENST00000493430 DMRTA2Q96SC8 542 aa4.17□□□□□ -1.74
PTCD3-218ENST00000493430 OSBPL9Q96SU4 736 aa4.17□□□□□ -1.74
PTCD3-218ENST00000493430 VKORC1Q9BQB6 163 aa4.17□□□□□ -1.74
PTCD3-218ENST00000493430 AMBRA1Q9C0C7 1298 aa4.17□□□□□ -1.74
PTCD3-218ENST00000493430 CFAP20Q9Y6A4 193 aaKnown RBP4.17□□□□□ -1.74
PTCD3-218ENST00000493430 HFM1A2PYH4 1435 aa4.17□□□□□ -1.74
PTCD3-218ENST00000493430 COL22A1Q8NFW1 1626 aaPredicted RBP4.17□□□□□ -1.74
PTCD3-218ENST00000493430 KAT6BQ8WYB5 2073 aa4.17□□□□□ -1.74
PTCD3-218ENST00000493430 KIF1AQ12756 1690 aa4.16□□□□□ -1.74
PTCD3-218ENST00000493430 PLEKHG1Q9ULL1 1385 aa4.16□□□□□ -1.74
PTCD3-218ENST00000493430 PLEKHH1Q9ULM0 1364 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms