RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 CLUHO75153 1309 aa8.65□□□□□ -1.02
TM4SF1-204ENST00000493348 PTPRDP23468 1912 aa8.65□□□□□ -1.02
TM4SF1-204ENST00000493348 MYBPHLA2RUH7 354 aa8.65□□□□□ -1.02
TM4SF1-204ENST00000493348 GTPBP10A4D1E9 387 aaKnown RBP8.65□□□□□ -1.02
TM4SF1-204ENST00000493348 TPM3P06753 285 aa8.65□□□□□ -1.02
TM4SF1-204ENST00000493348 POU2F2P09086 479 aa8.65□□□□□ -1.02
TM4SF1-204ENST00000493348 CSH1P0DML2 217 aa8.65□□□□□ -1.02
TM4SF1-204ENST00000493348 CSH2P0DML3 217 aa8.65□□□□□ -1.02
TM4SF1-204ENST00000493348 HAPLN1P10915 354 aaPredicted RBP8.65□□□□□ -1.02
TM4SF1-204ENST00000493348 KRT5P13647 590 aa8.65□□□□□ -1.02
TM4SF1-204ENST00000493348 IL9P15248 144 aa8.65□□□□□ -1.02
TM4SF1-204ENST00000493348 CD19P15391 556 aa8.65□□□□□ -1.02
TM4SF1-204ENST00000493348 BDNFP23560 247 aa8.65□□□□□ -1.02
TM4SF1-204ENST00000493348 FSHRP23945 695 aa8.65□□□□□ -1.02
TM4SF1-204ENST00000493348 LMO2P25791 158 aa8.65□□□□□ -1.02
TM4SF1-204ENST00000493348 USP8P40818 1118 aa8.65□□□□□ -1.02
TM4SF1-204ENST00000493348 ASPAP45381 313 aa8.65□□□□□ -1.02
TM4SF1-204ENST00000493348 MCCD1P59942 119 aaPredicted RBP8.65□□□□□ -1.02
TM4SF1-204ENST00000493348 CFAP221Q4G0U5 840 aa8.65□□□□□ -1.02
TM4SF1-204ENST00000493348 ARHGAP15Q53QZ3 475 aa8.65□□□□□ -1.02
TM4SF1-204ENST00000493348 VSTM1Q6UX27 236 aa8.65□□□□□ -1.02
TM4SF1-204ENST00000493348 GET4Q7L5D6 327 aaPredicted RBP8.65□□□□□ -1.02
TM4SF1-204ENST00000493348 GRASPQ7Z6J2 395 aaPredicted RBP8.65□□□□□ -1.02
TM4SF1-204ENST00000493348 ACOT1Q86TX2 421 aa8.65□□□□□ -1.02
TM4SF1-204ENST00000493348 PLCD3Q8N3E9 789 aa8.65□□□□□ -1.02
TM4SF1-204ENST00000493348 TATDN2Q93075 761 aa8.65□□□□□ -1.02
TM4SF1-204ENST00000493348 ELMO3Q96BJ8 720 aa8.65□□□□□ -1.02
TM4SF1-204ENST00000493348 SMARCD1Q96GM5 515 aa8.65□□□□□ -1.02
TM4SF1-204ENST00000493348 TMEM176AQ96HP8 235 aa8.65□□□□□ -1.02
TM4SF1-204ENST00000493348 RPGRIP1Q96KN7 1286 aa8.65□□□□□ -1.02
TM4SF1-204ENST00000493348 BCO2Q9BYV7 579 aa8.65□□□□□ -1.02
TM4SF1-204ENST00000493348 RHOBTB2Q9BYZ6 727 aa8.65□□□□□ -1.02
TM4SF1-204ENST00000493348 S1PR5Q9H228 398 aa8.65□□□□□ -1.02
TM4SF1-204ENST00000493348 TSPY26PQ9H489 355 aa8.65□□□□□ -1.02
TM4SF1-204ENST00000493348 APOBEC3GQ9HC16 384 aaKnown RBP8.65□□□□□ -1.02
TM4SF1-204ENST00000493348 UBE2TQ9NPD8 197 aaPredicted RBP8.65□□□□□ -1.02
TM4SF1-204ENST00000493348 CISHQ9NSE2 258 aa8.65□□□□□ -1.02
TM4SF1-204ENST00000493348 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.65□□□□□ -1.02
TM4SF1-204ENST00000493348 HESX1Q9UBX0 185 aa8.65□□□□□ -1.02
TM4SF1-204ENST00000493348 MAGED2Q9UNF1 606 aaPredicted RBP8.65□□□□□ -1.02
TM4SF1-204ENST00000493348 MRPS23Q9Y3D9 190 aaKnown RBP8.65□□□□□ -1.02
TM4SF1-204ENST00000493348 CILPO75339 1184 aa8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 AP1G2O75843 785 aa8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 SEC24AO95486 1093 aa8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 RHOP08100 348 aa8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 FAM200BP0CF97 657 aa8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 MYL4P12829 197 aa8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 RFX1P22670 979 aa8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 SP100P23497 879 aaPredicted RBP8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 CYP2F1P24903 491 aa8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 ADORA2BP29275 332 aa8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 CDC25CP30307 473 aa8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 MAGEA11P43364 429 aa8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 CDR1P51861 262 aa8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 COPB1P53618 953 aaKnown RBP8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 GCNT1Q02742 428 aa8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 UBXN1Q04323 297 aa8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 INCA1Q0VD86 236 aa8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 ORC1Q13415 861 aa8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 KRT31Q15323 416 aa8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 STILQ15468 1287 aa8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 ARHGAP44Q17R89 818 aa8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 SGO2Q562F6 1265 aa8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 SCARA3Q6AZY7 606 aa8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 ASTLQ6HA08 431 aaPredicted RBP8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 FAM171BQ6P995 826 aa8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 TRIM65Q6PJ69 517 aa8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 TMEM270Q6UE05 265 aa8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 RRAGAQ7L523 313 aa8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 LIMS2Q7Z4I7 341 aa8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 LRRTM3Q86VH5 581 aa8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 ADHFE1Q8IWW8 467 aa8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 ADAMTS19Q8TE59 1207 aa8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 GIPC2Q8TF65 315 aa8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 CYFIP2Q96F07 1278 aa8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 PCED1BQ96HM7 432 aa8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 CEP295NLQ96MC4 621 aa8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 UHRF1Q96T88 793 aaPredicted RBP8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 RTP3Q9BQQ7 232 aa8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 PDCL3Q9H2J4 239 aa8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 DPEP3Q9H4B8 488 aa8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 POMKQ9H5K3 350 aa8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 WDR6Q9NNW5 1121 aaKnown RBP8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 FAM49BQ9NUQ9 324 aa8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 APEX2Q9UBZ4 518 aa8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 KIAA1257Q9ULG3 409 aa8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 ZFP37Q9Y6Q3 630 aaPredicted RBP8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 DOCK6Q96HP0 2047 aa8.64□□□□□ -1.03
TM4SF1-204ENST00000493348 SPTBN5Q9NRC6 3674 aaKnown RBP8.63□□□□□ -1.03
TM4SF1-204ENST00000493348 ATMINO43313 823 aaPredicted RBP8.63□□□□□ -1.03
TM4SF1-204ENST00000493348 MED7O43513 233 aa8.63□□□□□ -1.03
TM4SF1-204ENST00000493348 HCRTO43612 131 aa8.63□□□□□ -1.03
TM4SF1-204ENST00000493348 ATP2C2O75185 946 aa8.63□□□□□ -1.03
TM4SF1-204ENST00000493348 SOAT2O75908 522 aa8.63□□□□□ -1.03
TM4SF1-204ENST00000493348 RTN3O95197 1032 aaPredicted RBP8.63□□□□□ -1.03
TM4SF1-204ENST00000493348 IFRD2Q12894 506 aaPredicted RBP8.63□□□□□ -1.03
TM4SF1-204ENST00000493348 RAPGEF1Q13905 1077 aa8.63□□□□□ -1.03
TM4SF1-204ENST00000493348 DDR2Q16832 855 aa8.63□□□□□ -1.03
TM4SF1-204ENST00000493348 CDKAL1Q5VV42 579 aa8.63□□□□□ -1.03
TM4SF1-204ENST00000493348 LRSAM1Q6UWE0 723 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms