RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 ZNF252P-AS1Q0IIN9 211 aa11.83□□□□□ -0.52
SNRNP200-207ENST00000493271 USP4Q13107 963 aa11.83□□□□□ -0.52
SNRNP200-207ENST00000493271 ZNF77Q15935 545 aa11.83□□□□□ -0.52
SNRNP200-207ENST00000493271 CFAP221Q4G0U5 840 aa11.83□□□□□ -0.52
SNRNP200-207ENST00000493271 HSF5Q4G112 596 aaPredicted RBP11.83□□□□□ -0.52
SNRNP200-207ENST00000493271 PMS2CLQ68D20 193 aa11.83□□□□□ -0.52
SNRNP200-207ENST00000493271 SLC39A4Q6P5W5 647 aa11.83□□□□□ -0.52
SNRNP200-207ENST00000493271 RASSF3Q86WH2 238 aa11.83□□□□□ -0.52
SNRNP200-207ENST00000493271 CNOT6LQ96LI5 555 aaKnown RBP11.83□□□□□ -0.52
SNRNP200-207ENST00000493271 PLIN2Q99541 437 aa11.83□□□□□ -0.52
SNRNP200-207ENST00000493271 TMEM9BQ9NQ34 198 aa11.83□□□□□ -0.52
SNRNP200-207ENST00000493271 EHD2Q9NZN4 543 aa11.83□□□□□ -0.52
SNRNP200-207ENST00000493271 MAGED2Q9UNF1 606 aaPredicted RBP11.83□□□□□ -0.52
SNRNP200-207ENST00000493271 FAM208BQ5VWN6 2430 aa11.83□□□□□ -0.52
SNRNP200-207ENST00000493271 LAMA1P25391 3075 aa11.83□□□□□ -0.52
SNRNP200-207ENST00000493271 DENND4CQ5VZ89 1909 aa11.82□□□□□ -0.52
SNRNP200-207ENST00000493271 C4orf47A7E2U8 309 aa11.82□□□□□ -0.52
SNRNP200-207ENST00000493271 HUS1O60921 280 aa11.82□□□□□ -0.52
SNRNP200-207ENST00000493271 ALDH1A2O94788 518 aa11.82□□□□□ -0.52
SNRNP200-207ENST00000493271 PCSK1P29120 753 aa11.82□□□□□ -0.52
SNRNP200-207ENST00000493271 LHX1P48742 406 aa11.82□□□□□ -0.52
SNRNP200-207ENST00000493271 DGKEP52429 567 aa11.82□□□□□ -0.52
SNRNP200-207ENST00000493271 LMAN2Q12907 356 aa11.82□□□□□ -0.52
SNRNP200-207ENST00000493271 PSMD2Q13200 908 aa11.82□□□□□ -0.52
SNRNP200-207ENST00000493271 KCNB1Q14721 858 aa11.82□□□□□ -0.52
SNRNP200-207ENST00000493271 EML3Q32P44 896 aa11.82□□□□□ -0.52
SNRNP200-207ENST00000493271 INTS6LQ5JSJ4 861 aaKnown RBP11.82□□□□□ -0.52
SNRNP200-207ENST00000493271 SPDYCQ5MJ68 293 aa11.82□□□□□ -0.52
SNRNP200-207ENST00000493271 LMBRD2Q68DH5 695 aaPredicted RBP11.82□□□□□ -0.52
SNRNP200-207ENST00000493271 MCTP1Q6DN14 999 aa11.82□□□□□ -0.52
SNRNP200-207ENST00000493271 TCEAL6Q6IPX3 200 aa11.82□□□□□ -0.52
SNRNP200-207ENST00000493271 CYP2U1Q7Z449 544 aa11.82□□□□□ -0.52
SNRNP200-207ENST00000493271 LRRC52Q8N7C0 313 aa11.82□□□□□ -0.52
SNRNP200-207ENST00000493271 CACTINQ8WUQ7 758 aaKnown RBP11.82□□□□□ -0.52
SNRNP200-207ENST00000493271 TCEAL3Q969E4 200 aa11.82□□□□□ -0.52
SNRNP200-207ENST00000493271 FIZ1Q96SL8 496 aa11.82□□□□□ -0.52
SNRNP200-207ENST00000493271 PI4K2AQ9BTU6 479 aa11.82□□□□□ -0.52
SNRNP200-207ENST00000493271 ADAM33Q9BZ11 813 aa11.82□□□□□ -0.52
SNRNP200-207ENST00000493271 SMOC1Q9H4F8 434 aa11.82□□□□□ -0.52
SNRNP200-207ENST00000493271 FBRSL1Q9HCM7 1045 aaKnown RBP11.82□□□□□ -0.52
SNRNP200-207ENST00000493271 SEL1LQ9UBV2 794 aa11.82□□□□□ -0.52
SNRNP200-207ENST00000493271 EVLQ9UI08 416 aaPredicted RBP11.82□□□□□ -0.52
SNRNP200-207ENST00000493271 ARHGAP26Q9UNA1 814 aa11.82□□□□□ -0.52
SNRNP200-207ENST00000493271 EXOC7Q9UPT5 735 aa11.82□□□□□ -0.52
SNRNP200-207ENST00000493271 FRYQ5TBA9 3013 aa11.81□□□□□ -0.52
SNRNP200-207ENST00000493271 LDHAP00338 332 aaKnown RBP11.81□□□□□ -0.52
SNRNP200-207ENST00000493271 LONP1P36776 959 aaKnown RBP11.81□□□□□ -0.52
SNRNP200-207ENST00000493271 EIF2DP41214 584 aaKnown RBP11.81□□□□□ -0.52
SNRNP200-207ENST00000493271 MAGEA11P43364 429 aa11.81□□□□□ -0.52
SNRNP200-207ENST00000493271 PPP3CCP48454 512 aa11.81□□□□□ -0.52
SNRNP200-207ENST00000493271 MRPS21P82921 87 aaKnown RBP11.81□□□□□ -0.52
SNRNP200-207ENST00000493271 BYSLQ13895 437 aaKnown RBP11.81□□□□□ -0.52
SNRNP200-207ENST00000493271 SH3PXD2AQ5TCZ1 1133 aa11.81□□□□□ -0.52
SNRNP200-207ENST00000493271 C4orf50Q6ZRC1 276 aa11.81□□□□□ -0.52
SNRNP200-207ENST00000493271 DPH6Q7L8W6 267 aa11.81□□□□□ -0.52
SNRNP200-207ENST00000493271 EFCAB13Q8IY85 973 aa11.81□□□□□ -0.52
SNRNP200-207ENST00000493271 PDCL2Q8N4E4 241 aa11.81□□□□□ -0.52
SNRNP200-207ENST00000493271 TOP6BLQ8N6T0 577 aa11.81□□□□□ -0.52
SNRNP200-207ENST00000493271 KRI1Q8N9T8 703 aaKnown RBP11.81□□□□□ -0.52
SNRNP200-207ENST00000493271 RASSF8Q8NHQ8 419 aa11.81□□□□□ -0.52
SNRNP200-207ENST00000493271 RIN3Q8TB24 985 aa11.81□□□□□ -0.52
SNRNP200-207ENST00000493271 POMGNT1Q8WZA1 660 aa11.81□□□□□ -0.52
SNRNP200-207ENST00000493271 RAD54LQ92698 747 aa11.81□□□□□ -0.52
SNRNP200-207ENST00000493271 ZHX3Q9H4I2 956 aa11.81□□□□□ -0.52
SNRNP200-207ENST00000493271 TRPC7Q9HCX4 862 aa11.81□□□□□ -0.52
SNRNP200-207ENST00000493271 GDAP2Q9NXN4 497 aa11.81□□□□□ -0.52
SNRNP200-207ENST00000493271 DDX43Q9NXZ2 648 aaKnown RBP11.81□□□□□ -0.52
SNRNP200-207ENST00000493271 ZMIZ1Q9ULJ6 1067 aa11.81□□□□□ -0.52
SNRNP200-207ENST00000493271 MMP17Q9ULZ9 603 aa11.81□□□□□ -0.52
SNRNP200-207ENST00000493271 EML5Q05BV3 1969 aa11.81□□□□□ -0.52
SNRNP200-207ENST00000493271 SCN1AP35498 2009 aa11.81□□□□□ -0.52
SNRNP200-207ENST00000493271 OBSL1O75147 1896 aa11.8□□□□□ -0.52
SNRNP200-207ENST00000493271 ANKRD63C9JTQ0 380 aa11.8□□□□□ -0.52
SNRNP200-207ENST00000493271 H3BQV1 296 aa11.8□□□□□ -0.52
SNRNP200-207ENST00000493271 SLC9A3R1O14745 358 aaPredicted RBP11.8□□□□□ -0.52
SNRNP200-207ENST00000493271 TADA3O75528 432 aa11.8□□□□□ -0.52
SNRNP200-207ENST00000493271 NEFLP07196 543 aa11.8□□□□□ -0.52
SNRNP200-207ENST00000493271 FOXC1Q12948 553 aa11.8□□□□□ -0.52
SNRNP200-207ENST00000493271 DHX8Q14562 1220 aaKnown RBP11.8□□□□□ -0.52
SNRNP200-207ENST00000493271 MAPRE1Q15691 268 aaKnown RBP11.8□□□□□ -0.52
SNRNP200-207ENST00000493271 DDR2Q16832 855 aa11.8□□□□□ -0.52
SNRNP200-207ENST00000493271 VSTM1Q6UX27 236 aa11.8□□□□□ -0.52
SNRNP200-207ENST00000493271 CRELD2Q6UXH1 353 aaPredicted RBP11.8□□□□□ -0.52
SNRNP200-207ENST00000493271 ZNF720Q7Z2F6 126 aa11.8□□□□□ -0.52
SNRNP200-207ENST00000493271 SPATA2LQ8IUW3 424 aaPredicted RBP11.8□□□□□ -0.52
SNRNP200-207ENST00000493271 BRSK2Q8IWQ3 736 aa11.8□□□□□ -0.52
SNRNP200-207ENST00000493271 USP33Q8TEY7 942 aa11.8□□□□□ -0.52
SNRNP200-207ENST00000493271 LARP4BQ92615 738 aaKnown RBP11.8□□□□□ -0.52
SNRNP200-207ENST00000493271 EZH1Q92800 747 aaPredicted RBP11.8□□□□□ -0.52
SNRNP200-207ENST00000493271 SPACA7Q96KW9 195 aa11.8□□□□□ -0.52
SNRNP200-207ENST00000493271 SLC32A1Q9H598 525 aa11.8□□□□□ -0.52
SNRNP200-207ENST00000493271 BLOC1S4Q9NUP1 217 aa11.8□□□□□ -0.52
SNRNP200-207ENST00000493271 TMLHEQ9NVH6 421 aa11.8□□□□□ -0.52
SNRNP200-207ENST00000493271 GCNT4Q9P109 453 aa11.8□□□□□ -0.52
SNRNP200-207ENST00000493271 ITGA11Q9UKX5 1188 aa11.8□□□□□ -0.52
SNRNP200-207ENST00000493271 WASF3Q9UPY6 502 aa11.8□□□□□ -0.52
SNRNP200-207ENST00000493271 R3HCC1Q9Y3T6 440 aaKnown RBP11.8□□□□□ -0.52
SNRNP200-207ENST00000493271 WNT6Q9Y6F9 365 aa11.8□□□□□ -0.52
SNRNP200-207ENST00000493271 ANK1P16157 1881 aa11.8□□□□□ -0.52
SNRNP200-207ENST00000493271 TCHHQ07283 1943 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms