RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 PDXKO00764 312 aa19.28■□□□□ 0.68
PTPRU-207ENST00000492954 CHADO15335 359 aa19.28■□□□□ 0.68
PTPRU-207ENST00000492954 PHACTR2O75167 634 aa19.28■□□□□ 0.68
PTPRU-207ENST00000492954 RHOBTB3O94955 611 aa19.28■□□□□ 0.68
PTPRU-207ENST00000492954 NR3C1P04150 777 aa19.28■□□□□ 0.68
PTPRU-207ENST00000492954 TNNC1P63316 161 aa19.28■□□□□ 0.68
PTPRU-207ENST00000492954 FCHO2Q0JRZ9 810 aa19.28■□□□□ 0.68
PTPRU-207ENST00000492954 BIRC3Q13489 604 aa19.28■□□□□ 0.68
PTPRU-207ENST00000492954 WDR72Q3MJ13 1102 aa19.28■□□□□ 0.68
PTPRU-207ENST00000492954 TDRD10Q5VZ19 366 aaKnown RBP19.28■□□□□ 0.68
PTPRU-207ENST00000492954 SCN4BQ8IWT1 228 aa19.28■□□□□ 0.68
PTPRU-207ENST00000492954 CCDC47Q96A33 483 aaKnown RBP19.28■□□□□ 0.68
PTPRU-207ENST00000492954 NELL2Q99435 816 aa19.28■□□□□ 0.68
PTPRU-207ENST00000492954 SMG9Q9H0W8 520 aaKnown RBP19.28■□□□□ 0.68
PTPRU-207ENST00000492954 NDRG2Q9UN36 371 aaKnown RBP19.28■□□□□ 0.68
PTPRU-207ENST00000492954 MRPS17Q9Y2R5 130 aaKnown RBP19.28■□□□□ 0.68
PTPRU-207ENST00000492954 PIAS3Q9Y6X2 628 aa19.28■□□□□ 0.68
PTPRU-207ENST00000492954 SLC38A8A6NNN8 435 aa19.27■□□□□ 0.68
PTPRU-207ENST00000492954 TACC1O75410 805 aa19.27■□□□□ 0.68
PTPRU-207ENST00000492954 NOL4O94818 638 aa19.27■□□□□ 0.68
PTPRU-207ENST00000492954 ZNF202O95125 648 aa19.27■□□□□ 0.68
PTPRU-207ENST00000492954 WEE1P30291 646 aa19.27■□□□□ 0.68
PTPRU-207ENST00000492954 C4orf50Q6ZRC1 276 aa19.27■□□□□ 0.68
PTPRU-207ENST00000492954 ASCL5Q7RTU5 278 aa19.27■□□□□ 0.68
PTPRU-207ENST00000492954 CMTM8Q8IZV2 173 aa19.27■□□□□ 0.68
PTPRU-207ENST00000492954 MAB21L3Q8N8X9 362 aa19.27■□□□□ 0.68
PTPRU-207ENST00000492954 OR6B3Q8NGW1 331 aa19.27■□□□□ 0.68
PTPRU-207ENST00000492954 TMEM174Q8WUU8 243 aa19.27■□□□□ 0.68
PTPRU-207ENST00000492954 SYAP1Q96A49 352 aaPredicted RBP19.27■□□□□ 0.68
PTPRU-207ENST00000492954 CLDN23Q96B33 292 aa19.27■□□□□ 0.68
PTPRU-207ENST00000492954 ZFYVE19Q96K21 471 aa19.27■□□□□ 0.68
PTPRU-207ENST00000492954 SNX25Q9H3E2 840 aa19.27■□□□□ 0.68
PTPRU-207ENST00000492954 SPATA6Q9NWH7 488 aaPredicted RBP19.27■□□□□ 0.68
PTPRU-207ENST00000492954 OBP2AQ9NY56 170 aa19.27■□□□□ 0.68
PTPRU-207ENST00000492954 MAGEC2Q9UBF1 373 aaPredicted RBP19.27■□□□□ 0.68
PTPRU-207ENST00000492954 NXF1Q9UBU9 619 aaKnown RBP19.27■□□□□ 0.68
PTPRU-207ENST00000492954 COL4A2P08572 1712 aa19.26■□□□□ 0.67
PTPRU-207ENST00000492954 MAN2B1O00754 1011 aa19.26■□□□□ 0.67
PTPRU-207ENST00000492954 TADA3O75528 432 aa19.26■□□□□ 0.67
PTPRU-207ENST00000492954 STAU1O95793 577 aaKnown RBP19.26■□□□□ 0.67
PTPRU-207ENST00000492954 C4BPAP04003 597 aaKnown RBP19.26■□□□□ 0.67
PTPRU-207ENST00000492954 BDNFP23560 247 aa19.26■□□□□ 0.67
PTPRU-207ENST00000492954 ATICP31939 592 aa19.26■□□□□ 0.67
PTPRU-207ENST00000492954 GNL1P36915 607 aaPredicted RBP19.26■□□□□ 0.67
PTPRU-207ENST00000492954 MAGEA11P43364 429 aa19.26■□□□□ 0.67
PTPRU-207ENST00000492954 DLG4P78352 724 aa19.26■□□□□ 0.67
PTPRU-207ENST00000492954 CLDN10P78369 228 aa19.26■□□□□ 0.67
PTPRU-207ENST00000492954 CYP27A1Q02318 531 aa19.26■□□□□ 0.67
PTPRU-207ENST00000492954 FZD5Q13467 585 aa19.26■□□□□ 0.67
PTPRU-207ENST00000492954 MAPRE1Q15691 268 aaKnown RBP19.26■□□□□ 0.67
PTPRU-207ENST00000492954 MDH1BQ5I0G3 518 aa19.26■□□□□ 0.67
PTPRU-207ENST00000492954 CEP135Q66GS9 1140 aa19.26■□□□□ 0.67
PTPRU-207ENST00000492954 TXNDC8Q6A555 127 aa19.26■□□□□ 0.67
PTPRU-207ENST00000492954 MAML2Q8IZL2 1156 aaPredicted RBP19.26■□□□□ 0.67
PTPRU-207ENST00000492954 ZNF687Q8N1G0 1237 aa19.26■□□□□ 0.67
PTPRU-207ENST00000492954 CSGALNACT1Q8TDX6 532 aa19.26■□□□□ 0.67
PTPRU-207ENST00000492954 FAM3CQ92520 227 aa19.26■□□□□ 0.67
PTPRU-207ENST00000492954 MRPS31Q92665 395 aaKnown RBP19.26■□□□□ 0.67
PTPRU-207ENST00000492954 ELMO3Q96BJ8 720 aa19.26■□□□□ 0.67
PTPRU-207ENST00000492954 UXTQ9UBK9 157 aaPredicted RBP19.26■□□□□ 0.67
PTPRU-207ENST00000492954 MAPK8IP1Q9UQF2 711 aa19.26■□□□□ 0.67
PTPRU-207ENST00000492954 PRR23AA6NEV1 266 aa19.25■□□□□ 0.67
PTPRU-207ENST00000492954 NCAM2O15394 837 aa19.25■□□□□ 0.67
PTPRU-207ENST00000492954 CALUO43852 315 aaPredicted RBP19.25■□□□□ 0.67
PTPRU-207ENST00000492954 CLSTN1O94985 981 aa19.25■□□□□ 0.67
PTPRU-207ENST00000492954 VNN1O95497 513 aa19.25■□□□□ 0.67
PTPRU-207ENST00000492954 SP9P0CG40 484 aa19.25■□□□□ 0.67
PTPRU-207ENST00000492954 DDX6P26196 483 aaKnown RBP eCLIP19.25■□□□□ 0.67
PTPRU-207ENST00000492954 SOX9P48436 509 aa19.25■□□□□ 0.67
PTPRU-207ENST00000492954 AP3M2P53677 418 aa19.25■□□□□ 0.67
PTPRU-207ENST00000492954 NCOA4Q13772 614 aa19.25■□□□□ 0.67
PTPRU-207ENST00000492954 TTC8Q8TAM2 541 aa19.25■□□□□ 0.67
PTPRU-207ENST00000492954 MYCBPAPQ8TBZ2 947 aa19.25■□□□□ 0.67
PTPRU-207ENST00000492954 BPIFB1Q8TDL5 484 aa19.25■□□□□ 0.67
PTPRU-207ENST00000492954 TRMT2BQ96GJ1 504 aaKnown RBP19.25■□□□□ 0.67
PTPRU-207ENST00000492954 PCED1BQ96HM7 432 aa19.25■□□□□ 0.67
PTPRU-207ENST00000492954 MYRFLQ96LU7 910 aa19.25■□□□□ 0.67
PTPRU-207ENST00000492954 DPEP3Q9H4B8 488 aa19.25■□□□□ 0.67
PTPRU-207ENST00000492954 SMYD3Q9H7B4 428 aa19.25■□□□□ 0.67
PTPRU-207ENST00000492954 ZMYM5Q9UJ78 669 aa19.25■□□□□ 0.67
PTPRU-207ENST00000492954 TRAF3IP3Q9Y228 551 aa19.25■□□□□ 0.67
PTPRU-207ENST00000492954 CCL26Q9Y258 94 aa19.25■□□□□ 0.67
PTPRU-207ENST00000492954 CACNA1IQ9P0X4 2223 aa19.25■□□□□ 0.67
PTPRU-207ENST00000492954 MIA3Q5JRA6 1907 aa19.25■□□□□ 0.67
PTPRU-207ENST00000492954 TICRRQ7Z2Z1 1910 aa19.25■□□□□ 0.67
PTPRU-207ENST00000492954 RIF1Q5UIP0 2472 aaKnown RBP19.24■□□□□ 0.67
PTPRU-207ENST00000492954 LAMTOR5O43504 91 aa19.24■□□□□ 0.67
PTPRU-207ENST00000492954 FAM163BP0C2L3 166 aa19.24■□□□□ 0.67
PTPRU-207ENST00000492954 CCNE1P24864 410 aa19.24■□□□□ 0.67
PTPRU-207ENST00000492954 AVPR1AP37288 418 aa19.24■□□□□ 0.67
PTPRU-207ENST00000492954 GRIK1P39086 918 aa19.24■□□□□ 0.67
PTPRU-207ENST00000492954 MAGEA9P43362 315 aa19.24■□□□□ 0.67
PTPRU-207ENST00000492954 RPS9P46781 194 aaKnown RBP19.24■□□□□ 0.67
PTPRU-207ENST00000492954 KPNA1P52294 538 aaPredicted RBP19.24■□□□□ 0.67
PTPRU-207ENST00000492954 KCNB1Q14721 858 aa19.24■□□□□ 0.67
PTPRU-207ENST00000492954 ZNF699Q32M78 642 aa19.24■□□□□ 0.67
PTPRU-207ENST00000492954 ARHGAP29Q52LW3 1261 aa19.24■□□□□ 0.67
PTPRU-207ENST00000492954 VSTM1Q6UX27 236 aa19.24■□□□□ 0.67
PTPRU-207ENST00000492954 SCARA5Q6ZMJ2 495 aa19.24■□□□□ 0.67
PTPRU-207ENST00000492954 MON1AQ86VX9 555 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms