RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 PTPN1P18031 435 aaKnown RBP14.91□□□□□ -0.02
PDZRN3-210ENST00000492909 TYMPP19971 482 aa14.91□□□□□ -0.02
PDZRN3-210ENST00000492909 MMP8P22894 467 aa14.91□□□□□ -0.02
PDZRN3-210ENST00000492909 SLC11A1P49279 550 aa14.91□□□□□ -0.02
PDZRN3-210ENST00000492909 PSMC1P62191 440 aaKnown RBP14.91□□□□□ -0.02
PDZRN3-210ENST00000492909 C1QBPQ07021 282 aaKnown RBP14.91□□□□□ -0.02
PDZRN3-210ENST00000492909 GOLGA7BQ2TAP0 167 aa14.91□□□□□ -0.02
PDZRN3-210ENST00000492909 TMEM240Q5SV17 173 aa14.91□□□□□ -0.02
PDZRN3-210ENST00000492909 WDTC1Q8N5D0 677 aa14.91□□□□□ -0.02
PDZRN3-210ENST00000492909 SLC35G2Q8TBE7 412 aa14.91□□□□□ -0.02
PDZRN3-210ENST00000492909 C11orf70Q9BRQ4 267 aa14.91□□□□□ -0.02
PDZRN3-210ENST00000492909 HESX1Q9UBX0 185 aa14.91□□□□□ -0.02
PDZRN3-210ENST00000492909 LAMA2P24043 3122 aaKnown RBP14.91□□□□□ -0.02
PDZRN3-210ENST00000492909 COL4A6Q14031 1691 aa14.91□□□□□ -0.02
PDZRN3-210ENST00000492909 ZRANB2O95218 330 aaKnown RBP eCLIP14.9□□□□□ -0.02
PDZRN3-210ENST00000492909 CYP1A2P05177 515 aa14.9□□□□□ -0.02
PDZRN3-210ENST00000492909 GALTP07902 379 aa14.9□□□□□ -0.02
PDZRN3-210ENST00000492909 ACAT1P24752 427 aaKnown RBP14.9□□□□□ -0.02
PDZRN3-210ENST00000492909 SHHQ15465 462 aa14.9□□□□□ -0.02
PDZRN3-210ENST00000492909 LIN9Q5TKA1 542 aa14.9□□□□□ -0.02
PDZRN3-210ENST00000492909 OVOS1Q6IE37 1185 aa14.9□□□□□ -0.02
PDZRN3-210ENST00000492909 MMS22LQ6ZRQ5 1243 aa14.9□□□□□ -0.02
PDZRN3-210ENST00000492909 RSRC2Q7L4I2 434 aaKnown RBP14.9□□□□□ -0.02
PDZRN3-210ENST00000492909 MSANTD4Q8NCY6 345 aa14.9□□□□□ -0.02
PDZRN3-210ENST00000492909 ZNF689Q96CS4 500 aaPredicted RBP14.9□□□□□ -0.02
PDZRN3-210ENST00000492909 SYT15Q9BQS2 421 aa14.9□□□□□ -0.02
PDZRN3-210ENST00000492909 CTTNBP2NLQ9P2B4 639 aa14.9□□□□□ -0.02
PDZRN3-210ENST00000492909 CNOT8Q9UFF9 292 aaKnown RBP14.9□□□□□ -0.02
PDZRN3-210ENST00000492909 CDH9Q9ULB4 789 aa14.9□□□□□ -0.02
PDZRN3-210ENST00000492909 VWA8A3KMH1 1905 aa14.9□□□□□ -0.02
PDZRN3-210ENST00000492909 ZBBXA8MT70 800 aa14.9□□□□□ -0.02
PDZRN3-210ENST00000492909 ATMINO43313 823 aaPredicted RBP14.9□□□□□ -0.02
PDZRN3-210ENST00000492909 ATP2C2O75185 946 aa14.9□□□□□ -0.02
PDZRN3-210ENST00000492909 CALB1P05937 261 aa14.9□□□□□ -0.02
PDZRN3-210ENST00000492909 CCDC130P13994 396 aa14.9□□□□□ -0.02
PDZRN3-210ENST00000492909 GPD2P43304 727 aa14.9□□□□□ -0.02
PDZRN3-210ENST00000492909 ALDH7A1P49419 539 aaKnown RBP14.9□□□□□ -0.02
PDZRN3-210ENST00000492909 TCEAL1Q15170 157 aa14.9□□□□□ -0.02
PDZRN3-210ENST00000492909 PRPF38BQ5VTL8 546 aaKnown RBP14.9□□□□□ -0.02
PDZRN3-210ENST00000492909 FAM117BQ6P1L5 589 aa14.9□□□□□ -0.02
PDZRN3-210ENST00000492909 TMCO3Q6UWJ1 677 aa14.9□□□□□ -0.02
PDZRN3-210ENST00000492909 ERICH1Q86X53 443 aa14.9□□□□□ -0.02
PDZRN3-210ENST00000492909 THEM5Q8N1Q8 247 aa14.9□□□□□ -0.02
PDZRN3-210ENST00000492909 GPR161Q8N6U8 529 aaKnown RBP14.9□□□□□ -0.02
PDZRN3-210ENST00000492909 UBA3Q8TBC4 463 aa14.9□□□□□ -0.02
PDZRN3-210ENST00000492909 CALR3Q96L12 384 aaKnown RBP14.9□□□□□ -0.02
PDZRN3-210ENST00000492909 LPIN3Q9BQK8 851 aa14.9□□□□□ -0.02
PDZRN3-210ENST00000492909 ACBD6Q9BR61 282 aa14.9□□□□□ -0.02
PDZRN3-210ENST00000492909 OSGEPQ9NPF4 335 aa14.9□□□□□ -0.02
PDZRN3-210ENST00000492909 AVENQ9NQS1 362 aaPredicted RBP14.9□□□□□ -0.02
PDZRN3-210ENST00000492909 CXXC1Q9P0U4 656 aaPredicted RBP14.9□□□□□ -0.02
PDZRN3-210ENST00000492909 COLQQ9Y215 455 aaPredicted RBP14.9□□□□□ -0.02
PDZRN3-210ENST00000492909 PCDHGC5Q9Y5F6 944 aa14.9□□□□□ -0.02
PDZRN3-210ENST00000492909 SF3B1O75533 1304 aaKnown RBP eCLIP14.9□□□□□ -0.02
PDZRN3-210ENST00000492909 SYN3O14994 580 aa14.89□□□□□ -0.03
PDZRN3-210ENST00000492909 ATP8B1O43520 1251 aa14.89□□□□□ -0.03
PDZRN3-210ENST00000492909 RRM1P23921 792 aa14.89□□□□□ -0.03
PDZRN3-210ENST00000492909 ADORA2BP29275 332 aa14.89□□□□□ -0.03
PDZRN3-210ENST00000492909 BCAT1P54687 386 aa14.89□□□□□ -0.03
PDZRN3-210ENST00000492909 HADHBP55084 474 aaKnown RBP14.89□□□□□ -0.03
PDZRN3-210ENST00000492909 BCAR1P56945 870 aa14.89□□□□□ -0.03
PDZRN3-210ENST00000492909 YWHAHQ04917 246 aaPredicted RBP14.89□□□□□ -0.03
PDZRN3-210ENST00000492909 ELAVL2Q12926 359 aaKnown RBP14.89□□□□□ -0.03
PDZRN3-210ENST00000492909 PTP4A2Q12974 167 aa14.89□□□□□ -0.03
PDZRN3-210ENST00000492909 TUBB2AQ13885 445 aa14.89□□□□□ -0.03
PDZRN3-210ENST00000492909 PKDCCQ504Y2 493 aa14.89□□□□□ -0.03
PDZRN3-210ENST00000492909 C2CD6Q53TS8 623 aa14.89□□□□□ -0.03
PDZRN3-210ENST00000492909 KIAA0319Q5VV43 1072 aa14.89□□□□□ -0.03
PDZRN3-210ENST00000492909 PSRC1Q6PGN9 363 aaPredicted RBP14.89□□□□□ -0.03
PDZRN3-210ENST00000492909 TMCO2Q7Z6W1 182 aaPredicted RBP14.89□□□□□ -0.03
PDZRN3-210ENST00000492909 TTC30AQ86WT1 665 aa14.89□□□□□ -0.03
PDZRN3-210ENST00000492909 TPCN2Q8NHX9 752 aa14.89□□□□□ -0.03
PDZRN3-210ENST00000492909 SLC2A14Q8TDB8 520 aa14.89□□□□□ -0.03
PDZRN3-210ENST00000492909 HNRNPABQ99729 332 aaKnown RBP14.89□□□□□ -0.03
PDZRN3-210ENST00000492909 TUBB2BQ9BVA1 445 aa14.89□□□□□ -0.03
PDZRN3-210ENST00000492909 NUP85Q9BW27 656 aa14.89□□□□□ -0.03
PDZRN3-210ENST00000492909 PRO3102Q9H379 93 aa14.89□□□□□ -0.03
PDZRN3-210ENST00000492909 CWH43Q9H720 699 aa14.89□□□□□ -0.03
PDZRN3-210ENST00000492909 RC3H2Q9HBD1 1191 aaKnown RBP14.89□□□□□ -0.03
PDZRN3-210ENST00000492909 CRTAC1Q9NQ79 661 aa14.89□□□□□ -0.03
PDZRN3-210ENST00000492909 MARCH5Q9NX47 278 aa14.89□□□□□ -0.03
PDZRN3-210ENST00000492909 UVRAGQ9P2Y5 699 aa14.89□□□□□ -0.03
PDZRN3-210ENST00000492909 CYTH4Q9UIA0 394 aa14.89□□□□□ -0.03
PDZRN3-210ENST00000492909 CTAGE9A4FU28 777 aa14.88□□□□□ -0.03
PDZRN3-210ENST00000492909 NT5C1B-RDH14C9J2C7 533 aa14.88□□□□□ -0.03
PDZRN3-210ENST00000492909 SETSIPP0DME0 302 aa14.88□□□□□ -0.03
PDZRN3-210ENST00000492909 TKTP29401 623 aaKnown RBP14.88□□□□□ -0.03
PDZRN3-210ENST00000492909 PBX3P40426 434 aa14.88□□□□□ -0.03
PDZRN3-210ENST00000492909 PDCLQ13371 301 aa14.88□□□□□ -0.03
PDZRN3-210ENST00000492909 BTG3Q14201 252 aaPredicted RBP14.88□□□□□ -0.03
PDZRN3-210ENST00000492909 PTPN20Q4JDL3 420 aa14.88□□□□□ -0.03
PDZRN3-210ENST00000492909 MDH1BQ5I0G3 518 aa14.88□□□□□ -0.03
PDZRN3-210ENST00000492909 CMTR2Q8IYT2 770 aaKnown RBP14.88□□□□□ -0.03
PDZRN3-210ENST00000492909 ANKRD52Q8NB46 1076 aa14.88□□□□□ -0.03
PDZRN3-210ENST00000492909 GOLGA1Q92805 767 aa14.88□□□□□ -0.03
PDZRN3-210ENST00000492909 RTP3Q9BQQ7 232 aa14.88□□□□□ -0.03
PDZRN3-210ENST00000492909 STRIP2Q9ULQ0 834 aa14.88□□□□□ -0.03
PDZRN3-210ENST00000492909 PALMO75781 387 aa14.88□□□□□ -0.03
PDZRN3-210ENST00000492909 MTA2O94776 668 aa14.88□□□□□ -0.03
PDZRN3-210ENST00000492909 OAZ2O95190 189 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms